Information on Organism Xanthomonas oryzae

TaxTree of Organism Xanthomonas oryzae
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(1,4)-beta-D-xylan degradation
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(5Z)-dodecenoate biosynthesis I
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(5Z)-dodecenoate biosynthesis II
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(S)-lactate fermentation to propanoate, acetate and hydrogen
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(S)-propane-1,2-diol degradation
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1,3-propanediol biosynthesis (engineered)
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1,5-anhydrofructose degradation
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1-butanol autotrophic biosynthesis (engineered)
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3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
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3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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3-dehydroquinate biosynthesis I
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3-methylbutanol biosynthesis (engineered)
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4-hydroxy-2-nonenal detoxification
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4-hydroxybenzoate biosynthesis II (bacteria)
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8-amino-7-oxononanoate biosynthesis I
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9-lipoxygenase and 9-allene oxide synthase pathway
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acetaldehyde biosynthesis I
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acetan biosynthesis
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acetone degradation I (to methylglyoxal)
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acetone degradation III (to propane-1,2-diol)
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acetyl CoA biosynthesis
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acetyl-CoA fermentation to butanoate II
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acetylene degradation (anaerobic)
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acrylonitrile degradation I
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adenosine ribonucleotides de novo biosynthesis
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aerobic respiration (NDH-1 to cytochrome c oxidase via plastocyanin)
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aerobic respiration I (cytochrome c)
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aerobic respiration II (cytochrome c) (yeast)
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aerobic respiration III (alternative oxidase pathway)
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aerobic respiration in cyanobacteria (NDH-2 to cytochrome c oxidase via plastocyanin)
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alanine metabolism
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Alanine, aspartate and glutamate metabolism
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alpha-Linolenic acid metabolism
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Amaryllidacea alkaloids biosynthesis
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Amino sugar and nucleotide sugar metabolism
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Aminoacyl-tRNA biosynthesis
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Aminobenzoate degradation
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ammonia assimilation cycle II
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anaerobic energy metabolism (invertebrates, cytosol)
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anhydromuropeptides recycling I
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anteiso-branched-chain fatty acid biosynthesis
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arachidonate biosynthesis
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Arachidonic acid metabolism
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arachidonic acid metabolism
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Arginine and proline metabolism
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Arginine biosynthesis
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arginine metabolism
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aromatic polyketides biosynthesis
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Ascorbate and aldarate metabolism
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ascorbate glutathione cycle
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ascorbate recycling (cytosolic)
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aspartate and asparagine metabolism
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assimilatory sulfate reduction II
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assimilatory sulfate reduction III
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assimilatory sulfate reduction IV
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ATP biosynthesis
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avenanthramide biosynthesis
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bacilysin biosynthesis
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bacterial bioluminescence
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baicalein degradation (hydrogen peroxide detoxification)
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benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
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beta-Alanine metabolism
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beta-D-glucuronide and D-glucuronate degradation
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betanidin degradation
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Bifidobacterium shunt
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Biosynthesis of 12-, 14- and 16-membered macrolides
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Biosynthesis of secondary metabolites
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Biosynthesis of type II polyketide backbone
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Biotin metabolism
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bis(guanylyl tungstenpterin) cofactor biosynthesis
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bryostatin biosynthesis
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bupropion degradation
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butanoate fermentation
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Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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caffeine degradation III (bacteria, via demethylation)
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Caffeine metabolism
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Calvin-Benson-Bassham cycle
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camalexin biosynthesis
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capsiconiate biosynthesis
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Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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Carotenoid biosynthesis
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carotenoid biosynthesis
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cellulose and hemicellulose degradation (cellulolosome)
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cellulose degradation
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cellulose degradation II (fungi)
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chitin biosynthesis
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chitin degradation I (archaea)
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chitin degradation II (Vibrio)
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chitin degradation III (Serratia)
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Chloroalkane and chloroalkene degradation
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chlorophyll metabolism
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chlorosalicylate degradation
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choline biosynthesis III
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chorismate biosynthesis from 3-dehydroquinate
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chorismate metabolism
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cinnamoyl-CoA biosynthesis
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cis-vaccenate biosynthesis
Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation in Crenarchaeota
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creatine-phosphate biosynthesis
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Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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cysteine metabolism
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cytosolic NADPH production (yeast)
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D-Alanine metabolism
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D-Arginine and D-ornithine metabolism
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D-galactose degradation I (Leloir pathway)
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D-Glutamine and D-glutamate metabolism
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D-sorbitol biosynthesis I
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d-xylose degradation
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D-xylose degradation I
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degradation of aromatic, nitrogen containing compounds
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degradation of hexoses
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degradation of sugar acids
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diethylphosphate degradation
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Dioxin degradation
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dissimilatory sulfate reduction I (to hydrogen sufide))
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diterpene phytoalexins precursors biosynthesis
Diterpenoid biosynthesis
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Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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elloramycin biosynthesis
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Entner Doudoroff pathway
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Entner-Doudoroff pathway I
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Entner-Doudoroff pathway II (non-phosphorylative)
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Entner-Doudoroff pathway III (semi-phosphorylative)
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Entner-Doudoroff shunt
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ephedrine biosynthesis
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erythromycin D biosynthesis
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ethanol degradation I
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ethanol degradation II
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ethanol degradation IV
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ethanol fermentation
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ethanolamine utilization
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ethene biosynthesis I (plants)
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ethene biosynthesis III (microbes)
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ethene biosynthesis V (engineered)
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Ether lipid metabolism
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ethylmalonyl-CoA pathway
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even iso-branched-chain fatty acid biosynthesis
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farnesene biosynthesis
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Fatty acid biosynthesis
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fatty acid biosynthesis initiation (mitochondria)
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fatty acid biosynthesis initiation (plant mitochondria)
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fatty acid biosynthesis initiation (type II)
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Fatty acid degradation
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fatty acid elongation -- saturated
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Fe(II) oxidation
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Flavone and flavonol biosynthesis
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flavonoid biosynthesis
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Flavonoid biosynthesis
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flavonoid biosynthesis (in equisetum)
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flavonoid di-C-glucosylation
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Folate biosynthesis
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folate transformations II (plants)
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folate transformations III (E. coli)
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formaldehyde assimilation I (serine pathway)
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formaldehyde assimilation II (assimilatory RuMP Cycle)
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formaldehyde assimilation III (dihydroxyacetone cycle)
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formaldehyde oxidation I
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Fructose and mannose metabolism
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Galactose metabolism
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gallate biosynthesis
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gamma-glutamyl cycle
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GDP-mannose biosynthesis
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gliotoxin biosynthesis
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gluconeogenesis I
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gluconeogenesis II (Methanobacterium thermoautotrophicum)
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gluconeogenesis III
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glucose degradation (oxidative)
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glucosinolate biosynthesis from dihomomethionine
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glucosinolate biosynthesis from hexahomomethionine
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glucosinolate biosynthesis from homomethionine
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glucosinolate biosynthesis from pentahomomethionine
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glucosinolate biosynthesis from phenylalanine
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glucosinolate biosynthesis from tetrahomomethionine
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glucosinolate biosynthesis from trihomomethionine
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glucosinolate biosynthesis from tryptophan
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glucosinolate biosynthesis from tyrosine
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glutamate and glutamine metabolism
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Glutathione metabolism
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glutathione metabolism
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glutathione-mediated detoxification I
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glutathione-mediated detoxification II
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glutathione-peroxide redox reactions
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glycerol degradation to butanol
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Glycerolipid metabolism
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Glycerophospholipid metabolism
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glycine betaine biosynthesis
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glycine metabolism
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Glycine, serine and threonine metabolism
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glycogen biosynthesis III (from alpha-maltose 1-phosphate)
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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glycolysis II (from fructose 6-phosphate)
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glycolysis III (from glucose)
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glycolysis IV
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glycolysis V (Pyrococcus)
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Glycosaminoglycan degradation
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Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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gondoate biosynthesis (anaerobic)
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gossypol biosynthesis
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guanylyl molybdenum cofactor biosynthesis
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heme metabolism
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heterolactic fermentation
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homocysteine and cysteine interconversion
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hydrogen sulfide biosynthesis II (mammalian)
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hypoglycin biosynthesis
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IAA biosynthesis
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incomplete reductive TCA cycle
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indole glucosinolate activation (intact plant cell)
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indole-3-acetate biosynthesis II
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indole-3-acetate biosynthesis III (bacteria)
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indole-3-acetate biosynthesis IV (bacteria)
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Inositol phosphate metabolism
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isoprenoid biosynthesis
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Isoquinoline alkaloid biosynthesis
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jasmonic acid biosynthesis
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justicidin B biosynthesis
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L-arginine degradation X (arginine monooxygenase pathway)
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L-asparagine biosynthesis II
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L-cysteine biosynthesis III (from L-homocysteine)
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L-cysteine biosynthesis VI (from L-methionine)
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L-glutamate biosynthesis V
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L-glutamine biosynthesis III
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L-glutamine degradation II
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L-isoleucine degradation II
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L-leucine degradation III
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L-methionine biosynthesis I
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L-methionine biosynthesis II
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L-methionine degradation III
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L-methionine salvage cycle II (plants)
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L-phenylalanine biosynthesis I
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L-phenylalanine biosynthesis II
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L-phenylalanine degradation III
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L-tryptophan degradation V (side chain pathway)
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L-tyrosine biosynthesis I
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L-tyrosine biosynthesis II
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L-tyrosine biosynthesis III
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L-tyrosine degradation III
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L-valine degradation II
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lacinilene C biosynthesis
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leucine metabolism
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leukotriene biosynthesis
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Linoleic acid metabolism
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lipid A biosynthesis
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lipid A-core biosynthesis (E. coli K-12)
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lipid IVA biosynthesis (E. coli)
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lipid IVA biosynthesis (P. putida)
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lipid metabolism
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lipoate biosynthesis
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lipoate biosynthesis and incorporation I
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lipoate biosynthesis and incorporation II
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lipoate biosynthesis and incorporation III (Bacillus)
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lipoate biosynthesis and incorporation IV (yeast)
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Lipoic acid metabolism
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Lipopolysaccharide biosynthesis
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luteolin triglucuronide degradation
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Lysine degradation
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malate/L-aspartate shuttle pathway
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matairesinol biosynthesis
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melatonin degradation I
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Metabolic pathways
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metabolism of disaccharids
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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methanol oxidation to formaldehyde IV
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methionine metabolism
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methyl indole-3-acetate interconversion
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methylaspartate cycle
methylsalicylate degradation
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Microbial metabolism in diverse environments
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mixed acid fermentation
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molybdenum cofactor biosynthesis
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Monobactam biosynthesis
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mupirocin biosynthesis
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mycolate biosynthesis
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myristate biosynthesis (mitochondria)
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NAD(P)/NADPH interconversion
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NADH to cytochrome bd oxidase electron transfer I
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NADH to cytochrome bo oxidase electron transfer I
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Naphthalene degradation
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naringenin biosynthesis (engineered)
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nicotine degradation IV
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nicotine degradation V
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nitrate reduction II (assimilatory)
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nitric oxide biosynthesis II (mammals)
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Nitrogen metabolism
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nocardicin A biosynthesis
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non-pathway related
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noradrenaline and adrenaline degradation
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nucleoside and nucleotide degradation (archaea)
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o-diquinones biosynthesis
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octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
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odd iso-branched-chain fatty acid biosynthesis
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oleandomycin activation/inactivation
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oleate biosynthesis IV (anaerobic)
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One carbon pool by folate
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Other glycan degradation
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oxidative decarboxylation of pyruvate
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Oxidative phosphorylation
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oxidative phosphorylation
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p-HBAD biosynthesis
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palmitate biosynthesis
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palmitate biosynthesis (type II fatty acid synthase)
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palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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partial TCA cycle (obligate autotrophs)
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pectin degradation I
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pectin degradation II
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pederin biosynthesis
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pentachlorophenol degradation
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Pentose and glucuronate interconversions
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Pentose phosphate pathway
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pentose phosphate pathway
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pentose phosphate pathway (non-oxidative branch) II
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pentose phosphate pathway (oxidative branch) I
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Peptidoglycan biosynthesis
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peptidoglycan biosynthesis
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petroselinate biosynthesis
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phenol degradation
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phenolphthiocerol biosynthesis
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Phenylalanine metabolism
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phenylalanine metabolism
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Phenylalanine, tyrosine and tryptophan biosynthesis
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phenylethanol biosynthesis
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phenylpropanoid biosynthesis
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Phenylpropanoid biosynthesis
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phenylpropanoid biosynthesis
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phenylpropanoid biosynthesis, initial reactions
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phloridzin biosynthesis
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phosphatidate metabolism, as a signaling molecule
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phospholipases
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phosphopantothenate biosynthesis I
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photorespiration
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Photosynthesis
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photosynthesis
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photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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phytol degradation
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polybrominated dihydroxylated diphenyl ethers biosynthesis
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polybrominated phenols biosynthesis
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Polycyclic aromatic hydrocarbon degradation
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Porphyrin and chlorophyll metabolism
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propanol degradation
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propionate fermentation
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protein ubiquitination
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Purine metabolism
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purine metabolism
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pyrimidine deoxyribonucleosides salvage
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pyrimidine deoxyribonucleotides biosynthesis from CTP
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pyrimidine deoxyribonucleotides de novo biosynthesis I
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pyrimidine deoxyribonucleotides de novo biosynthesis II
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pyrimidine deoxyribonucleotides de novo biosynthesis IV
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Pyrimidine metabolism
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pyrimidine metabolism
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pyrimidine nucleobases salvage II
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pyrimidine ribonucleosides salvage III
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pyruvate decarboxylation to acetyl CoA I
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pyruvate fermentation to ethanol I
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pyruvate fermentation to ethanol II
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pyruvate fermentation to ethanol III
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pyruvate fermentation to isobutanol (engineered)
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pyruvate fermentation to propanoate I
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Pyruvate metabolism
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quinate degradation I
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quinate degradation II
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reactive oxygen species degradation
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reductive TCA cycle I
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reductive TCA cycle II
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retinol biosynthesis
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Retinol metabolism
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rosmarinic acid biosynthesis I
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Rubisco shunt
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sakuranetin biosynthesis
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salicylate degradation I
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salidroside biosynthesis
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salinosporamide A biosynthesis
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sedoheptulose bisphosphate bypass
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selenate reduction
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seleno-amino acid biosynthesis (plants)
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Selenocompound metabolism
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serotonin degradation
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sesamin biosynthesis
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Sesquiterpenoid and triterpenoid biosynthesis
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Sphingolipid metabolism
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spongiadioxin C biosynthesis
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stachyose degradation
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Starch and sucrose metabolism
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starch biosynthesis
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stearate biosynthesis II (bacteria and plants)
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Steroid hormone biosynthesis
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streptorubin B biosynthesis
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Styrene degradation
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suberin monomers biosynthesis
succinate to cytochrome bd oxidase electron transfer
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succinate to cytochrome bo oxidase electron transfer
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sucrose biosynthesis I (from photosynthesis)
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sucrose biosynthesis II
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sucrose biosynthesis III
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sucrose degradation II (sucrose synthase)
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sucrose degradation III (sucrose invertase)
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sucrose degradation IV (sucrose phosphorylase)
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sucrose degradation V (sucrose alpha-glucosidase)
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sulfate activation for sulfonation
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sulfate reduction
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sulfite oxidation II
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sulfite oxidation III
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sulfopterin metabolism
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Sulfur metabolism
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superoxide radicals degradation
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superpathway of fermentation (Chlamydomonas reinhardtii)
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superpathway of glucose and xylose degradation
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superpathway of glycolysis and the Entner-Doudoroff pathway
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superpathway of glyoxylate cycle and fatty acid degradation
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superpathway of methylsalicylate metabolism
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superpathway of photosynthetic hydrogen production
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superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
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Taurine and hypotaurine metabolism
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TCA cycle I (prokaryotic)
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TCA cycle II (plants and fungi)
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TCA cycle III (animals)
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TCA cycle IV (2-oxoglutarate decarboxylase)
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TCA cycle V (2-oxoglutarate synthase)
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TCA cycle VII (acetate-producers)
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tetrahydromethanopterin biosynthesis
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tetrapyrrole biosynthesis I (from glutamate)
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theophylline degradation
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Thiamine metabolism
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trans-zeatin biosynthesis
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trehalose biosynthesis IV
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triacylglycerol degradation
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tRNA charging
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Tryptophan metabolism
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tryptophan metabolism
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Tyrosine metabolism
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tyrosine metabolism
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ubiquinol-8 biosynthesis (late decarboxylation)
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Ubiquinone and other terpenoid-quinone biosynthesis
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ubiquinone biosynthesis
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UDP-GlcNAc biosynthesis
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UDP-N-acetyl-D-galactosamine biosynthesis II
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UDP-N-acetyl-D-galactosamine biosynthesis III
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UDP-N-acetyl-D-glucosamine biosynthesis I
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UDP-N-acetyl-D-glucosamine biosynthesis II
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UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
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UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
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UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing)
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valine metabolism
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vanillin biosynthesis I
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vitamin K-epoxide cycle
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xanthan biosynthesis
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xanthohumol biosynthesis
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Zeatin biosynthesis
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Xanthomonas oryzae)