Information on Organism Vibrio sp. - BRENDA Enzyme Database

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preliminary BRENDA-supplied EC number

EC 3.2.1.14

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EC 3.2.1.32

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EC 3.2.1.B47

preliminary BRENDA-supplied EC number

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(1,3)-beta-D-xylan degradation

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PWY-6789

(aminomethyl)phosphonate degradation

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PWY-7805

(R,R)-butanediol biosynthesis

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PWY-5951

(R,R)-butanediol degradation

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PWY3O-246

1-butanol autotrophic biosynthesis (engineered)

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PWY-6886

2-arachidonoylglycerol biosynthesis

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PWY-8052

2-nitrotoluene degradation

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PWY-5641

3,6-anhydro-alpha-L-galactopyranose degradation

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PWY-7562

4-hydroxymandelate degradation

ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide

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PWY-7832

acetoin degradation

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adenine and adenosine salvage I

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P121-PWY

adenine and adenosine salvage II

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PWY-6605

adenine salvage

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PWY-6610

aerobic toluene degradation

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agarose degradation

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PWY-6816

Alanine, aspartate and glutamate metabolism

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00250

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alginate degradation

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PWY-6986

Amino sugar and nucleotide sugar metabolism

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00520

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Aminobenzoate degradation

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00627

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ammonia assimilation cycle III

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AMMASSIM-PWY

ammonia oxidation II (anaerobic)

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P303-PWY

Arginine and proline metabolism

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00330

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Arginine biosynthesis

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00220

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aspartate and asparagine metabolism

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ATP biosynthesis

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PWY-7980

bacterial bioluminescence

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PWY-7723

Benzoate degradation

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00362

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beta-(1,4)-mannan degradation

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PWY-7456

beta-Alanine metabolism

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00410

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Bifidobacterium shunt

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P124-PWY

Biosynthesis of 12-, 14- and 16-membered macrolides

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00522

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Biosynthesis of secondary metabolites

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01110

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Biosynthesis of unsaturated fatty acids

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01040

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Brassinosteroid biosynthesis

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00905

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Butanoate metabolism

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00650

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butanol and isobutanol biosynthesis (engineered)

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PWY-7396

C5-Branched dibasic acid metabolism

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00660

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Calvin-Benson-Bassham cycle

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CALVIN-PWY

Carbon fixation in photosynthetic organisms

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00710

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Carbon fixation pathways in prokaryotes

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00720

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catechol degradation to 2-hydroxypentadienoate I

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P183-PWY

catechol degradation to 2-hydroxypentadienoate II

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PWY-5419

cellulose degradation

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cellulose degradation II (fungi)

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PWY-6788

chitin degradation I (archaea)

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PWY-6855

chitin degradation II (Vibrio)

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PWY-6902

chitin degradation III (Serratia)

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PWY-7822

Chlorocyclohexane and chlorobenzene degradation

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00361

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Citrate cycle (TCA cycle)

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00020

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citric acid cycle

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cutin biosynthesis

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PWY-321

Cyanoamino acid metabolism

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00460

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cytosolic NADPH production (yeast)

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PWY-7268

D-Amino acid metabolism

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00470

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d-mannose degradation

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d-xylose degradation

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D-xylose degradation I

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XYLCAT-PWY

degradation of sugar alcohols

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denitrification

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diethylphosphate degradation

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PWY-5491

Drug metabolism - other enzymes

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00983

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Entner-Doudoroff pathway I

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PWY-8004

Entner-Doudoroff pathway II (non-phosphorylative)

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NPGLUCAT-PWY

Entner-Doudoroff pathway III (semi-phosphorylative)

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PWY-2221

erythromycin D biosynthesis

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PWY-7106

ethanol degradation IV

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PWY66-162

ethene biosynthesis III (microbes)

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PWY-6854

ethene biosynthesis V (engineered)

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PWY-7124

Ether lipid metabolism

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00565

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Fatty acid elongation

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00062

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Folate biosynthesis

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00790

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formaldehyde assimilation I (serine pathway)

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PWY-1622

formaldehyde assimilation III (dihydroxyacetone cycle)

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P185-PWY

fructan degradation

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PWY-862

Fructose and mannose metabolism

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00051

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ganglio-series glycosphingolipids biosynthesis

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PWY-7836

gluconeogenesis I

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GLUCONEO-PWY

gluconeogenesis II (Methanobacterium thermoautotrophicum)

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PWY-6142

gluconeogenesis III

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PWY66-399

glutamate and glutamine metabolism

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glutaminyl-tRNAgln biosynthesis via transamidation

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PWY-5921

Glutathione metabolism

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00480

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glutathione metabolism

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glycerol degradation to butanol

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PWY-7003

Glycerolipid metabolism

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00561

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Glycerophospholipid metabolism

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00564

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glycogen metabolism

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glycolysis

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Glycolysis / Gluconeogenesis

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00010

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glycolysis I (from glucose 6-phosphate)

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GLYCOLYSIS

glycolysis II (from fructose 6-phosphate)

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PWY-5484

glycolysis III (from glucose)

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ANAGLYCOLYSIS-PWY

glycolysis IV

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PWY-1042

glycolysis V (Pyrococcus)

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P341-PWY

Glycosphingolipid biosynthesis - ganglio series

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00604

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Glycosphingolipid biosynthesis - globo and isoglobo series

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00603

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Glyoxylate and dicarboxylate metabolism

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00630

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glyoxylate cycle

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GLYOXYLATE-BYPASS

glyphosate degradation III

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PWY-7807

gossypol biosynthesis

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PWY-5773

heme metabolism

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heterolactic fermentation

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P122-PWY

Inositol phosphate metabolism

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00562

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isoleucine metabolism

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justicidin B biosynthesis

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PWY-6824

L-asparagine biosynthesis III (tRNA-dependent)

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PWY490-4

L-asparagine degradation I

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ASPARAGINE-DEG1-PWY

L-asparagine degradation III (mammalian)

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ASPARAGINE-DEG1-PWY-1

L-citrulline biosynthesis

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CITRULBIO-PWY

L-glutamate biosynthesis I

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GLUTSYN-PWY

L-glutamine degradation I

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GLUTAMINDEG-PWY

L-isoleucine biosynthesis I (from threonine)

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ILEUSYN-PWY

L-isoleucine biosynthesis II

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PWY-5101

L-isoleucine biosynthesis III

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PWY-5103

L-isoleucine biosynthesis IV

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PWY-5104

L-tyrosine degradation I

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TYRFUMCAT-PWY

L-valine biosynthesis

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VALSYN-PWY

leucine metabolism

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lipid metabolism

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macrolide antibiotic biosynthesis

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mandelate degradation I

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PWY-1501

matairesinol biosynthesis

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PWY-5466

Metabolic pathways

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01100

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Methane metabolism

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00680

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methanol oxidation to formaldehyde IV

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PWY-5506

methyl indole-3-acetate interconversion

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PWY-6303

methylaspartate cycle

methylsalicylate degradation

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PWY18C3-24

Microbial metabolism in diverse environments

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01120

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mixed acid fermentation

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FERMENTATION-PWY

nitrate reduction I (denitrification)

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DENITRIFICATION-PWY

nitrate reduction VII (denitrification)

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PWY-6748

nitric oxide biosynthesis II (mammals)

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PWY-4983

nitrifier denitrification

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PWY-7084

nitrite-dependent anaerobic methane oxidation

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PWY-6523

Nitrogen metabolism

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00910

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nitrogen remobilization from senescing leaves

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PWY-6549

nocardicin A biosynthesis

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PWY-7797

non-pathway related

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oleate biosynthesis II (animals and fungi)

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PWY-5996

Other glycan degradation

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00511

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Oxidative phosphorylation

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00190

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oxidative phosphorylation

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Pantothenate and CoA biosynthesis

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00770

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pantothenate biosynthesis

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partial TCA cycle (obligate autotrophs)

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PWY-5913

pectin degradation I

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PWY-7246

pectin degradation II

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PWY-7248

Penicillin and cephalosporin biosynthesis

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00311

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Pentose and glucuronate interconversions

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00040

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phenol degradation

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phospholipases

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LIPASYN-PWY

phospholipid remodeling (phosphatidylethanolamine, yeast)

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PWY-7409

phosphopantothenate biosynthesis I

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PANTO-PWY

Photosynthesis

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00195

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photosynthesis

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photosynthetic 3-hydroxybutanoate biosynthesis (engineered)

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PWY-7218

plasmalogen biosynthesis I (aerobic)

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PWY-7782

plasmalogen degradation

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PWY-7783

porphyran degradation

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PWY-6815

Porphyrin and chlorophyll metabolism

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00860

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ppGpp biosynthesis

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ppGpp metabolism

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PPGPPMET-PWY

Purine metabolism

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00230

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purine metabolism

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pyrimidine deoxyribonucleosides salvage

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PWY-7199

Pyrimidine metabolism

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00240

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pyrimidine metabolism

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pyruvate fermentation to (R)-acetoin I

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PWY-5938

pyruvate fermentation to (R)-acetoin II

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PWY-5939

pyruvate fermentation to (S)-acetoin

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PWY-6389

pyruvate fermentation to isobutanol (engineered)

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PWY-7111

reactive oxygen species degradation

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DETOX1-PWY-1

reductive TCA cycle I

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P23-PWY

retinol biosynthesis

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PWY-6857

Rubisco shunt

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PWY-5723

sesamin biosynthesis

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PWY-5469

sporopollenin precursors biosynthesis

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PWY-6733

Starch and sucrose metabolism

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00500

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starch degradation

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stearate biosynthesis I (animals)

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PWY-5972

stearate biosynthesis III (fungi)

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PWY3O-355

Styrene degradation

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00643

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suberin monomers biosynthesis

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PWY-1121

sucrose degradation V (sucrose alpha-glucosidase)

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PWY66-373

sulfopterin metabolism

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superoxide radicals degradation

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DETOX1-PWY

superpathway of glucose and xylose degradation

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PWY-6901

superpathway of L-aspartate and L-asparagine biosynthesis

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ASPASN-PWY

superpathway of methylsalicylate metabolism

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PWY18C3-25

TCA cycle I (prokaryotic)

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TCA

TCA cycle II (plants and fungi)

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PWY-5690

TCA cycle III (animals)

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PWY66-398

TCA cycle IV (2-oxoglutarate decarboxylase)

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P105-PWY

TCA cycle V (2-oxoglutarate synthase)

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PWY-6969

TCA cycle VI (Helicobacter)

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REDCITCYC

TCA cycle VII (acetate-producers)

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PWY-7254

tetrapyrrole biosynthesis I (from glutamate)

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PWY-5188

tetrapyrrole biosynthesis II (from glycine)

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PWY-5189

Thiamine metabolism

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00730

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toluene degradation II (aerobic) (via 4-methylcatechol)

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TOLUENE-DEG-3-OH-PWY

toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)

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TOLUENE-DEG-DIOL-PWY

toluene degradation to 2-hydroxypentadienoate I (via o-cresol)

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TOLUENE-DEG-2-OH-PWY

triacylglycerol degradation

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LIPAS-PWY

tRNA processing

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PWY0-1479

Tryptophan metabolism

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00380

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tryptophan metabolism

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Tyrosine metabolism

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00350

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tyrosine metabolism

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UMP biosynthesis I

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PWY-5686

UMP biosynthesis II

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PWY-7790

UMP biosynthesis III

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PWY-7791

valine metabolism

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Valine, leucine and isoleucine biosynthesis

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00290

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Xylene degradation

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95193, 664733, 679376

C4TJD2, C4TJD3, C4TJD4

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5622

705481

NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

: 159164