Cloned (Comment) | Organism |
---|---|
gene bphC for meta-cleavage dioxygenase cloned and sequenced from genomic DNA and expressed in Escherichia coli | Sphingobium yanoikuyae |
strain CB406, meta-cleavage oxygenase BphC cloned | Pseudomonas sp. |
Inhibitors | Comment | Organism | Structure |
---|---|---|---|
3,4-dihydroxybiphenyl | strain CB406, inactivation in presence of O2 | Pseudomonas sp. | |
3-chlorocatechol | - |
Burkholderia cepacia | |
3-chlorocatechol | - |
Pseudomonas putida | |
3-methylcatechol | - |
Pseudomonas putida | |
4-Chlorocatechol | - |
Pseudomonas putida | |
4-methylcatechol | - |
Pseudomonas putida | |
alpha,alpha'-dipyridyl | inhibits catalysis, but protects the Fe2+ from oxidative inactivation | Pseudomonas sp. | |
additional information | do not cleave 3,4-dihydroxybiphenyl, but is not inactivated | Comamonas testosteroni |
Metals/Ions | Comment | Organism | Structure |
---|---|---|---|
Fe2+ | - |
Pseudomonas sp. | |
Fe2+ | - |
Pseudomonas putida | |
Fe2+ | - |
Comamonas testosteroni |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
biphenyl-2,3-diol + O2 | Pseudomonas aeruginosa | - |
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | Pseudomonas putida | - |
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | Comamonas testosteroni | - |
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | Burkholderia cepacia | - |
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | Pseudomonas oleovorans | - |
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | Sphingobium yanoikuyae | - |
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | Pseudomonas sp. | aerobic catabolism of virtually all aromatic growth substrates | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | Pseudomonas sp. CB406 | aerobic catabolism of virtually all aromatic growth substrates | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Burkholderia cepacia | - |
organism reclassified, prior refered as Pseudomonas sp. strain LB400 or Pseudomonas cepacia strain LB400 | - |
Comamonas testosteroni | - |
formerly Pseudomonas testosteroni strain B-356 | - |
Pseudomonas aeruginosa | - |
- |
- |
Pseudomonas oleovorans | - |
- |
- |
Pseudomonas putida | - |
- |
- |
Pseudomonas sp. | - |
- |
- |
Pseudomonas sp. CB406 | - |
- |
- |
Sphingobium yanoikuyae | - |
formerly Pseudomonas paucimobilis strain Q1 | - |
Oxidation Stability | Organism |
---|---|
non-heme Fe2+ enzyme which is readily inactivated, oxidizing agents including O2 and H2O2 convert the iron to Fe3+, enzyme can be reactivated by anaerobic incubation in presence of Fe2+ and reducing agents such as thiols or borohydrides | Pseudomonas sp. |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
biphenyl-2,3-diol + O2 | - |
Pseudomonas aeruginosa | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | - |
Pseudomonas sp. | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | - |
Pseudomonas putida | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | - |
Comamonas testosteroni | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | - |
Burkholderia cepacia | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | - |
Pseudomonas oleovorans | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | - |
Sphingobium yanoikuyae | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | aerobic catabolism of virtually all aromatic growth substrates | Pseudomonas sp. | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | - |
Pseudomonas sp. CB406 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
biphenyl-2,3-diol + O2 | aerobic catabolism of virtually all aromatic growth substrates | Pseudomonas sp. CB406 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O | - |
? | |
additional information | - |
Pseudomonas putida | ? | - |
? | |
additional information | - |
Sphingobium yanoikuyae | ? | - |
? | |
additional information | strain 3,4-dihydroxybiphenyl is no substrate | Comamonas testosteroni | ? | - |
? | |
additional information | strain CB406, 3,4-dihydroxybiphenyl is no substrate | Pseudomonas sp. | ? | - |
? | |
additional information | strain CB406, 3,4-dihydroxybiphenyl is no substrate | Pseudomonas sp. CB406 | ? | - |
? |
Synonyms | Comment | Organism |
---|---|---|
C23o | - |
Pseudomonas putida |