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Information on Organism Paracoccus denitrificans PD1222

Synonyms:
Paracoccus denitrificans PD1222; Paracoccus denitrificans Pd 1222;
TaxTree of Organism Paracoccus denitrificans PD1222
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cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Alphaproteobacteria can be found in Brenda BRENDA pathways(class)
Rhodobacterales can be found in Brenda BRENDA pathways(order)
Rhodobacteraceae can be found in Brenda BRENDA pathways(family)
Paracoccus can be found in Brenda BRENDA pathways(genus)
Paracoccus denitrificans can be found in Brenda BRENDA pathways(species)
Paracoccus denitrificans PD1222 can be found in Brenda BRENDA pathways(strain)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
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PWY-7726
(8E,10E)-dodeca-8,10-dienol biosynthesis
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PWY-7654
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
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PWY-7216
(S)-propane-1,2-diol degradation
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PWY-7013
(S)-reticuline biosynthesis I
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PWY-3581
10-cis-heptadecenoyl-CoA degradation (yeast)
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PWY-7337
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
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PWY-7339
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
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PWY-7338
2-deoxy-D-ribose degradation II
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PWY-8058
2-methyl-branched fatty acid beta-oxidation
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PWY-8181
2-methylpropene degradation
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PWY-7778
3-(4-hydroxyphenyl)pyruvate biosynthesis
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PWY-5886
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
3-methylbutanol biosynthesis (engineered)
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PWY-6871
3-phenylpropanoate degradation
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P281-PWY
4-ethylphenol degradation (anaerobic)
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PWY-6080
4-hydroxybenzoate biosynthesis I (eukaryotes)
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PWY-5754
4-hydroxybenzoate biosynthesis III (plants)
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PWY-6435
4-oxopentanoate degradation
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PWY-7948
5,6-dimethylbenzimidazole biosynthesis I (aerobic)
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PWY-5523
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
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PWY-7340
acetaldehyde biosynthesis I
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PWY-6333
acetoacetate degradation (to acetyl CoA)
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ACETOACETATE-DEG-PWY
acetyl-CoA fermentation to butanoate
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PWY-5676
acetylene degradation (anaerobic)
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P161-PWY
alpha-Linolenic acid metabolism
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ammonia oxidation II (anaerobic)
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P303-PWY
androstenedione degradation I (aerobic)
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PWY-6944
androstenedione degradation II (anaerobic)
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PWY-8152
atromentin biosynthesis
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PWY-7518
bacterial bioluminescence
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PWY-7723
benzoate biosynthesis I (CoA-dependent, beta-oxidative)
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PWY-6443
Benzoate degradation
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benzoyl-CoA biosynthesis
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PWY-6458
Biosynthesis of secondary metabolites
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Biosynthesis of unsaturated fatty acids
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
Chloroalkane and chloroalkene degradation
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cholesterol degradation to androstenedione I (cholesterol oxidase)
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PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
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PWY-6946
crotonate fermentation (to acetate and cyclohexane carboxylate)
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PWY-7401
Cysteine and methionine metabolism
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denitrification
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docosahexaenoate biosynthesis III (6-desaturase, mammals)
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PWY-7606
Drug metabolism - cytochrome P450
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ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol fermentation
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ethanolamine utilization
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PWY0-1477
Ethylbenzene degradation
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ethylbenzene degradation (anaerobic)
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PWY-481
ethylmalonyl-CoA pathway
fatty acid beta-oxidation I (generic)
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FAO-PWY
fatty acid beta-oxidation II (plant peroxisome)
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PWY-5136
fatty acid beta-oxidation VI (mammalian peroxisome)
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PWY66-391
fatty acid beta-oxidation VII (yeast peroxisome)
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PWY-7288
Fatty acid degradation
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Fatty acid elongation
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fatty acid salvage
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PWY-7094
Geraniol degradation
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glutaryl-CoA degradation
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PWY-5177
Glycine, serine and threonine metabolism
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Glycolysis / Gluconeogenesis
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Glyoxylate and dicarboxylate metabolism
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heterolactic fermentation
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P122-PWY
hypotaurine degradation
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PWY-7387
isoprene biosynthesis II (engineered)
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PWY-7391
isopropanol biosynthesis (engineered)
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PWY-6876
Isoquinoline alkaloid biosynthesis
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jasmonic acid biosynthesis
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PWY-735
ketogenesis
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PWY66-367
ketolysis
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PWY66-368
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-isoleucine degradation I
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ILEUDEG-PWY
L-isoleucine degradation II
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PWY-5078
L-leucine degradation I
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LEU-DEG2-PWY
L-leucine degradation III
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PWY-5076
L-lysine fermentation to acetate and butanoate
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P163-PWY
L-methionine degradation III
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PWY-5082
L-phenylalanine biosynthesis I
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PHESYN
L-phenylalanine biosynthesis III (cytosolic, plants)
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PWY-7432
L-phenylalanine degradation II (anaerobic)
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ANAPHENOXI-PWY
L-phenylalanine degradation III
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PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
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PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
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PWY-8014
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine biosynthesis I
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TYRSYN
L-tyrosine degradation I
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TYRFUMCAT-PWY
L-tyrosine degradation II
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PWY-5151
L-tyrosine degradation III
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PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
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PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
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PWY-8016
L-valine degradation II
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PWY-5057
leucine metabolism
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lipid metabolism
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Lysine biosynthesis
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Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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methionine metabolism
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methyl tert-butyl ether degradation
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PWY-7779
mevalonate pathway I (eukaryotes and bacteria)
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PWY-922
mevalonate pathway II (haloarchaea)
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PWY-6174
mevalonate pathway III (Thermoplasma)
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PWY-7524
mevalonate pathway IV (archaea)
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PWY-8125
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
Naphthalene degradation
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nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
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PWY-381
nitrate reduction III (dissimilatory)
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PWY0-1321
nitrate reduction IV (dissimilatory)
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PWY-5674
nitrate reduction IX (dissimilatory)
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PWY0-1581
nitrate reduction VII (denitrification)
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PWY-6748
nitrate reduction VIII (dissimilatory)
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PWY0-1352
nitrate reduction VIIIb (dissimilatory)
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PWY0-1573
nitrate reduction X (dissimilatory, periplasmic)
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PWY0-1584
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
Nitrogen metabolism
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noradrenaline and adrenaline degradation
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PWY-6342
Novobiocin biosynthesis
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oleate beta-oxidation
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PWY0-1337
Phenylalanine metabolism
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phenylalanine metabolism
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Phenylalanine, tyrosine and tryptophan biosynthesis
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phenylethanol biosynthesis
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PWY-5751
Photosynthesis
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photosynthesis light reactions
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PWY-101
phytol degradation
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PWY66-389
platensimycin biosynthesis
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PWY-8179
polyhydroxybutanoate biosynthesis
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PWY1-3
proline betaine degradation I
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P561-PWY
propanoate fermentation to 2-methylbutanoate
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PWY-5109
propanol degradation
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pyruvate fermentation to acetone
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PWY-6588
pyruvate fermentation to butanoate
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CENTFERM-PWY
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to butanol II (engineered)
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PWY-6883
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to hexanol (engineered)
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PWY-6863
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
Pyruvate metabolism
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Retinol metabolism
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Riboflavin metabolism
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rosmarinic acid biosynthesis I
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PWY-5048
salidroside biosynthesis
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PWY-6802
serotonin degradation
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PWY-6313
serotonin metabolism
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sitosterol degradation to androstenedione
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PWY-6948
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
Taurine and hypotaurine metabolism
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taurine degradation I
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PWY-1263
tropane alkaloids biosynthesis
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PWY-5317
Tropane, piperidine and pyridine alkaloid biosynthesis
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Tyrosine metabolism
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tyrosine metabolism
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valine metabolism
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Valine, leucine and isoleucine degradation
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valproate beta-oxidation
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PWY-8182
vitamin B12 metabolism
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LINKS TO OTHER DATABASES (specific for Paracoccus denitrificans PD1222)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA