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Information on Organism Lytechinus variegatus

green sea urchin; Lytechinus variegatus (Lamarck, 1816); Lytechinus variegatus;

TaxTree of Organism Lytechinus variegatus

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cellular organisms

can be found in Brenda

BRENDA pathways

(superkingdom)

Opisthokonta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(kingdom)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(clade)

Deuterostomia can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Echinodermata can be found in Brenda

can be found in Brenda

BRENDA pathways

(phylum)

Eleutherozoa can be found in Brenda

can be found in Brenda

(clade)

can be found in Brenda

(superclass)

Echinoidea can be found in Brenda

can be found in Brenda

BRENDA pathways

(class)

Euechinoidea can be found in Brenda

can be found in Brenda

(subclass)

can be found in Brenda

BRENDA pathways

(superorder)

Temnopleuroida can be found in Brenda

can be found in Brenda

(order)

Toxopneustidae can be found in Brenda

can be found in Brenda

(family)

Lytechinus can be found in Brenda

can be found in Brenda

BRENDA pathways

(genus)

Lytechinus variegatus

can be found in Brenda

BRENDA pathways

(species)

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1,5-anhydrofructose degradation

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PWY-6992

2-arachidonoylglycerol biosynthesis

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PWY-8052

4-hydroxy-2-nonenal detoxification

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PWY-7112

acetone degradation I (to methylglyoxal)

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PWY-5451

acetone degradation III (to propane-1,2-diol)

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PWY-7466

aerobic respiration I (cytochrome c)

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PWY-3781

aerobic respiration II (cytochrome c) (yeast)

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PWY-7279

Amaryllidacea alkaloids biosynthesis

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PWY-7826

Aminobenzoate degradation

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ammonia oxidation II (anaerobic)

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P303-PWY

androstenedione degradation II (anaerobic)

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PWY-8152

Arachidonic acid metabolism

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arachidonic acid metabolism

arachidonic acid metabolism

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Arginine biosynthesis

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arsenite to oxygen electron transfer

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PWY-4521

arsenite to oxygen electron transfer (via azurin)

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PWY-7429

Ascorbate and aldarate metabolism

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Atrazine degradation

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beta-D-glucuronide and D-glucuronate degradation

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PWY-7247

Biosynthesis of secondary metabolites

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bupropion degradation

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PWY66-241

Caffeine metabolism

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camalexin biosynthesis

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CAMALEXIN-SYN

Cysteine and methionine metabolism

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cysteine metabolism

cysteine metabolism

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cytosolic NADPH production (yeast)

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PWY-7268

D-myo-inositol (1,4,5)-trisphosphate biosynthesis

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PWY-6351

D-myo-inositol-5-phosphate metabolism

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PWY-6367

degradation of sugar acids

degradation of sugar acids

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degradation of sugar alcohols

degradation of sugar alcohols

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denitrification

denitrification

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Drug metabolism - cytochrome P450

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Drug metabolism - other enzymes

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Entner-Doudoroff pathway I

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PWY-8004

ethanol degradation IV

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PWY66-162

ethene biosynthesis III (microbes)

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PWY-6854

Fatty acid degradation

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Fe(II) oxidation

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PWY-6692

Flavone and flavonol biosynthesis

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formaldehyde oxidation I

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RUMP-PWY

Galactose metabolism

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gliotoxin biosynthesis

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PWY-7533

Glutathione metabolism

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glutathione metabolism

glutathione metabolism

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glutathione-mediated detoxification I

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PWY-4061

glutathione-mediated detoxification II

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PWY-6842

Glycerophospholipid metabolism

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Glycine, serine and threonine metabolism

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Glycosaminoglycan degradation

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Glycosphingolipid biosynthesis - ganglio series

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Glyoxylate and dicarboxylate metabolism

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heme metabolism

heme metabolism

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heterolactic fermentation

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P122-PWY

homocysteine and cysteine interconversion

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PWY-801

hydrogen sulfide biosynthesis II (mammalian)

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PWY66-426

indole glucosinolate activation (intact plant cell)

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PWYQT-4477

Inositol phosphate metabolism

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L-cysteine biosynthesis III (from L-homocysteine)

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HOMOCYSDEGR-PWY

L-tyrosine degradation I

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TYRFUMCAT-PWY

Linoleic acid metabolism

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lipid metabolism

lipid metabolism

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luteolin triglucuronide degradation

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PWY-7445

melatonin degradation I

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PWY-6398

Metabolic pathways

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metabolism of disaccharids

metabolism of disaccharids

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Metabolism of xenobiotics by cytochrome P450

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methanol oxidation to formaldehyde IV

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PWY-5506

methyl indole-3-acetate interconversion

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PWY-6303

methylsalicylate degradation

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PWY18C3-24

Microbial metabolism in diverse environments

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NAD metabolism

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NADPH to cytochrome c oxidase via plastocyanin

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PWY-8271

nicotine degradation IV

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PWY66-201

nicotine degradation V

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PWY66-221

nitrate reduction I (denitrification)

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DENITRIFICATION-PWY

nitrate reduction VII (denitrification)

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PWY-6748

nitrifier denitrification

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PWY-7084

nitrite-dependent anaerobic methane oxidation

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PWY-6523

Nitrogen metabolism

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nocardicin A biosynthesis

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PWY-7797

non-pathway related

non-pathway related

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oleandomycin activation/inactivation

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PWY-6972

Other glycan degradation

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Other types of O-glycan biosynthesis

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Oxidative phosphorylation

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oxidative phosphorylation

oxidative phosphorylation

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pentachlorophenol degradation

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PCPDEG-PWY

Pentose and glucuronate interconversions

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Pentose phosphate pathway

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pentose phosphate pathway

pentose phosphate pathway

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pentose phosphate pathway (oxidative branch) I

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OXIDATIVEPENT-PWY

phosphate acquisition

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PWY-6348

phosphatidate metabolism, as a signaling molecule

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PWY-7039

phospholipases

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LIPASYN-PWY

phospholipid remodeling (phosphatidylethanolamine, yeast)

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PWY-7409

Porphyrin and chlorophyll metabolism

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Purine metabolism

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reactive oxygen species degradation

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DETOX1-PWY-1

retinoate biosynthesis I

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PWY-6872

retinol biosynthesis

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PWY-6857

Retinol metabolism

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Riboflavin metabolism

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Sphingolipid metabolism

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Steroid biosynthesis

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Steroid degradation

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Steroid hormone biosynthesis

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sterol:steryl ester interconversion (yeast)

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PWY-7424

Styrene degradation

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succinate to chytochrome c oxidase via cytochrome c6

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PWY1YI0-2

succinate to cytochrome c oxidase via plastocyanin

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PWY1YI0-3

superoxide radicals degradation

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DETOX1-PWY

superpathway of glycolysis and the Entner-Doudoroff pathway

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GLYCOLYSIS-E-D

superpathway of methylsalicylate metabolism

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PWY18C3-25

taurine biosynthesis III

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PWY-8359

testosterone and androsterone degradation to androstendione (aerobic)

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PWY-6943

tetrapyrrole biosynthesis I (from glutamate)

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PWY-5188

tetrapyrrole biosynthesis II (from glycine)

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PWY-5189

Thiamine metabolism

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thyroid hormone biosynthesis

tRNA processing

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PWY0-1479

Tryptophan metabolism

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Tyrosine metabolism

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tyrosine metabolism

tyrosine metabolism

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urea cycle

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urea degradation II

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PWY-5704

vanillin biosynthesis I

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PWY-5665

vitamin B1 metabolism

vitamin B1 metabolism

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xyloglucan degradation II (exoglucanase)

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PWY-6807

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Lytechinus variegatus

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Lytechinus variegatus

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invaginated

Manually annotated by BRENDA team

Lytechinus variegatus

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present in all blastomeres of the early embryo

Manually annotated by BRENDA team

show

Lytechinus variegatus

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Manually annotated by BRENDA team

Lytechinus variegatus

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eight-arm F1 larvae

Manually annotated by BRENDA team

additional information

Lytechinus variegatus

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distribution, Fringe is expressed in both the signaling and the receiving cells during the first Delta-Notch signal

Manually annotated by BRENDA team

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Golgi apparatus

Lytechinus variegatus

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Manually annotated by BRENDA team

Lytechinus variegatus

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apical and surface membranes

Manually annotated by BRENDA team

Lytechinus variegatus

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Vasa associates with the spindle and the separating sister chromatids at metaphase, and then disappears after telophase

Manually annotated by BRENDA team

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

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Release 2023.1 (January 2023)