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Literature summary for 1.13.12.19 extracted from

  • Eckert, C.; Xu, W.; Xiong, W.; Lynch, S.; Ungerer, J.; Tao, L.; Gill, R.; Maness, P.; Yu, J.
    Ethylene-forming enzyme and bioethylene production (2014), Biotechnol. Biofuels, 7, 33 .
    View publication on PubMedView publication on EuropePMC
Search for more literature for 1.13.12.19

Application

Application Comment Organism
biotechnology EFE is a promising biotechnology target because the expression of a single gene is sufficient for ethylene production in the absence of toxic intermediates Pseudomonas savastanoi pv. phaseolicola
biotechnology EFE is a promising biotechnology target because the expression of a single gene is sufficient for ethylene production in the absence of toxic intermediates Pseudomonas savastanoi pv. glycinea

Cloned(Commentary)

Cloned (Comment) Organism
gene efe, DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis and tree Penicillium digitatum
gene efe, DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis and tree Pseudomonas savastanoi pv. glycinea
gene efe, DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis and tree Ralstonia solanacearum
gene efe, DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis and tree, heterologous expression of the single efe gene from Pseudomonas syringae results in ethylene production in a number of hosts including Escherichia coli, Saccharomyces cerevisiae, Pseudomonas putida, Trichoderma viride, Trichoderma reesei, tobacco, and cyanobacteria. Methods overview Pseudomonas savastanoi pv. phaseolicola

Metals/Ions

Metals/Ions Comment Organism Structure
Fe2+ dependent on, required for catalysis Penicillium digitatum
Fe2+ dependent on, required for catalysis Pseudomonas savastanoi pv. phaseolicola
Fe2+ dependent on, required for catalysis Pseudomonas savastanoi pv. glycinea
Fe2+ dependent on, required for catalysis Ralstonia solanacearum

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
3 2-oxoglutarate + L-arginine + 3 O2 Penicillium digitatum cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
3 2-oxoglutarate + L-arginine + 3 O2 Pseudomonas savastanoi pv. phaseolicola cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
3 2-oxoglutarate + L-arginine + 3 O2 Pseudomonas savastanoi pv. glycinea cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
3 2-oxoglutarate + L-arginine + 3 O2 Ralstonia solanacearum cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
3 2-oxoglutarate + L-arginine + 3 O2 Pseudomonas savastanoi pv. phaseolicola PK2 cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?

Organism

Organism UniProt Comment Textmining
Penicillium digitatum
-
-
-
Pseudomonas savastanoi pv. glycinea Q7BS32
-
-
Pseudomonas savastanoi pv. phaseolicola P32021 i.e. Kudzu strain
-
Pseudomonas savastanoi pv. phaseolicola PK2 P32021 i.e. Kudzu strain
-
Ralstonia solanacearum Q8XPV7
-
-

Reaction

Reaction Comment Organism Reaction ID
2-oxoglutarate + O2 = ethene + 3 CO2 + H2O reaction mechanism, overview Penicillium digitatum
a
2-oxoglutarate + O2 = ethene + 3 CO2 + H2O reaction mechanism, overview Pseudomonas savastanoi pv. phaseolicola
a
2-oxoglutarate + O2 = ethene + 3 CO2 + H2O reaction mechanism, overview Pseudomonas savastanoi pv. glycinea
a
2-oxoglutarate + O2 = ethene + 3 CO2 + H2O reaction mechanism, overview Ralstonia solanacearum
a

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Penicillium digitatum 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Pseudomonas savastanoi pv. phaseolicola 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Pseudomonas savastanoi pv. glycinea 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Ralstonia solanacearum 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Pseudomonas savastanoi pv. phaseolicola PK2 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?

Synonyms

Synonyms Comment Organism
2-oxoglutarate-Fe(II) oxygenase
-
 Penicillium digitatum
2-oxoglutarate-Fe(II) oxygenase
-
 Pseudomonas savastanoi pv. phaseolicola
2-oxoglutarate-Fe(II) oxygenase
-
 Pseudomonas savastanoi pv. glycinea
2-oxoglutarate-Fe(II) oxygenase
-
 Ralstonia solanacearum
2OG-Fe(II) oxygenase
-
 Penicillium digitatum
2OG-Fe(II) oxygenase
-
 Pseudomonas savastanoi pv. phaseolicola
2OG-Fe(II) oxygenase
-
 Pseudomonas savastanoi pv. glycinea
2OG-Fe(II) oxygenase
-
 Ralstonia solanacearum
EFE
-
 Penicillium digitatum
EFE
-
 Pseudomonas savastanoi pv. phaseolicola
EFE
-
 Pseudomonas savastanoi pv. glycinea
ethylene-forming enzyme
-
 Penicillium digitatum
ethylene-forming enzyme
-
 Pseudomonas savastanoi pv. phaseolicola
ethylene-forming enzyme
-
 Pseudomonas savastanoi pv. glycinea
ethylene-forming enzyme
-
 Ralstonia solanacearum
More cf. EC 1.14.11.34 Penicillium digitatum
More cf. EC 1.14.11.34 Pseudomonas savastanoi pv. phaseolicola
More cf. EC 1.14.11.34 Pseudomonas savastanoi pv. glycinea
More cf. EC 1.14.11.34 Ralstonia solanacearum

General Information

General Information Comment Organism
metabolism analysis enzyme EFE reaction and cellular carbon flux, overview Penicillium digitatum
metabolism analysis enzyme EFE reaction and cellular carbon flux, overview Pseudomonas savastanoi pv. phaseolicola
metabolism analysis enzyme EFE reaction and cellular carbon flux, overview Pseudomonas savastanoi pv. glycinea
metabolism analysis enzyme EFE reaction and cellular carbon flux, overview Ralstonia solanacearum