Information on Organism Thermobifida fusca

TaxTree of Organism Thermobifida fusca
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EC NUMBER
COMMENTARY hide
preliminary BRENDA-supplied EC number
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7216
2-methylpropene degradation
-
-
PWY-7778
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
4-hydroxybenzoate biosynthesis III (plants)
-
-
PWY-6435
androstenedione degradation
-
-
PWY-6944
Benzoate degradation
-
00362
-
benzoyl-CoA degradation I (aerobic)
-
-
PWY-1361
Biosynthesis of antibiotics
-
01130
-
Biosynthesis of secondary metabolites
-
01110
-
Butanoate metabolism
-
00650
-
Caprolactam degradation
-
00930
-
Carbon fixation pathways in prokaryotes
-
00720
-
cholesterol degradation to androstenedione I (cholesterol oxidase)
-
-
PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
-
-
PWY-6946
crotonate fermentation (to acetate and cyclohexane carboxylate)
-
-
PWY-7401
fatty acid beta-oxidation I
-
-
FAO-PWY
fatty acid beta-oxidation II (peroxisome)
-
-
PWY-5136
fatty acid beta-oxidation VI (peroxisome)
-
-
PWY66-391
Fatty acid degradation
-
00071
-
Fatty acid elongation
-
00062
-
fatty acid salvage
-
-
PWY-7094
Geraniol degradation
-
00281
-
glutaryl-CoA degradation
-
-
PWY-5177
jasmonic acid biosynthesis
-
-
PWY-735
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
Lysine degradation
-
00310
-
Metabolic pathways
-
01100
-
methyl ketone biosynthesis (engineered)
-
-
PWY-7007
methyl tert-butyl ether degradation
-
-
PWY-7779
Microbial metabolism in diverse environments
-
01120
-
oleate beta-oxidation
-
-
PWY0-1337
phenylacetate degradation I (aerobic)
-
-
PWY0-321
pyruvate fermentation to butanoate
-
-
CENTFERM-PWY
pyruvate fermentation to butanol I
-
-
PWY-6583
pyruvate fermentation to butanol II (engineered)
-
-
PWY-6883
pyruvate fermentation to hexanol (engineered)
-
-
PWY-6863
Toluene degradation
-
00623
-
Tryptophan metabolism
-
00380
-
Valine, leucine and isoleucine degradation
-
00280
-
adipate degradation
adipate degradation
-
-
CO2 fixation in Crenarchaeota
CO2 fixation in Crenarchaeota
-
-
lipid metabolism
lipid metabolism
-
-
phenylacetate degradation (aerobic)
phenylacetate degradation (aerobic)
-
-
tryptophan metabolism
tryptophan metabolism
-
-
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
Carbon fixation in photosynthetic organisms
-
00710
-
Citrate cycle (TCA cycle)
-
00020
-
Cysteine and methionine metabolism
-
00270
-
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis III
-
-
PWY66-399
Glyoxylate and dicarboxylate metabolism
-
00630
-
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
incomplete reductive TCA cycle
-
-
P42-PWY
L-aspartate degradation II
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
Methane metabolism
-
00680
-
methylaspartate cycle
-
-
PWY-6728
mixed acid fermentation
-
-
FERMENTATION-PWY
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
pyruvate fermentation to propanoate I
-
-
P108-PWY
Pyruvate metabolism
-
00620
-
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
-
-
PWY-6969
aspartate and asparagine metabolism
aspartate and asparagine metabolism
-
-
C4 and CAM-carbon fixation
C4 and CAM-carbon fixation
-
-
citric acid cycle
citric acid cycle
-
-
glucose and glucose-1-phosphate degradation
-
-
GLUCOSE1PMETAB-PWY
glucose degradation (oxidative)
-
-
DHGLUCONATE-PYR-CAT-PWY
L-ascorbate biosynthesis VI (engineered pathway)
-
-
PWY-7165
Pentose phosphate pathway
-
00030
-
glycogen metabolism
glycogen metabolism
-
-
ammonia oxidation II (anaerobic)
-
-
P303-PWY
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
Nitrogen metabolism
-
00910
-
denitrification
denitrification
-
-
cysteine metabolism
cysteine metabolism
-
-
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
arsenite oxidation I (respiratory)
-
-
PWY-4521
Fe(II) oxidation
-
-
PWY-6692
Oxidative phosphorylation
-
00190
-
oxidative phosphorylation
oxidative phosphorylation
-
-
Isoquinoline alkaloid biosynthesis
-
00950
-
o-diquinones biosynthesis
-
-
PWY-6752
Tyrosine metabolism
-
00350
-
justicidin B biosynthesis
-
-
PWY-6824
matairesinol biosynthesis
-
-
PWY-5466
sesamin biosynthesis
-
-
PWY-5469
ethanol degradation IV
-
-
PWY66-162
methanol oxidation to formaldehyde IV
-
-
PWY-5506
reactive oxygen species degradation
-
-
DETOX1-PWY-1
superoxide radicals degradation
-
-
DETOX1-PWY
non-pathway related
non-pathway related
-
-
baicalein degradation (hydrogen peroxide detoxification)
-
-
PWY-7214
betanidin degradation
-
-
PWY-5461
luteolin triglucuronide degradation
-
-
PWY-7445
Phenylpropanoid biosynthesis
-
00940
-
Drug metabolism - cytochrome P450
-
00982
-
nicotine degradation IV
-
-
PWY66-201
cyclohexanol degradation
1,5-anhydrofructose degradation
-
-
PWY-6992
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
Aminobenzoate degradation
-
00627
-
Arachidonic acid metabolism
-
00590
-
bupropion degradation
-
-
PWY66-241
Caffeine metabolism
-
00232
-
Linoleic acid metabolism
-
00591
-
melatonin degradation I
-
-
PWY-6398
Metabolism of xenobiotics by cytochrome P450
-
00980
-
nicotine degradation V
-
-
PWY66-221
Retinol metabolism
-
00830
-
Steroid hormone biosynthesis
-
00140
-
vanillin biosynthesis I
-
-
PWY-5665
arachidonic acid metabolism
arachidonic acid metabolism
-
-
androgen and estrogen metabolism
androgen and estrogen metabolism
-
-
cellulose degradation
cellulose degradation
-
-
ethylene biosynthesis III (microbes)
-
-
PWY-6854
formate oxidation to CO2
-
-
PWY-1881
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
reductive acetyl coenzyme A pathway
reductive acetyl coenzyme A pathway
-
-
caffeine degradation III (bacteria, via demethylation)
-
-
PWY-6538
Drug metabolism - other enzymes
-
00983
-
Purine metabolism
-
00230
-
theophylline degradation
-
-
PWY-6999
Photosynthesis
-
00195
-
photosynthesis light reactions
-
-
PWY-101
Starch and sucrose metabolism
-
00500
-
starch degradation III
-
-
PWY-6731
starch degradation IV
-
-
PWY-6735
starch degradation
starch degradation
-
-
lipid A-core biosynthesis (E. coli K-12)
-
-
LIPA-CORESYN-PWY
lipid A biosynthesis
lipid A biosynthesis
-
-
rubber biosynthesis
-
-
PWY-5815
Terpenoid backbone biosynthesis
-
00900
-
mono-trans, poly-cis decaprenyl phosphate biosynthesis
-
-
PWY-6383
sulfate activation for sulfonation
-
-
PWY-5340
Sulfur metabolism
-
00920
-
sulfate reduction
sulfate reduction
-
-
Amino sugar and nucleotide sugar metabolism
-
00520
-
Glycolysis / Gluconeogenesis
-
00010
-
4-aminobutanoate degradation V
-
-
PWY-5022
acetyl-CoA fermentation to butanoate II
-
-
PWY-5676
gallate degradation III (anaerobic)
-
-
P3-PWY
Propanoate metabolism
-
00640
-
succinate fermentation to butanoate
-
-
PWY-5677
butanoate fermentation
butanoate fermentation
-
-
glutamate and glutamine metabolism
glutamate and glutamine metabolism
-
-
propanol degradation
propanol degradation
-
-
methyl indole-3-acetate interconversion
-
-
PWY-6303
methylsalicylate degradation
-
-
PWY18C3-24
retinol biosynthesis
-
-
PWY-6857
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
Glycerolipid metabolism
-
00561
-
triacylglycerol degradation
-
-
LIPAS-PWY
Polycyclic aromatic hydrocarbon degradation
-
00624
-
polyethylene terephthalate degradation
-
-
PWY-7794
acyl-CoA hydrolysis
-
-
PWY-5148
bacterial bioluminescence
-
-
PWY-7723
Biosynthesis of unsaturated fatty acids
-
01040
-
cutin biosynthesis
-
-
PWY-321
oleate biosynthesis II (animals and fungi)
-
-
PWY-5996
palmitate biosynthesis I (animals and fungi)
-
-
PWY-5994
sporopollenin precursors biosynthesis
-
-
PWY-6733
stearate biosynthesis I (animals and fungi)
-
-
PWY-5972
stearate biosynthesis III (fungi)
-
-
PWY3O-355
suberin monomers biosynthesis
-
-
PWY-1121
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
Ether lipid metabolism
-
00565
-
Glycerophospholipid metabolism
-
00564
-
Inositol phosphate metabolism
-
00562
-
phospholipases
-
-
LIPASYN-PWY
plasmalogen biosynthesis
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
cellulose degradation II (fungi)
-
-
PWY-6788
(1,4)-beta-D-xylan degradation
-
-
PWY-6717
cellulose and hemicellulose degradation (cellulolosome)
-
-
PWY-6784
d-xylose degradation
d-xylose degradation
-
-
chitin degradation I (archaea)
-
-
PWY-6855
chitin degradation II (Vibrio)
-
-
PWY-6902
chitin degradation III (Serratia)
-
-
PWY-7822
Other glycan degradation
-
00511
-
Sphingolipid metabolism
-
00600
-
alpha-tomatine degradation
-
-
PWY18C3-5
coumarin biosynthesis (via 2-coumarate)
-
-
PWY-5176
Cyanoamino acid metabolism
-
00460
-
firefly bioluminescence
-
-
PWY-7913
linamarin degradation
-
-
PWY-3121
linustatin bioactivation
-
-
PWY-7091
lotaustralin degradation
-
-
PWY-6002
neolinustatin bioactivation
-
-
PWY-7092
ginsenoside metabolism
ginsenoside metabolism
-
-
d-mannose degradation
d-mannose degradation
-
-
Galactose metabolism
-
00052
-
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
metabolism of disaccharids
metabolism of disaccharids
-
-
Glycosaminoglycan degradation
-
00531
-
degradation of pentoses
degradation of pentoses
-
-
starch biosynthesis
-
-
PWY-622
starch degradation II
-
-
PWY-6724
trehalose biosynthesis V
-
-
PWY-2661
beta-(1,4)-mannan degradation
-
-
PWY-7456
Fructose and mannose metabolism
-
00051
-
fructan degradation
-
-
PWY-862
amygdalin and prunasin degradation
-
-
PWY-6011
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
tea aroma glycosidic precursor bioactivation
-
-
PWY-7114
Glutathione metabolism
-
00480
-
glutathione metabolism
glutathione metabolism
-
-
Arginine biosynthesis
-
00220
-
L-arginine degradation V (arginine deiminase pathway)
-
-
ARGDEGRAD-PWY
L-proline biosynthesis II (from arginine)
-
-
PWY-4981
arginine metabolism
arginine metabolism
-
-
Alanine, aspartate and glutamate metabolism
-
00250
-
beta-Alanine metabolism
-
00410
-
GABA shunt
-
-
GLUDEG-I-PWY
L-glutamate degradation IV
-
-
PWY-4321
L-glutamate degradation IX (via 4-aminobutanoate)
-
-
PWY0-1305
Taurine and hypotaurine metabolism
-
00430
-
1-butanol autotrophic biosynthesis (engineered)
-
-
PWY-6886
Bifidobacterium shunt
-
-
P124-PWY
Entner-Doudoroff pathway I
-
-
PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
-
-
NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
-
-
PWY-2221
ethylene biosynthesis V (engineered)
-
-
PWY-7124
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
glycerol degradation to butanol
-
-
PWY-7003
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV (plant cytosol)
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
heterolactic fermentation
-
-
P122-PWY
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7218
Rubisco shunt
-
-
PWY-5723
superpathway of glucose and xylose degradation
-
-
PWY-6901
glycolysis
glycolysis
-
-
2-carboxy-1,4-naphthoquinol biosynthesis
-
-
PWY-5837
Ubiquinone and other terpenoid-quinone biosynthesis
-
00130
-
vitamin K metabolism
vitamin K metabolism
-
-
Pentose and glucuronate interconversions
-
00040
-
D-xylose degradation I
-
-
XYLCAT-PWY
3-hydroxypropanoate cycle
-
-
PWY-5743
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
conversion of succinate to propanoate
-
-
PWY0-43
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
-
-
PWY-7854
propanoyl CoA degradation I
-
-
PROPIONMET-PWY
propionate fermentation
propionate fermentation
-
-
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
PWY-7900
trehalose biosynthesis IV
-
-
PWY-2622
itaconate degradation
-
-
PWY-5749
protein Pupylation and dePupylation
-
-
PWY-7893
Pantothenate and CoA biosynthesis
-
00770
-
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
pantothenate biosynthesis
pantothenate biosynthesis
-
-
Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
PWY-6146
anapleurotic synthesis of oxalacetate
anapleurotic synthesis of oxalacetate
-
-
tRNA splicing II
-
-
PWY-7803
oleandomycin activation/inactivation
-
-
PWY-6972
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
additional information
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Thermobifida fusca)