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EC Number Crystallization (Commentary)
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4-
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4chimeric protein consisting of domain I from NAD+-dependent GDH of Clostridium symbiosum, residues 1-200, domain II from NADP+-dependent GDH of Escherichia coli, residues 201-404 and the C-terminal helix again from Clostridium symbiosum, residues 405-448 which re-enters domain I. Domain II maintains its structural and functional integrity independent of the hinge and domain I. The enzyme is fully functional and retains the preference for NADP+ cofactor from the parent E. coli domain II
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4cofactor binding domain of glutamate dehydrogenase, sitting-drop vapor diffusion method. X-ray structure of the domain of wild-type enzyme and mutant enzyme R190A/E231A/K193A is solved at 1.43 A
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4complexed with NADP+ and 2-iminoglutarate. Among six subunits of hexameric GDH-binding NADP+, only four subunits bind 2-iminoglutarate in a closed form, while the other two are in an open form. In the closed form, 2-iminoglutarate is bound to the substrate-binding site with the 2-imino group stacked by the nicotinamide ring of the coenzyme, suggesting a prehydride transfer state
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4crystallized by the hanging-drop vapour-diffusion method using polyethylene glycol (PEG) 400 as the precipitant
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4dialysis against ammonium sulfate solution
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4hanging-drop method of vapour diffusion using an ammonium sulfate and PEG mixture as the precipitant. The crystals belong to the monoclinic system and are in space group C2 with unit-cell dimensions a = 142.7, b = 202.0, c = 125.8 A with beta = 113.1 degrees with a hexamer in the asymmetric unit
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4in complex with NADPH and 2-oxoglutarate. The enzyme functions as a hexamer, and each monomer comprises a Rossmann-fold cofactor-binding domain and a substrate-binding domain. In the apo-form, GDH exists as an open state, and upon binding of the substrate and cofactor the protein undergoes a conformation change to a closed state
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4plate-like crystals of monoclinic space group C2 grown by vapour-diffusion using the sitting-drop method, X-ray crystallography to a resolution of 2.7 A
Show all pathways known for 1.4.1.4Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.4purified GDH in the absence of reactants, hanging drop vapour diffusion method, mixing of 10 mg/ml protein in 20 mM Tris-HCl, pH 7.6, with 15-25% PEG 3350, Tris/HEPES, pH 70-8.0, and 0.2 M NaCl, 18°C, 2 days, X-ray diffraction structure determination and analysis at 2.5 A resolution, modelling
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