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Information on Organism Thermus caldophilus

Synonyms:
Thermus aquaticus caldophilus; Thermus aquaticus (SUBSP. CALDOPHILUS); Thermus caldophilus; "Thermus caldophilus" Taguchi et al. 1983;
Word Map for Organism Thermus caldophilus
TaxTree of Organism Thermus caldophilus
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Deinococcus-Thermus can be found in Brenda BRENDA pathways(phylum)
Deinococci can be found in Brenda BRENDA pathways(class)
Thermales can be found in Brenda BRENDA pathways(order)
Thermaceae can be found in Brenda BRENDA pathways(family)
Thermus can be found in Brenda BRENDA pathways(genus)
Thermus caldophilus can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
1,3-propanediol biosynthesis (engineered)
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PWY-7385
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
Acarbose and validamycin biosynthesis
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alanine metabolism
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Alanine, aspartate and glutamate metabolism
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alpha-tomatine degradation
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PWY18C3-5
Amino sugar and nucleotide sugar metabolism
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Ascorbate and aldarate metabolism
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beta-D-glucuronide and D-glucuronate degradation
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PWY-7247
Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C5-Branched dibasic acid metabolism
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Calvin-Benson-Bassham cycle
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CALVIN-PWY
Carbon fixation in photosynthetic organisms
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cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
chitin derivatives degradation
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PWY-6906
coumarin biosynthesis (via 2-coumarate)
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PWY-5176
Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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D-Amino acid metabolism
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D-galactosamine and N-acetyl-D-galactosamine degradation
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PWY-7395
D-galactose detoxification
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PWY-3821
d-xylose degradation
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D-xylose degradation I
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XYLCAT-PWY
degradation of hexoses
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degradation of sugar acids
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Drug metabolism - other enzymes
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dTDP-3-acetamido-3,6-dideoxy-alpha-D-glucose biosynthesis
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PWY-7318
dTDP-3-acetamido-alpha-D-fucose biosynthesis
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PWY-6953
dTDP-4-O-demethyl-beta-L-noviose biosynthesis
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PWY-7301
dTDP-6-deoxy-alpha-D-allose biosynthesis
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PWY-7413
dTDP-alpha-D-forosamine biosynthesis
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PWY-6808
dTDP-alpha-D-mycaminose biosynthesis
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PWY-7414
dTDP-alpha-D-olivose, dTDP-alpha-D-oliose and dTDP-alpha-D-mycarose biosynthesis
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PWY-6973
dTDP-alpha-D-ravidosamine and dTDP-4-acetyl-alpha-D-ravidosamine biosynthesis
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PWY-7688
dTDP-beta-D-fucofuranose biosynthesis
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PWY-7312
dTDP-beta-L-4-epi-vancosamine biosynthesis
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PWY-7440
dTDP-beta-L-digitoxose biosynthesis
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PWY-7657
dTDP-beta-L-megosamine biosynthesis
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PWY-7104
dTDP-beta-L-mycarose biosynthesis
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PWY-6976
dTDP-beta-L-olivose biosynthesis
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PWY-6974
dTDP-beta-L-rhamnose biosynthesis
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DTDPRHAMSYN-PWY
dTDP-D-desosamine biosynthesis
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PWY-6942
dTDP-L-daunosamine biosynthesis
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PWY-7814
dTDP-N-acetylthomosamine biosynthesis
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PWY-7315
dTDP-N-acetylviosamine biosynthesis
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PWY-7316
dTDP-sibirosamine biosynthesis
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PWY-8380
dTDPLrhamnose biosynthesis
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Entner-Doudoroff pathway I
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PWY-8004
firefly bioluminescence
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PWY-7913
Flavone and flavonol biosynthesis
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formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
Fructose and mannose metabolism
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Galactose metabolism
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GDP-alpha-D-glucose biosynthesis
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PWY-5661
ginsenoside metabolism
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gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glucose and glucose-1-phosphate degradation
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GLUCOSE1PMETAB-PWY
glucosylglycerol biosynthesis
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PWY-7902
glycerol degradation to butanol
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PWY-7003
Glycerolipid metabolism
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glycogen biosynthesis
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glycogen biosynthesis I (from ADP-D-Glucose)
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GLYCOGENSYNTH-PWY
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
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PWY-7900
glycogen degradation I
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GLYCOCAT-PWY
glycogen degradation II
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PWY-5941
glycogen metabolism
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glycosaminoglycan degradation
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heterolactic fermentation
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P122-PWY
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation IV
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PWY1-2
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-histidine degradation V
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PWY-5031
L-lactaldehyde degradation
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lactate fermentation
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leucine metabolism
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linamarin degradation
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PWY-3121
linustatin bioactivation
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PWY-7091
lipid A biosynthesis
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lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing)
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PWY2B4Q-4
lipid IVA biosynthesis (E. coli)
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NAGLIPASYN-PWY
lipid IVA biosynthesis (generic)
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PWY-8283
lipid IVA biosynthesis (H. pylori)
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PWYI-14
lipid IVA biosynthesis (P. gingivalis)
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PWY-8245
lipid IVA biosynthesis (P. putida)
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PWY-8073
lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor)
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PWY2G6Z-2
Lipopolysaccharide biosynthesis
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lotaustralin degradation
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PWY-6002
luteolin triglucuronide degradation
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PWY-7445
macrolide antibiotic biosynthesis
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Metabolic pathways
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metabolism of amino sugars and derivatives
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metabolism of disaccharids
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Methane metabolism
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Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
mucin core 3 and core 4 O-glycosylation
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PWY-7435
Mucin type O-glycan biosynthesis
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N-acetyl-D-galactosamine degradation
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PWY-7077
N-acetylglucosamine degradation I
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GLUAMCAT-PWY
neolinustatin bioactivation
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PWY-7092
Neomycin, kanamycin and gentamicin biosynthesis
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O-Antigen nucleotide sugar biosynthesis
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Pentose and glucuronate interconversions
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Pentose phosphate pathway
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pentose phosphate pathway (non-oxidative branch) II
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PWY-8178
Peptidoglycan biosynthesis
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peptidoglycan biosynthesis
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peptidoglycan recycling I
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PWY0-1261
Phenylpropanoid biosynthesis
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photosynthesis
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Polyketide sugar unit biosynthesis
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Porphyrin and chlorophyll metabolism
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Propanoate metabolism
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pyruvate fermentation to (R)-lactate
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PWY-8274
pyruvate fermentation to (S)-lactate
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PWY-5481
Pyruvate metabolism
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sedoheptulose bisphosphate bypass
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PWY0-1517
stachyose degradation
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PWY-6527
Starch and sucrose metabolism
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starch biosynthesis
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PWY-622
starch degradation
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starch degradation I
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PWY-842
starch degradation III
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PWY-6731
starch degradation V
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PWY-6737
Streptomycin biosynthesis
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sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sucrose biosynthesis II
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PWY-7238
sucrose degradation II (sucrose synthase)
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PWY-3801
sucrose degradation III (sucrose invertase)
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PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
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PWY66-373
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
Taurine and hypotaurine metabolism
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trehalose biosynthesis IV
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PWY-2622
trehalose degradation I (low osmolarity)
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TREDEGLOW-PWY
trehalose degradation II (cytosolic)
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PWY0-1182
trehalose degradation IV
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PWY-2722
trehalose degradation V
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PWY-2723
type I lipoteichoic acid biosynthesis (S. aureus)
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PWY-7817
UDP-alpha-D-glucose biosynthesis
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PWY-7343
UDP-GlcNAc biosynthesis
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UDP-N-acetyl-D-galactosamine biosynthesis II
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PWY-5514
UDP-N-acetyl-D-glucosamine biosynthesis I
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UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
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UDPNACETYLGALSYN-PWY
UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
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PWY-6387
UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
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PWY-6386
UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing)
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PWY-7953
Valine, leucine and isoleucine biosynthesis
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vancomycin resistance I
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PWY-6454
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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LINKS TO OTHER DATABASES (specific for Thermus caldophilus)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA