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IUBMB Comments The enzyme, which is a complex of five polyketide synthase proteins, is involved in the synthesis of the lipid core common to phthiocerols and phenolphthiocerols. The first protein, PpsA, can accept either a C18 or C20 long-chain fatty acyl, or a (4-hydroxyphenyl)-C17 or C19 fatty acyl. The substrates must first be adenylated by EC 6.2.1.59 , long-chain fatty acid adenylase/transferase FadD26, which also loads them onto PpsA. PpsA then extends them using a malonyl-CoA extender unit. The PpsB protein adds the next malonyl-CoA extender unit. The absence of a dehydratase and an enoyl reductase domains in the PpsA and PpsB modules results in the formation of the diol portion of the phthiocerol moiety. PpsC adds a third malonyl unit (releasing a water molecule due to its dehydratase domain), PpsD adds an (R )-methylmalonyl unit, releasing a water molecule, and PpsE adds a second (R )-methylmalonyl unit, without releasing a water molecule. The incorporation of the methylmalonyl units results in formation of two branched methyl groups in the elongated product. The enzyme does not contain a thioesterase domain , and release of the products requires the tesA -encoded type II thioesterase .
The enzyme appears in viruses and cellular organisms
Reaction Schemes
3
+
2
+
icosanoyl-[(phenol)carboxyphthiodiolenone synthase]
+
5
=
C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase]
+
5
+
5
+
5
+
2
3
+
2
+
docosanoyl-[(phenol)carboxyphthiodiolenone synthase]
+
5
=
C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase]
+
5
+
5
+
5
+
2
3
+
2
+
19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase]
+
5
=
C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase]
+
5
+
5
+
5
+
2
3
+
2
+
17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase]
+
5
=
C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase]
+
5
+
5
+
5
+
2
Synonyms ppsabcde, more
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phenolphthiocerol/phthiocerol polyketide synthase
phenolphthiocerol/phthiocerol polyketide synthase
-
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phenolphthiocerol/phthiocerol polyketide synthase
-
-
-
PpsA
-
-
ppsABCDE
-
-
-
-
PpsB
-
-
PpsE
-
-
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3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH = C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
(4)
-
-
-
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH = C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
(3)
-
-
-
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + docosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH = C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
(2)
-
-
-
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + icosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH = C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
(1)
-
-
-
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MetaCyc
phenolphthiocerol biosynthesis, phthiocerol biosynthesis
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(methyl)malonyl-CoA:long-chain acyl-[(phenol)carboxyphthiodiolenone synthase] (methyl)malonyltransferase {carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase]-forming}
The enzyme, which is a complex of five polyketide synthase proteins, is involved in the synthesis of the lipid core common to phthiocerols and phenolphthiocerols. The first protein, PpsA, can accept either a C18 or C20 long-chain fatty acyl, or a (4-hydroxyphenyl)-C17 or C19 fatty acyl. The substrates must first be adenylated by EC 6.2.1.59, long-chain fatty acid adenylase/transferase FadD26, which also loads them onto PpsA. PpsA then extends them using a malonyl-CoA extender unit. The PpsB protein adds the next malonyl-CoA extender unit. The absence of a dehydratase and an enoyl reductase domains in the PpsA and PpsB modules results in the formation of the diol portion of the phthiocerol moiety. PpsC adds a third malonyl unit (releasing a water molecule due to its dehydratase domain), PpsD adds an (R)-methylmalonyl unit, releasing a water molecule, and PpsE adds a second (R)-methylmalonyl unit, without releasing a water molecule. The incorporation of the methylmalonyl units results in formation of two branched methyl groups in the elongated product. The enzyme does not contain a thioesterase domain [2], and release of the products requires the tesA-encoded type II thioesterase [1].
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3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + docosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + icosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
additional information
?
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3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + docosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + docosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + icosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + icosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
additional information
?
-
-
Substrates: the enzyme shows a strict specificity for malonyl-CoA Products: -
?
additional information
?
-
-
Substrates: the PpsE protein interacts with the type II thioesterase TesA of Mycobacterium tuberculosis. FadD26 does not interact with PpsE Products: -
?
additional information
?
-
-
Substrates: the enzyme shows a strict specificity for malonyl-CoA Products: -
?
additional information
?
-
-
Substrates: the PpsE protein interacts with the type II thioesterase TesA of Mycobacterium tuberculosis. FadD26 does not interact with PpsE Products: -
?
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3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + docosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + icosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + docosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + docosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + icosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + icosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH
C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
-
Substrates: - Products: -
?
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0.0701 - 0.2386
(S)-methylmalonyl-CoA
0.1176
malonyl-CoA
-
mutant enzyme S726F, at pH 7.0 and 30°C
0.0701
(S)-methylmalonyl-CoA
-
wild type enzyme, at pH 7.0 and 30°C
0.2386
(S)-methylmalonyl-CoA
-
mutant enzyme S726F, at pH 7.0 and 30°C
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0.02 - 0.22
(S)-methylmalonyl-CoA
0.102
malonyl-CoA
-
mutant enzyme S726F, at pH 7.0 and 30°C
0.02
(S)-methylmalonyl-CoA
-
mutant enzyme S726F, at pH 7.0 and 30°C
0.22
(S)-methylmalonyl-CoA
-
wild type enzyme, at pH 7.0 and 30°C
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0.0838 - 3.1339
(S)-methylmalonyl-CoA
0.9659
malonyl-CoA
-
mutant enzyme S726F, at pH 7.0 and 30°C
0.0838
(S)-methylmalonyl-CoA
-
mutant enzyme S726F, at pH 7.0 and 30°C
3.1339
(S)-methylmalonyl-CoA
-
wild type enzyme, at pH 7.0 and 30°C
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brenda
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brenda
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brenda
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brenda
Highest Expressing Human Cell Lines
Filter by:
Cell Line Links
Gene Links
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metabolism
-
the first step of phthiocerol synthesis is catalyzed by PpsA protein. The lauroyl diketide from PpsA protein is transferred to the beta-ketoacyl ACP synthase domain of PpsB protein (formation of the diol moiety of phthiocerol). PpsE catalyzes the final step in the synthesis of phthiocerol
metabolism
-
the first step of phthiocerol synthesis is catalyzed by PpsA protein. The lauroyl diketide from PpsA protein is transferred to the beta-ketoacyl ACP synthase domain of PpsB protein (formation of the diol moiety of phthiocerol). PpsE catalyzes the final step in the synthesis of phthiocerol
-
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PPSD_MYCBO
Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
1827
0
193238
Swiss-Prot
-
PPSD_MYCTO
Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
1827
0
193315
Swiss-Prot
-
PPSD_MYCTU
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
1827
0
193315
Swiss-Prot
-
PPSE_MYCBO
Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
1488
0
158746
Swiss-Prot
-
PPSE_MYCTO
Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
1488
0
158745
Swiss-Prot
-
PPSE_MYCTU
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
1488
0
158745
Swiss-Prot
-
PPSA_MYCBO
Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
1876
0
198848
Swiss-Prot
-
PPSA_MYCTO
Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
1876
0
198860
Swiss-Prot
-
PPSA_MYCTU
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
1876
0
198835
Swiss-Prot
-
PPSB_MYCBO
Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
1538
0
162485
Swiss-Prot
-
PPSB_MYCTO
Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
1538
0
162528
Swiss-Prot
-
PPSB_MYCTU
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
1538
0
162528
Swiss-Prot
-
PPSC_MYCBO
Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
2188
0
230622
Swiss-Prot
-
PPSC_MYCTU
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
2188
0
230622
Swiss-Prot
-
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?
-
x * 163000, PpsE, SDS-PAGE
?
-
x * 170000, PpsB, SDS-PAGE
?
-
x * 200000, PpsA, SDS-PAGE
?
-
x * 64400, His-tagged PpsE protein, SDS-PAGE
?
-
x * 163000, PpsE, SDS-PAGE
-
?
-
x * 170000, PpsB, SDS-PAGE
-
?
-
x * 200000, PpsA, SDS-PAGE
-
?
-
x * 64400, His-tagged PpsE protein, SDS-PAGE
-
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S726F
-
the mutant shows 3% of wild type activity
S726F
-
the mutant shows 3% of wild type activity
-
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Ni-NTA column chromatography and Resource Q column chromatography
-
Ni-NTA resin column chromatography
-
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expressed in Bacillus subtilis BUSY8519 cells
-
expressed in Escherichia coli BL21(DE3) cells
-
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Tomita, S.; Tsuge, K.; Kikuchi, Y.; Itaya, M.
Targeted isolation of a designated region of the Bacillus subtilis genome by recombinational transfer
Appl. Environ. Microbiol.
70
2508-2513
2004
Bacillus subtilis, Bacillus subtilis 168
brenda
Trivedi, O.; Arora, P.; Vats, A.; Ansari, M.; Tickoo, R.; Sridharan, V.; Mohanty, D.; Gokhale, R.
Dissecting the mechanism and assembly of a complex virulence mycobacterial lipid
Mol. Cell.
17
631-643
2005
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
brenda
Rao, A.; Ranganathan, A.
Interaction studies on proteins encoded by the phthiocerol dimycocerosate locus of Mycobacterium tuberculosis
Mol. Genet. Genomics
272
571-579
2004
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
brenda
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