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Organism related
Word Map for Organism Allium fistulosum
- Allium fistulosum
- shallot
- roylei
- leek
- chive
-
monosomic
TaxTree of Organism Allium fistulosum
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PATHWAY 
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-reticuline biosynthesis I
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PWY-3581
(Z)-butanethial-S-oxide biosynthesis
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PWY-6900
(Z)-phenylmethanethial S-oxide biosynthesis
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PWY-6539
1,5-anhydrofructose degradation
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PWY-6992
15-epi-lipoxin biosynthesis
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PWY66-393
3-hydroxy-4-methyl-anthranilate biosynthesis I
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PWY-7717
3-hydroxy-4-methyl-anthranilate biosynthesis II
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PWY-7765
4-aminobutanoate degradation V
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PWY-5022
4-hydroxy-2-nonenal detoxification
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PWY-7112
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alliin metabolism
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PWY-5706
alpha-linolenate metabolites biosynthesis
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PWY-8398
alpha-tomatine degradation
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PWY18C3-5
Amaryllidacea alkaloids biosynthesis
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PWY-7826
ammonia oxidation II (anaerobic)
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P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anandamide lipoxygenation
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PWY-8056
arachidonate metabolites biosynthesis
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PWY-8397
aromatic polyketides biosynthesis
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PWY-6316
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
aspirin triggered resolvin D biosynthesis
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PWY66-395
aspirin triggered resolvin E biosynthesis
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PWY66-394
baicalein degradation (hydrogen peroxide detoxification)
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PWY-7214
betanidin degradation
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PWY-5461
Bifidobacterium shunt
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P124-PWY
bryostatin biosynthesis
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PWY-8047
bupropion degradation
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PWY66-241
C20 prostanoid biosynthesis
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PWY66-374
C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
Calvin-Benson-Bassham cycle
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CALVIN-PWY
camalexin biosynthesis
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CAMALEXIN-SYN
cellulose degradation II (fungi)
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PWY-6788
chlorophyll a degradation I
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PWY-5098
chlorophyll a degradation II
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PWY-6927
chlorophyll a degradation III
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PWY-7164
choline biosynthesis III
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PWY-3561
coumarin biosynthesis (via 2-coumarate)
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PWY-5176
D-xylose degradation to ethylene glycol (engineered)
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PWY-7178
daphnetin modification
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PWY-7055
detoxification of reactive carbonyls in chloroplasts
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PWY-6786
di-homo-gamma-linolenate metabolites biosynthesis
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PWY-8396
diethylphosphate degradation
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PWY-5491
docosahexaenoate metabolites biosynthesis
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PWY-8400
erythritol biosynthesis I
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PWY-8372
erythritol biosynthesis II
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PWY-8373
ethanol degradation IV
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PWY66-162
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis IV (engineered)
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PWY-7126
ethiin metabolism
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PWY-5708
fatty acid biosynthesis initiation (mitochondria)
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PWY66-429
fatty acid biosynthesis initiation (plant mitochondria)
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PWY-6799
fatty acid biosynthesis initiation (type II)
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PWY-4381
Fe(II) oxidation
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PWY-6692
firefly bioluminescence
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PWY-7913
flavonoid biosynthesis
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PWY1F-FLAVSYN
flavonoid biosynthesis (in equisetum)
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PWY-6787
flavonoid di-C-glucosylation
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PWY-7897
flavonol acylglucoside biosynthesis I - kaempferol derivatives
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PWY-7168
flavonol acylglucoside biosynthesis III - quercetin derivatives
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PWY-7172
flavonol biosynthesis
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PWY-3101
formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
gliotoxin biosynthesis
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PWY-7533
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glutathione-peroxide redox reactions
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PWY-4081
glycerol degradation to butanol
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PWY-7003
glycogen degradation I
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GLYCOCAT-PWY
glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
glyoxylate cycle
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GLYOXYLATE-BYPASS
heterolactic fermentation
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P122-PWY
icosapentaenoate metabolites biosynthesis
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PWY-8399
incomplete reductive TCA cycle
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P42-PWY
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
inulin degradation
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PWY-8314
justicidin B biosynthesis
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PWY-6824
kaempferol gentiobioside biosynthesis
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PWY-7143
kaempferol glycoside biosynthesis (Arabidopsis)
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PWY-5320
kaempferol triglucoside biosynthesis
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PWY-5348
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-ascorbate degradation II (bacterial, aerobic)
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PWY-6961
L-ascorbate degradation III
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PWY-6960
L-glutamate degradation I
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GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-histidine degradation V
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PWY-5031
L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
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PWY-5651
L-tryptophan degradation X (mammalian, via tryptamine)
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PWY-6307
L-tryptophan degradation XI (mammalian, via kynurenine)
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PWY-6309
L-tyrosine degradation I
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TYRFUMCAT-PWY
leucodelphinidin biosynthesis
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PWY-5152
leucopelargonidin and leucocyanidin biosynthesis
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PWY1F-823
leukotriene biosynthesis
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PWY66-375
linamarin degradation
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PWY-3121
linustatin bioactivation
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PWY-7091
lipid A-core biosynthesis (E. coli K-12)
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LIPA-CORESYN-PWY
lipoxin biosynthesis
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PWY66-392
lotaustralin degradation
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PWY-6002
luteolin triglucuronide degradation
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PWY-7445
malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
maresin biosynthesis
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PWY-8356
matairesinol biosynthesis
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PWY-5466
melatonin degradation I
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PWY-6398
methanol oxidation to formaldehyde IV
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PWY-5506
methiin metabolism
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PWY-7614
methyl indole-3-acetate interconversion
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PWY-6303
methylaspartate cycle
methylsalicylate degradation
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PWY18C3-24
mixed acid fermentation
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FERMENTATION-PWY
mupirocin biosynthesis
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PWY-8012
mycobactin biosynthesis
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PWY185E-1
myricetin gentiobioside biosynthesis
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PWY-7140
NAD(P)/NADPH interconversion
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PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
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PWY0-1335
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
naringenin biosynthesis (engineered)
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PWY-7397
neolinustatin bioactivation
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PWY-7092
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
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PWY-6748
nitric oxide biosynthesis II (mammals)
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PWY-4983
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
o-diquinones biosynthesis
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PWY-6752
oleandomycin activation/inactivation
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PWY-6972
pederin biosynthesis
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PWY-8049
pentachlorophenol degradation
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PCPDEG-PWY
peptido-conjugates in tissue regeneration biosynthesis
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PWY-8355
phloridzin biosynthesis
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PWY-6515
phosphate acquisition
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PWY-6348
phosphatidate metabolism, as a signaling molecule
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PWY-7039
phospholipases
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LIPASYN-PWY
photosynthesis light reactions
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PWY-101
pinobanksin biosynthesis
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PWY-5059
propanethial S-oxide biosynthesis
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PWY-5707
protectin biosynthesis
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PWY-8357
protective electron sinks in the thylakoid membrane (PSII to PTOX)
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PWY1YI0-7
pyruvate fermentation to (R)-lactate
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PWY-8274
pyruvate fermentation to (S)-lactate
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PWY-5481
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to propanoate I
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P108-PWY
quercetin gentiotetraside biosynthesis
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PWY-7137
quercetin glucoside biosynthesis (Allium)
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PWY-7129
quercetin glycoside biosynthesis (Arabidopsis)
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PWY-5321
quercetin triglucoside biosynthesis
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PWY-7173
reactive oxygen species degradation
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DETOX1-PWY-1
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
resolvin D biosynthesis
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PWY66-397
retinol biosynthesis
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PWY-6857
rutin biosynthesis
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PWY-5390
sesamin biosynthesis
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PWY-5469
starch degradation I
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PWY-842
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sucrose biosynthesis II
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PWY-7238
sucrose biosynthesis III
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PWY-7347
sucrose degradation II (sucrose synthase)
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PWY-3801
sucrose degradation III (sucrose invertase)
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PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
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PWY66-373
superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
superpathway of methylsalicylate metabolism
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PWY18C3-25
syringetin biosynthesis
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PWY-5391
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VIII (Chlamydia)
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TCA-1
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
urea degradation II
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PWY-5704
vancomycin resistance I
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PWY-6454
vanillin biosynthesis I
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PWY-5665
xanthohumol biosynthesis
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PWY-5135
xanthommatin biosynthesis
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PWY-8249
methylaspartate cycle
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PWY-6728
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ORGANISM
COMMENTARY 
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Allium fistulosum)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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