Any feedback?
Please rate this page
(organism.php)
(0/150)

BRENDA support

Information on Organism Pseudomonas cichorii

Synonyms:
ATCC 10857; "Bacterium cichorii" (Swingle 1925) Elliott 1930; Bacterium cichorii; "Bacterium formosanum" Okabe 1935; Bacterium formosanum; CCUG 32776; CFBP 2101; "Chlorobacter cichorii" (Swingle 1925) Patel and Kulkarni 1951; Chlorobacter cichorii; CIP 106704; DSM 50259; ICMP 5707; LMG 2162; LMG:2162; NCCB 69031; NCPPB 943; "Phytomonas cichorii" Swingle 1925; Phytomonas cichorii; probable synonym: "Pseudomonas papaveris" Lelliott and Wallace 1955; Pseudomonas cichorii; Pseudomonas cichorii (Swingle 1925) Stapp 1928; "Pseudomonas endiviae" Kotte 1930; Pseudomonas endiviae; Pseudomonas papaveris;
Word Map for Organism Pseudomonas cichorii
TaxTree of Organism Pseudomonas cichorii
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Gammaproteobacteria can be found in Brenda BRENDA pathways(class)
Pseudomonadales can be found in Brenda BRENDA pathways(order)
Pseudomonadaceae can be found in Brenda BRENDA pathways(family)
Pseudomonas can be found in Brenda BRENDA pathways(genus)
Pseudomonas syringae group can be found in Brenda (species group)
Pseudomonas cichorii can be found in Brenda BRENDA pathways(species)
Please wait a moment until all data is loaded. This message will disappear when all data is loaded.
top print hide
EC NUMBER
COMMENTARY hide
top print hide
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,2-dichloroethane degradation
-
-
12DICHLORETHDEG-PWY
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
acetaldehyde biosynthesis I
-
-
PWY-6333
acetylene degradation (anaerobic)
-
-
P161-PWY
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
alpha-Linolenic acid metabolism
-
-
Arginine and proline metabolism
-
-
Arginine biosynthesis
-
-
arginine metabolism
-
-
Ascorbate and aldarate metabolism
-
-
ascorbate recycling (cytosolic)
-
-
PWY-6370
Atrazine degradation
-
-
avenanthramide biosynthesis
-
-
PWY-8157
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
-
-
PWY-6444
Biosynthesis of secondary metabolites
-
-
Brassinosteroid biosynthesis
-
-
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
ceramide biosynthesis
-
-
ceramide de novo biosynthesis
-
-
PWY3DJ-12
Chloroalkane and chloroalkene degradation
-
-
Chlorocyclohexane and chlorobenzene degradation
-
-
chlorogenic acid degradation
-
-
PWY-6781
cinnamoyl-CoA biosynthesis
-
-
PWY-6457
degradation of hexoses
-
-
degradation of pentoses
-
-
degradation of sugar alcohols
-
-
divinyl ether biosynthesis II
-
-
PWY-5409
Drug metabolism - cytochrome P450
-
-
ephedrine biosynthesis
-
-
PWY-5883
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation IV
-
-
PWY66-162
ethanol fermentation
-
-
ethanolamine utilization
-
-
PWY0-1477
Fatty acid degradation
-
-
Fe(II) oxidation
-
-
PWY-6692
formate oxidation to CO2
-
-
PWY-1881
formate to nitrite electron transfer
-
-
PWY0-1585
Fructose and mannose metabolism
-
-
gamma-hexachlorocyclohexane degradation
-
-
GAMMAHEXCHLORDEG-PWY
Glycine, serine and threonine metabolism
-
-
Glycolysis / Gluconeogenesis
-
-
Glyoxylate and dicarboxylate metabolism
-
-
heterolactic fermentation
-
-
P122-PWY
jasmonic acid biosynthesis
-
-
PWY-735
L-arginine degradation V (arginine deiminase pathway)
-
-
ARGDEGRAD-PWY
L-arginine degradation XIII (reductive Stickland reaction)
-
-
PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
-
-
PWY-6344
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-methionine degradation III
-
-
PWY-5082
L-phenylalanine degradation III
-
-
PWY-5079
L-rhamnose degradation I
-
-
RHAMCAT-PWY
L-serine biosynthesis II
-
-
PWY-8011
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
-
-
PWY-5057
leucine metabolism
-
-
linoleate metabolites biosynthesis
-
-
PWY-8395
Linoleic acid metabolism
-
-
lipid A biosynthesis
-
-
lipid A-core biosynthesis (E. coli K-12)
-
-
LIPA-CORESYN-PWY
Metabolic pathways
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methionine metabolism
-
-
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
-
FERMENTATION-PWY
Naphthalene degradation
-
-
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
non-pathway related
-
-
noradrenaline and adrenaline degradation
-
-
PWY-6342
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
Oxidative phosphorylation
-
-
oxidative phosphorylation
-
-
Pentose and glucuronate interconversions
-
-
Phenylalanine metabolism
-
-
phenylalanine metabolism
-
-
phenylethanol biosynthesis
-
-
PWY-5751
Phenylpropanoid biosynthesis
-
-
phenylpropanoid biosynthesis
-
-
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
phosalacine biosynthesis
-
-
PWY-7769
phosphinothricin tripeptide biosynthesis
-
-
PWY-6322
Phosphonate and phosphinate metabolism
-
-
phytol degradation
-
-
PWY66-389
polyamine pathway
-
-
propanol degradation
-
-
Purine metabolism
-
-
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
Pyruvate metabolism
-
-
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive acetyl coenzyme A pathway
-
-
retinoate biosynthesis I
-
-
PWY-6872
Retinol metabolism
-
-
ribitol degradation I
-
-
RIBITOLUTIL-PWY
rosmarinic acid biosynthesis I
-
-
PWY-5048
salidroside biosynthesis
-
-
PWY-6802
serine metabolism
-
-
serotonin degradation
-
-
PWY-6313
serotonin metabolism
-
-
spermine and spermidine degradation I
-
-
PWY-6117
sphingolipid biosynthesis (plants)
-
-
PWY-5129
sphingolipid biosynthesis (yeast)
-
-
SPHINGOLIPID-SYN-PWY
Sphingolipid metabolism
-
-
suberin monomers biosynthesis
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
Tryptophan metabolism
-
-
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
urea cycle
-
-
urea degradation II
-
-
PWY-5704
valine metabolism
-
-
top print hide
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
top
LINKS TO OTHER DATABASES (specific for Pseudomonas cichorii)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA