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Information on Organism Escherichia coli JM101

Synonyms:
Escherichia coli JM101;
TaxTree of Organism Escherichia coli JM101
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cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Gammaproteobacteria can be found in Brenda BRENDA pathways(class)
Enterobacterales can be found in Brenda BRENDA pathways(order)
Enterobacteriaceae can be found in Brenda BRENDA pathways(family)
Escherichia can be found in Brenda BRENDA pathways(genus)
Escherichia coli can be found in Brenda BRENDA pathways(species)
Escherichia coli JM101 can be found in Brenda
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
1,3-dimethylbenzene degradation to 3-methylbenzoate
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PWY-5428
1,4-dimethylbenzene degradation to 4-methylbenzoate
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PWY-5429
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
2,2'-dihydroxybiphenyl degradation
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PWY-7009
2,5-xylenol and 3,5-xylenol degradation
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PWY-7698
2-hydroxybiphenyl degradation
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PWY-7008
3-chlorotoluene degradation II
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PWY-6104
8-amino-7-oxononanoate biosynthesis I
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PWY-6519
adenosine ribonucleotides de novo biosynthesis
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PWY-7219
aerobic toluene degradation
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alpha-linolenate metabolites biosynthesis
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PWY-8398
alpha-Linolenic acid metabolism
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Amino sugar and nucleotide sugar metabolism
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ammonia oxidation II (anaerobic)
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P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
astaxanthin biosynthesis (bacteria, fungi, algae)
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PWY-5288
bacilysin biosynthesis
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PWY-7626
Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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Biotin metabolism
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brassicicene C biosynthesis
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PWY-7517
C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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Carotenoid biosynthesis
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carotenoid biosynthesis
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chorismate metabolism
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Citrate cycle (TCA cycle)
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citric acid cycle
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denitrification
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divinyl ether biosynthesis II
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PWY-5409
Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ethanol degradation IV
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PWY66-162
ethene biosynthesis III (microbes)
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PWY-6854
flexixanthin biosynthesis
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PWY-7947
fusicoccin A biosynthesis
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PWY-6659
Galactose metabolism
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geranylgeranyl diphosphate biosynthesis
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PWY-5120
glycerol degradation to butanol
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PWY-7003
glycogen metabolism
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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Glyoxylate and dicarboxylate metabolism
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heterolactic fermentation
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P122-PWY
isoprenoid biosynthesis
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jasmonic acid biosynthesis
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PWY-735
L-phenylalanine biosynthesis I
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PHESYN
L-phenylalanine biosynthesis II
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PWY-3462
L-tyrosine biosynthesis I
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TYRSYN
L-tyrosine biosynthesis II
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PWY-3461
L-tyrosine biosynthesis III
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PWY-6120
linoleate metabolites biosynthesis
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PWY-8395
Linoleic acid metabolism
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m-cresol degradation
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M-CRESOL-DEGRADATION-PWY
manganese oxidation I
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PWY-6591
Metabolic pathways
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metabolism of disaccharids
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methanol oxidation to formaldehyde IV
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PWY-5506
methyl phomopsenoate biosynthesis
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PWY-7721
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
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PWY-6748
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
Nitrogen metabolism
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nitrogen remobilization from senescing leaves
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PWY-6549
non-pathway related
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ophiobolin F biosynthesis
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PWY-7720
Other glycan degradation
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oxalate degradation IV
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PWY-6697
paspaline biosynthesis
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PWY-7492
Penicillin and cephalosporin biosynthesis
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Peptidoglycan biosynthesis
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peptidoglycan biosynthesis
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peptidoglycan biosynthesis II (staphylococci)
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PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
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PWY-6471
peptidoglycan maturation (meso-diaminopimelate containing)
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PWY0-1586
Phenylalanine metabolism
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phenylalanine metabolism
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Phenylalanine, tyrosine and tryptophan biosynthesis
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photosynthesis
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photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
plaunotol biosynthesis
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PWY-6691
Purine metabolism
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purine metabolism
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pyrimidine deoxyribonucleotides dephosphorylation
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PWY-7206
Pyrimidine metabolism
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pyrimidine metabolism
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Pyruvate metabolism
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quinate degradation II
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PWY-6416
reactive oxygen species degradation
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DETOX1-PWY-1
Rubisco shunt
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PWY-5723
salicin biosynthesis
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PWY-6766
salicortin biosynthesis
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PWY-6763
salinosporamide A biosynthesis
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PWY-6627
Sphingolipid metabolism
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Starch and sucrose metabolism
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starch degradation
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stellatic acid biosynthesis
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PWY-7736
styrene degradation
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PWY-6941
Styrene degradation
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superoxide radicals degradation
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DETOX1-PWY
superpathway of glucose and xylose degradation
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PWY-6901
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
Terpenoid backbone biosynthesis
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Thiamine metabolism
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Toluene degradation
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toluene degradation to benzoate
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TOLUENE-DEG-CATECHOL-PWY
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
tRNA processing
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PWY0-1479
Tryptophan metabolism
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Tyrosine metabolism
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Xylene degradation
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xyloglucan degradation II (exoglucanase)
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PWY-6807
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ORGANISM
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LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
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LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Escherichia coli JM101)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA