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Literature summary extracted from

  • Romano, A.; Trip, H.; Lonvaud-Funel, A.; Lolkema, J.S.; Lucas, P.M.
    Evidence of two functionally distinct ornithine decarboxylation systems in lactic acid bacteria (2012), Appl. Environ. Microbiol., 78, 1953-1961.
    View publication on PubMedView publication on EuropePMC

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
4.1.1.17 0.7
-
 L-ornithine 30°C, pH 5.5 Oenococcus oeni
4.1.1.17 1
-
 L-ornithine 30°C, pH 5.5 Levilactobacillus brevis
4.1.1.17 1 2.1 L-2,4-diaminobutanoate 30°C, pH 7.5 Lactobacillus gasseri
4.1.1.17 1 1.2 L-2,4-diaminobutanoate 30°C, pH 5.5 Levilactobacillus brevis
4.1.1.17 3.9
-
 L-2,4-diaminobutanoate 30°C, pH 7.5 Lacticaseibacillus casei
4.1.1.17 4.9
-
 L-2,4-diaminobutanoate 30°C, pH 5.5 Oenococcus oeni
4.1.1.17 5
-
 L-lysine 30°C, pH 5.5 Oenococcus oeni
4.1.1.17 7.2
-
 L-ornithine 30°C, pH 7.5 Lactobacillus gasseri
4.1.1.17 7.2
-
 L-lysine 30°C, pH 5.5 Levilactobacillus brevis

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.17 Lacticaseibacillus casei Q038E5
-
-
4.1.1.17 Lacticaseibacillus casei ATCC 334 Q038E5
-
-
4.1.1.17 Lactobacillus gasseri A0A1V3Y1D0
-
-
4.1.1.17 Lactobacillus gasseri DSM 20243 A0A1V3Y1D0
-
-
4.1.1.17 Levilactobacillus brevis H8ZI01
-
-
4.1.1.17 Oenococcus oeni Q5ZH57
-
-
4.1.1.17 Oenococcus oeni IOEB 89006 Q5ZH57
-
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.17 L-2,4-diaminobutanoate
-
 Oenococcus oeni 1,3-diaminopropane + CO2
-
 ?
4.1.1.17 L-2,4-diaminobutanoate
-
 Levilactobacillus brevis 1,3-diaminopropane + CO2
-
 ?
4.1.1.17 L-2,4-diaminobutanoate
-
 Lacticaseibacillus casei 1,3-diaminopropane + CO2
-
 ?
4.1.1.17 L-2,4-diaminobutanoate
-
 Lactobacillus gasseri 1,3-diaminopropane + CO2
-
 ?
4.1.1.17 L-2,4-diaminobutanoate
-
 Lacticaseibacillus casei ATCC 334 1,3-diaminopropane + CO2
-
 ?
4.1.1.17 L-2,4-diaminobutanoate
-
 Lactobacillus gasseri DSM 20243 1,3-diaminopropane + CO2
-
 ?
4.1.1.17 L-2,4-diaminobutanoate
-
 Oenococcus oeni IOEB 89006 1,3-diaminopropane + CO2
-
 ?
4.1.1.17 L-lysine
-
 Oenococcus oeni 1,5-diaminopentane + CO2
-
 ?
4.1.1.17 L-lysine
-
 Levilactobacillus brevis 1,5-diaminopentane + CO2
-
 ?
4.1.1.17 L-lysine very low activity Lacticaseibacillus casei 1,5-diaminopentane + CO2
-
 ?
4.1.1.17 L-lysine very low activity Lactobacillus gasseri 1,5-diaminopentane + CO2
-
 ?
4.1.1.17 L-lysine very low activity Lacticaseibacillus casei ATCC 334 1,5-diaminopentane + CO2
-
 ?
4.1.1.17 L-lysine very low activity Lactobacillus gasseri DSM 20243 1,5-diaminopentane + CO2
-
 ?
4.1.1.17 L-lysine
-
 Oenococcus oeni IOEB 89006 1,5-diaminopentane + CO2
-
 ?
4.1.1.17 L-ornithine
-
 Oenococcus oeni putrescine + CO2
-
 ?
4.1.1.17 L-ornithine
-
 Levilactobacillus brevis putrescine + CO2
-
 ?
4.1.1.17 L-ornithine
-
 Lactobacillus gasseri putrescine + CO2
-
 ?
4.1.1.17 L-ornithine very low activity Lacticaseibacillus casei putrescine + CO2
-
 ?
4.1.1.17 L-ornithine very low activity Lacticaseibacillus casei ATCC 334 putrescine + CO2
-
 ?
4.1.1.17 L-ornithine
-
 Lactobacillus gasseri DSM 20243 putrescine + CO2
-
 ?
4.1.1.17 L-ornithine
-
 Oenococcus oeni IOEB 89006 putrescine + CO2
-
 ?
4.1.1.17 additional information no substrate: L-arginine Oenococcus oeni ?
-
 ?
4.1.1.17 additional information no substrate: L-arginine Levilactobacillus brevis ?
-
 ?
4.1.1.17 additional information no substrate: L-arginine Lacticaseibacillus casei ?
-
 ?
4.1.1.17 additional information no substrate: L-arginine Lactobacillus gasseri ?
-
 ?
4.1.1.17 additional information no substrate: L-arginine Lacticaseibacillus casei ATCC 334 ?
-
 ?
4.1.1.17 additional information no substrate: L-arginine Lactobacillus gasseri DSM 20243 ?
-
 ?
4.1.1.17 additional information no substrate: L-arginine Oenococcus oeni IOEB 89006 ?
-
 ?

Synonyms

EC Number Synonyms Comment Organism
4.1.1.17 ODC
-
 Levilactobacillus brevis
4.1.1.17 ODC
-
 Lacticaseibacillus casei
4.1.1.17 ODC
-
 Lactobacillus gasseri

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
4.1.1.17 0.05
-
 L-2,4-diaminobutanoate 30°C, pH 5.5 Oenococcus oeni
4.1.1.17 0.09
-
 L-lysine 30°C, pH 5.5 Oenococcus oeni
4.1.1.17 0.14
-
 L-ornithine 30°C, pH 7.5 Lactobacillus gasseri
4.1.1.17 0.35
-
 L-2,4-diaminobutanoate 30°C, pH 7.5 Lactobacillus gasseri
4.1.1.17 0.45
-
 L-2,4-diaminobutanoate 30°C, pH 5.5 Levilactobacillus brevis
4.1.1.17 0.5
-
 L-2,4-diaminobutanoate 30°C, pH 7.5 Lacticaseibacillus casei
4.1.1.17 0.57
-
 L-lysine 30°C, pH 5.5 Levilactobacillus brevis
4.1.1.17 4.8
-
 L-ornithine 30°C, pH 5.5 Levilactobacillus brevis
4.1.1.17 6.9
-
 L-ornithine 30°C, pH 5.5 Oenococcus oeni

General Information

EC Number General Information Comment Organism
4.1.1.17 physiological function ornithine decarboxylase from Lactobacillus brevis is coupled to an ornithine/putrescine transmembrane exchanger. Their combined activities results in the extracellular release of putrescine Levilactobacillus brevis
4.1.1.17 physiological function ornithine decarboxylase from Oenococcus oeni is coupled to an ornithine/putrescine transmembrane exchanger. Their combined activities results in the extracellular release of putrescine Oenococcus oeni
4.1.1.17 physiological function ornithine decarboxylase system of Lacobacillus casei is composed of a decarboxylase active on ornithine and L-2,4-diaminobutyric acid and a transporter that mediates unidirectional transport of ornithine into the cytoplasm Lacticaseibacillus casei
4.1.1.17 physiological function ornithine decarboxylase system of Lacobacillus gasseri is composed of a decarboxylase active on ornithine and L-2,4-diaminobutyric acid and a transporter that mediates unidirectional transport of ornithine into the cytoplasm Lactobacillus gasseri

kcat/KM [mM/s]

EC Number kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
4.1.1.17 0.01
-
 L-2,4-diaminobutanoate 30°C, pH 7.5 Lacticaseibacillus casei
4.1.1.17 0.01
-
 L-2,4-diaminobutanoate 30°C, pH 5.5 Oenococcus oeni
4.1.1.17 0.02
-
 L-ornithine 30°C, pH 7.5 Lactobacillus gasseri
4.1.1.17 0.02
-
 L-lysine 30°C, pH 5.5 Oenococcus oeni
4.1.1.17 0.03
-
 L-2,4-diaminobutanoate 30°C, pH 7.5 Lactobacillus gasseri
4.1.1.17 0.04
-
 L-2,4-diaminobutanoate 30°C, pH 5.5 Levilactobacillus brevis
4.1.1.17 0.08
-
 L-lysine 30°C, pH 5.5 Levilactobacillus brevis
4.1.1.17 4.7
-
 L-ornithine 30°C, pH 5.5 Levilactobacillus brevis
4.1.1.17 9.2
-
 L-ornithine 30°C, pH 5.5 Oenococcus oeni