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Information on Organism Shigella flexneri

TaxTree of Organism Shigella flexneri
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(5Z)-dodecenoate biosynthesis I
-
-
PWY0-862
(5Z)-dodecenoate biosynthesis II
-
-
PWY-7858
(aminomethyl)phosphonate degradation
-
-
PWY-7805
(Kdo)2-lipid A modification (H. pylori)
-
-
PWY2DNV-3
(R)-cysteate degradation
-
-
PWY-6642
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-reticuline biosynthesis
-
-
(S)-reticuline biosynthesis I
-
-
PWY-3581
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
2,3-dihydroxybenzoate biosynthesis
-
-
PWY-5901
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-carboxy-1,4-naphthoquinol biosynthesis
-
-
PWY-5837
2-deoxy-D-glucose 6-phosphate degradation
-
-
PWY-8121
2-oxoglutarate decarboxylation to succinyl-CoA
-
-
PWY-5084
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
-
-
PWY-5531
3-(4-hydroxyphenyl)pyruvate biosynthesis
-
-
PWY-5886
3-dehydroquinate biosynthesis II (archaea)
-
-
PWY-6160
3-phosphoinositide biosynthesis
-
-
PWY-6352
3-phosphoinositide degradation
-
-
PWY-6368
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxybenzoate biosynthesis I (eukaryotes)
-
-
PWY-5754
5,6-dimethylbenzimidazole biosynthesis I (aerobic)
-
-
PWY-5523
8-amino-7-oxononanoate biosynthesis I
-
-
PWY-6519
8-amino-7-oxononanoate biosynthesis IV
-
-
PWY-8203
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage III
-
-
PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
adenosine ribonucleotides de novo biosynthesis
-
-
PWY-7219
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
ajmaline and sarpagine biosynthesis
-
-
PWY-5301
alanine metabolism
-
-
alanine racemization
-
-
PWY-8072
Alanine, aspartate and glutamate metabolism
-
-
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
alpha-Linolenic acid metabolism
-
-
Amino sugar and nucleotide sugar metabolism
-
-
Aminoacyl-tRNA biosynthesis
-
-
aminopropylcadaverine biosynthesis
-
-
PWY0-1303
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
ammonia oxidation II (anaerobic)
-
-
P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anandamide biosynthesis I
-
-
PWY-8051
anandamide biosynthesis II
-
-
PWY-8053
anandamide lipoxygenation
-
-
PWY-8056
ansatrienin biosynthesis
-
-
PWY-8040
anteiso-branched-chain fatty acid biosynthesis
-
-
PWY-8173
apratoxin A biosynthesis
-
-
PWY-8361
arachidonate biosynthesis
-
-
arachidonate metabolites biosynthesis
-
-
PWY-8397
Arachidonic acid metabolism
-
-
arachidonic acid metabolism
-
-
Arginine and proline metabolism
-
-
Arginine biosynthesis
-
-
arginine dependent acid resistance
-
-
PWY0-1299
arginine metabolism
-
-
arsenate detoxification I
-
-
PWY-8264
arsenate reduction (respiratory)
-
-
PWY-4601
arsenic detoxification (mammals)
-
-
PWY-4202
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
arsonoacetate degradation
-
-
P482-PWY
Ascorbate and aldarate metabolism
-
-
ascorbate metabolism
-
-
ascorbate recycling (cytosolic)
-
-
PWY-6370
aspartate and asparagine metabolism
-
-
aspirin triggered resolvin D biosynthesis
-
-
PWY66-395
aspirin triggered resolvin E biosynthesis
-
-
PWY66-394
ATP biosynthesis
-
-
PWY-7980
Atrazine degradation
-
-
atromentin biosynthesis
-
-
PWY-7518
autoinducer AI-2 biosynthesis I
-
-
PWY-6153
autoinducer AI-2 biosynthesis II (Vibrio)
-
-
PWY-6154
bacterial bioluminescence
-
-
PWY-7723
baicalein degradation (hydrogen peroxide detoxification)
-
-
PWY-7214
beta-Alanine metabolism
-
-
beta-D-glucuronide and D-glucuronate degradation
-
-
PWY-7247
betanidin degradation
-
-
PWY-5461
Bifidobacterium shunt
-
-
P124-PWY
bile acid biosynthesis, neutral pathway
-
-
bile acids deconjugation
-
-
PWY-8135
Biosynthesis of secondary metabolites
-
-
Biosynthesis of siderophore group nonribosomal peptides
-
-
Biosynthesis of unsaturated fatty acids
-
-
Biosynthesis of various secondary metabolites - part 3
-
-
Biotin metabolism
-
-
bisucaberin biosynthesis
-
-
PWY-6381
Butanoate metabolism
-
-
C20 prostanoid biosynthesis
-
-
PWY66-374
C4 and CAM-carbon fixation
-
-
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
cadaverine biosynthesis
-
-
PWY0-1601
Caffeine metabolism
-
-
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
camalexin biosynthesis
-
-
CAMALEXIN-SYN
Carbon fixation in photosynthetic organisms
-
-
Carbon fixation pathways in prokaryotes
-
-
cardiolipin biosynthesis
-
-
cellulose degradation
-
-
cellulose degradation II (fungi)
-
-
PWY-6788
chitin degradation I (archaea)
-
-
PWY-6855
chitin degradation II (Vibrio)
-
-
PWY-6902
chitin degradation III (Serratia)
-
-
PWY-7822
Chloroalkane and chloroalkene degradation
-
-
chorismate biosynthesis from 3-dehydroquinate
-
-
PWY-6163
chorismate metabolism
-
-
cichoriin interconversion
-
-
PWY-7057
cis-vaccenate biosynthesis
Citrate cycle (TCA cycle)
-
-
citric acid cycle
-
-
coenzyme B biosynthesis
-
-
P241-PWY
coenzyme M biosynthesis
-
-
coenzyme M biosynthesis II
-
-
PWY-6643
cremeomycin biosynthesis
-
-
PWY-8296
cutin biosynthesis
-
-
PWY-321
Cyanoamino acid metabolism
-
-
Cysteine and methionine metabolism
-
-
cysteine metabolism
-
-
cytochrome c biogenesis (system I type)
-
-
PWY-8147
D-Amino acid metabolism
-
-
D-arabinose degradation II
-
-
DARABCATK12-PWY
D-cycloserine biosynthesis
-
-
PWY-7274
D-galactose detoxification
-
-
PWY-3821
D-lactate to cytochrome bo oxidase electron transfer
-
-
PWY0-1565
D-myo-inositol (1,4,5)-trisphosphate degradation
-
-
PWY-6363
D-myo-inositol-5-phosphate metabolism
-
-
PWY-6367
daphnin interconversion
-
-
PWY-7056
degradation of hexoses
-
-
degradation of pentoses
-
-
degradation of sugar acids
-
-
degradation of sugar alcohols
-
-
denitrification
-
-
desferrioxamine B biosynthesis
-
-
PWY-6376
desferrioxamine E biosynthesis
-
-
PWY-6375
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
diethylphosphate degradation
-
-
PWY-5491
dimethyl sulfide biosynthesis from methionine
-
-
PWY-7793
dipicolinate biosynthesis
-
-
PWY-8088
docosahexaenoate metabolites biosynthesis
-
-
PWY-8400
Drug metabolism - cytochrome P450
-
-
Drug metabolism - other enzymes
-
-
dTDP-beta-L-rhamnose biosynthesis
-
-
DTDPRHAMSYN-PWY
dTDPLrhamnose biosynthesis
-
-
dTMP de novo biosynthesis (mitochondrial)
-
-
PWY66-385
ectoine biosynthesis
-
-
P101-PWY
enterobactin biosynthesis
-
-
Escherichia coli serotype O:9 O antigen biosynthesis
-
-
PWY-8250
Escherichia coli serotype O:9a O antigen biosynthesis
-
-
PWY-7905
ethanol degradation IV
-
-
PWY66-162
ethanol fermentation
-
-
ethene biosynthesis III (microbes)
-
-
PWY-6854
Ether lipid metabolism
-
-
even iso-branched-chain fatty acid biosynthesis
-
-
PWY-8175
Fatty acid biosynthesis
-
-
Fatty acid elongation
-
-
fatty acid elongation -- saturated
-
-
FASYN-ELONG-PWY
Fe(II) oxidation
-
-
PWY-6692
FeMo cofactor biosynthesis
-
-
PWY-7710
flavin biosynthesis
-
-
Flavone and flavonol biosynthesis
-
-
fluoroacetate and fluorothreonine biosynthesis
-
-
PWY-6644
Folate biosynthesis
-
-
folate transformations I
-
-
PWY-2201
folate transformations II (plants)
-
-
PWY-3841
folate transformations III (E. coli)
-
-
1CMET2-PWY
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
formaldehyde oxidation
-
-
formaldehyde oxidation II (glutathione-dependent)
-
-
PWY-1801
formate oxidation to CO2
-
-
PWY-1881
fructan degradation
-
-
PWY-862
Fructose and mannose metabolism
-
-
GABA shunt I
-
-
GLUDEG-I-PWY
GABA shunt II
-
-
PWY-8346
Galactose metabolism
-
-
gamma-glutamyl cycle
-
-
PWY-4041
GDP-alpha-D-glucose biosynthesis
-
-
PWY-5661
gliotoxin biosynthesis
-
-
PWY-7533
gluconeogenesis
-
-
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucose and glucose-1-phosphate degradation
-
-
GLUCOSE1PMETAB-PWY
glutamate and glutamine metabolism
-
-
Glutathione metabolism
-
-
glutathione metabolism
-
-
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glycerol degradation I
-
-
PWY-4261
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
-
-
PWY0-1561
Glycerolipid metabolism
-
-
Glycerophospholipid metabolism
-
-
Glycine, serine and threonine metabolism
-
-
glycogen degradation I
-
-
GLYCOCAT-PWY
glycogen degradation II
-
-
PWY-5941
glycogen metabolism
-
-
glycolysis
-
-
Glycolysis / Gluconeogenesis
-
-
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
Glycosaminoglycan degradation
-
-
Glycosphingolipid biosynthesis - ganglio series
-
-
Glycosphingolipid biosynthesis - globo and isoglobo series
-
-
Glyoxylate and dicarboxylate metabolism
-
-
glyphosate degradation III
-
-
PWY-7807
gondoate biosynthesis (anaerobic)
-
-
PWY-7663
grixazone biosynthesis
-
-
PWY-7153
guanine and guanosine salvage I
-
-
PWY-6620
guanosine nucleotides degradation III
-
-
PWY-6608
heme b biosynthesis II (oxygen-independent)
-
-
HEMESYN2-PWY
heme metabolism
-
-
heterolactic fermentation
-
-
P122-PWY
histamine biosynthesis
-
-
PWY-6173
Histidine metabolism
-
-
histidine metabolism
-
-
hyaluronan degradation
-
-
PWY-7645
hypoglycin biosynthesis
-
-
PWY-5826
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
Indole alkaloid biosynthesis
-
-
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis VI (bacteria)
-
-
TRPIAACAT-PWY
inosine 5'-phosphate degradation
-
-
PWY-5695
Inositol phosphate metabolism
-
-
Isoquinoline alkaloid biosynthesis
-
-
justicidin B biosynthesis
-
-
PWY-6824
L-alanine biosynthesis II
-
-
ALANINE-SYN2-PWY
L-alanine degradation I
-
-
ALADEG-PWY
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation III
-
-
ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
-
-
PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-arabinose degradation I
-
-
ARABCAT-PWY
L-arginine degradation III (arginine decarboxylase/agmatinase pathway)
-
-
PWY0-823
L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)
-
-
ARGDEG-III-PWY
L-arginine degradation V (arginine deiminase pathway)
-
-
ARGDEGRAD-PWY
L-arginine degradation XIII (reductive Stickland reaction)
-
-
PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
-
-
PWY-6344
L-ascorbate degradation I (bacterial, anaerobic)
-
-
PWY0-301
L-asparagine biosynthesis I
-
-
ASPARAGINE-BIOSYNTHESIS
L-asparagine degradation III (mammalian)
-
-
ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
-
-
ASPARTATESYN-PWY
L-aspartate degradation I
-
-
ASPARTATE-DEG1-PWY
L-aspartate degradation II (aerobic)
-
-
PWY-8291
L-aspartate degradation III (anaerobic)
-
-
PWY-8294
L-cysteine biosynthesis I
-
-
CYSTSYN-PWY
L-cysteine biosynthesis VI (reverse transsulfuration)
-
-
PWY-I9
L-cysteine biosynthesis VII (from S-sulfo-L-cysteine)
-
-
PWY-7870
L-fucose degradation I
-
-
FUCCAT-PWY
L-glutamate biosynthesis III
-
-
GLUTSYNIII-PWY
L-glutamate degradation II
-
-
GLUTDEG-PWY
L-glutamate degradation IX (via 4-aminobutanoate)
-
-
PWY0-1305
L-glutamine biosynthesis I
-
-
GLNSYN-PWY
L-glutamine degradation II
-
-
GLUTAMINEFUM-PWY
L-histidine degradation V
-
-
PWY-5031
L-homoserine biosynthesis
-
-
HOMOSERSYN-PWY
L-lactaldehyde degradation
-
-
L-lysine biosynthesis I
-
-
DAPLYSINESYN-PWY
L-lysine biosynthesis II
-
-
PWY-2941
L-lysine biosynthesis III
-
-
PWY-2942
L-lysine biosynthesis IV
-
-
LYSINE-AMINOAD-PWY
L-lysine biosynthesis V
-
-
PWY-3081
L-lysine biosynthesis VI
-
-
PWY-5097
L-lysine degradation I
-
-
PWY0-461
L-lysine degradation X
-
-
PWY-6328
L-methionine biosynthesis IV
-
-
PWY-7977
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine degradation II (anaerobic)
-
-
ANAPHENOXI-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
-
-
PWY-8014
L-serine biosynthesis I
-
-
SERSYN-PWY
L-tryptophan degradation IV (via indole-3-lactate)
-
-
TRPKYNCAT-PWY
L-tryptophan degradation VIII (to tryptophol)
-
-
PWY-5081
L-tryptophan degradation XIII (reductive Stickland reaction)
-
-
PWY-8017
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine degradation I
-
-
TYRFUMCAT-PWY
L-tyrosine degradation II
-
-
PWY-5151
L-tyrosine degradation III
-
-
PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
-
-
PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
-
-
PWY-8016
lactate fermentation
-
-
leukotriene biosynthesis
-
-
PWY66-375
linoleate metabolites biosynthesis
-
-
PWY-8395
Linoleic acid metabolism
-
-
lipid A biosynthesis
-
-
lipid A-core biosynthesis (E. coli K-12)
-
-
LIPA-CORESYN-PWY
lipid metabolism
-
-
Lipopolysaccharide biosynthesis
-
-
lipoxin biosynthesis
-
-
PWY66-392
lupanine biosynthesis
-
-
PWY-5468
luteolin triglucuronide degradation
-
-
PWY-7445
Lysine biosynthesis
-
-
Lysine degradation
-
-
lysine metabolism
-
-
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
maresin biosynthesis
-
-
PWY-8356
matairesinol biosynthesis
-
-
PWY-5466
melibiose degradation
-
-
PWY0-1301
Metabolic pathways
-
-
metabolism of disaccharids
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methionine metabolism
-
-
methyl indole-3-acetate interconversion
-
-
PWY-6303
methylaspartate cycle
-
-
methylsalicylate degradation
-
-
PWY18C3-24
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
-
FERMENTATION-PWY
Monobactam biosynthesis
-
-
mRNA capping I
-
-
PWY-7375
mycolate biosynthesis
-
-
PWYG-321
myo-inositol biosynthesis
N-3-oxalyl-L-2,3-diaminopropanoate biosynthesis
-
-
PWY-8071
N-Glycan biosynthesis
-
-
NAD de novo biosynthesis I
-
-
PYRIDNUCSYN-PWY
NAD de novo biosynthesis III
-
-
PWY-8352
NAD de novo biosynthesis IV (anaerobic)
-
-
PWY-8277
NAD metabolism
-
-
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
-
-
PWY0-1567
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
Neomycin, kanamycin and gentamicin biosynthesis
-
-
Nicotinate and nicotinamide metabolism
-
-
nicotine biosynthesis
-
-
PWY-5316
nitrate assimilation
-
-
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitrogen fixation I (ferredoxin)
-
-
N2FIX-PWY
Nitrogen metabolism
-
-
Nitrotoluene degradation
-
-
nocardicin A biosynthesis
-
-
PWY-7797
non-pathway related
-
-
norspermidine biosynthesis
-
-
PWY-6562
Novobiocin biosynthesis
-
-
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
O-Antigen nucleotide sugar biosynthesis
-
-
o-diquinones biosynthesis
-
-
PWY-6752
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
-
-
PWY-7388
odd iso-branched-chain fatty acid biosynthesis
-
-
PWY-8174
oleate biosynthesis II (animals and fungi)
-
-
PWY-5996
oleate biosynthesis IV (anaerobic)
-
-
PWY-7664
One carbon pool by folate
-
-
Other glycan degradation
-
-
Other types of O-glycan biosynthesis
-
-
oxalate degradation II
-
-
PWY-6695
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
Oxidative phosphorylation
-
-
oxidative phosphorylation
-
-
palmitate biosynthesis
-
-
palmitate biosynthesis II (type II fatty acid synthase)
-
-
PWY-5971
palmitate biosynthesis III
-
-
PWY-8279
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
-
-
PWY-6282
Pantothenate and CoA biosynthesis
-
-
pantothenate biosynthesis
-
-
pectin degradation II
-
-
PWY-7248
Penicillin and cephalosporin biosynthesis
-
-
pentachlorophenol degradation
-
-
PCPDEG-PWY
Pentose and glucuronate interconversions
-
-
Pentose phosphate pathway
-
-
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
peptido-conjugates in tissue regeneration biosynthesis
-
-
PWY-8355
Peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis I (meso-diaminopimelate containing)
-
-
PEPTIDOGLYCANSYN-PWY
peptidoglycan biosynthesis II (staphylococci)
-
-
PWY-5265
peptidoglycan biosynthesis III (mycobacteria)
-
-
PWY-6385
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
PWY-6471
peptidoglycan biosynthesis V (beta-lactam resistance)
-
-
PWY-6470
peptidoglycan maturation (meso-diaminopimelate containing)
-
-
PWY0-1586
periplasmic disulfide bond formation
-
-
PWY0-1599
petroselinate biosynthesis
-
-
PWY-5367
phenol degradation
-
-
Phenylalanine metabolism
-
-
Phenylalanine, tyrosine and tryptophan biosynthesis
-
-
phenylmercury acetate degradation
Phenylpropanoid biosynthesis
-
-
phosphate acquisition
-
-
PWY-6348
phosphatidylcholine acyl editing
-
-
PWY-6803
phospholipases
-
-
LIPASYN-PWY
phospholipid remodeling (phosphatidate, yeast)
-
-
PWY-7417
phospholipid remodeling (phosphatidylcholine, yeast)
-
-
PWY-7416
phospholipid remodeling (phosphatidylethanolamine, yeast)
-
-
PWY-7409
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
photorespiration I
-
-
PWY-181
photorespiration II
-
-
PWY-8362
photorespiration III
-
-
PWY-8363
Photosynthesis
-
-
photosynthesis
-
-
phytate degradation I
-
-
PWY-4702
phytochromobilin biosynthesis
-
-
PWY-7170
plasmalogen biosynthesis I (aerobic)
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
platensimycin biosynthesis
-
-
PWY-8179
polyamine pathway
-
-
Polyketide sugar unit biosynthesis
-
-
polyphosphate metabolism
-
-
PWY-8138
Porphyrin and chlorophyll metabolism
-
-
Primary bile acid biosynthesis
-
-
proline to cytochrome bo oxidase electron transfer
-
-
PWY0-1544
Propanoate metabolism
-
-
protectin biosynthesis
-
-
PWY-8357
protein N-glycosylation initial phase (eukaryotic)
-
-
MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
protein S-nitrosylation and denitrosylation
-
-
PWY-7798
protein ubiquitination
-
-
PWY-7511
purine deoxyribonucleosides degradation I
-
-
PWY-7179
purine deoxyribonucleosides degradation II
-
-
PWY-7179-1
Purine metabolism
-
-
purine metabolism
-
-
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
purine ribonucleosides degradation
-
-
PWY0-1296
putrescine biosynthesis I
-
-
PWY-40
putrescine biosynthesis II
-
-
PWY-43
pyrimidine deoxyribonucleosides degradation
-
-
PWY-7181
pyrimidine deoxyribonucleosides salvage
-
-
PWY-7199
pyrimidine deoxyribonucleotides biosynthesis from CTP
-
-
PWY-7210
pyrimidine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7184
pyrimidine deoxyribonucleotides de novo biosynthesis II
-
-
PWY-7187
pyrimidine deoxyribonucleotides de novo biosynthesis IV
-
-
PWY-7198
Pyrimidine metabolism
-
-
pyrimidine metabolism
-
-
pyrimidine ribonucleosides degradation
-
-
PWY0-1295
pyrimidine ribonucleosides salvage I
-
-
PWY-7193
pyrimidine ribonucleosides salvage II
-
-
PWY-6556
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to acetate IV
-
-
PWY-5485
pyruvate fermentation to ethanol I
-
-
PWY-5480
Pyruvate metabolism
-
-
pyruvate to cytochrome bo oxidase electron transfer
-
-
PWY-7544
queuosine biosynthesis I (de novo)
-
-
PWY-6700
queuosine biosynthesis II (queuine salvage)
-
-
PWY-8105
queuosine biosynthesis III (queuosine salvage)
-
-
PWY-8106
quinate degradation II
-
-
PWY-6416
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive acetyl coenzyme A pathway
-
-
reductive monocarboxylic acid cycle
-
-
PWY-5493
resolvin D biosynthesis
-
-
PWY66-397
retinol biosynthesis
-
-
PWY-6857
Riboflavin metabolism
-
-
rosmarinic acid biosynthesis I
-
-
PWY-5048
S-adenosyl-L-methionine salvage I
-
-
PWY-6151
salicylate biosynthesis I
-
-
PWY-6406
salicylate biosynthesis II
-
-
PWY-8321
salinosporamide A biosynthesis
-
-
PWY-6627
Secondary bile acid biosynthesis
-
-
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
seleno-amino acid biosynthesis (plants)
-
-
PWY-6936
seleno-amino acid detoxification and volatilization I
-
-
PWY-6931
seleno-amino acid detoxification and volatilization III
-
-
PWY-6933
Selenocompound metabolism
-
-
serine metabolism
-
-
sesamin biosynthesis
-
-
PWY-5469
spermidine biosynthesis II
-
-
PWY-6559
spermidine biosynthesis III
-
-
PWY-6834
sphingolipid biosynthesis (mammals)
-
-
PWY-7277
Sphingolipid metabolism
-
-
sphingomyelin metabolism
-
-
PWY3DJ-11281
sporopollenin precursors biosynthesis
-
-
PWY-6733
stachyose degradation
-
-
PWY-6527
Starch and sucrose metabolism
-
-
starch degradation
-
-
starch degradation III
-
-
PWY-6731
starch degradation IV
-
-
PWY-6735
stearate biosynthesis I (animals)
-
-
PWY-5972
stearate biosynthesis II (bacteria and plants)
-
-
PWY-5989
stearate biosynthesis III (fungi)
-
-
PWY3O-355
stearate biosynthesis IV
-
-
PWY-8280
Steroid biosynthesis
-
-
Steroid hormone biosynthesis
-
-
sterol:steryl ester interconversion (yeast)
-
-
PWY-7424
streptomycin biosynthesis
-
-
PWY-5940
Streptomycin biosynthesis
-
-
streptorubin B biosynthesis
-
-
PWY1A0-6120
suberin monomers biosynthesis
-
-
PWY-1121
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sulfide oxidation IV (mitochondria)
-
-
PWY-7927
sulfolactate degradation III
-
-
PWY-6638
sulfopterin metabolism
-
-
Sulfur metabolism
-
-
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of nicotine biosynthesis
-
-
PWY-7342
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
-
-
PWY0-166
Taurine and hypotaurine metabolism
-
-
TCA cycle VIII (Chlamydia)
-
-
TCA-1
teichuronic acid biosynthesis (B. subtilis 168)
-
-
PWY-7820
tetradecanoate biosynthesis (mitochondria)
-
-
PWY66-430
tetrahydrofolate biosynthesis I
-
-
PWY-6614
tetrahydrofolate biosynthesis II
-
-
PWY2DNV-11
tetrahydrofolate metabolism
-
-
tetrapyrrole biosynthesis I (from glutamate)
-
-
PWY-5188
Thiamine metabolism
-
-
thiosulfate disproportionation IV (rhodanese)
-
-
PWY-5350
threonine metabolism
-
-
thyroid hormone biosynthesis
trehalose biosynthesis I
-
-
TRESYN-PWY
trehalose degradation I (low osmolarity)
-
-
TREDEGLOW-PWY
trehalose degradation II (cytosolic)
-
-
PWY0-1182
trehalose degradation IV
-
-
PWY-2722
trehalose degradation V
-
-
PWY-2723
triacylglycerol degradation
-
-
LIPAS-PWY
tRNA charging
-
-
TRNA-CHARGING-PWY
tRNA processing
-
-
PWY0-1479
Tropane, piperidine and pyridine alkaloid biosynthesis
-
-
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
Ubiquinone and other terpenoid-quinone biosynthesis
-
-
UDP-alpha-D-glucuronate biosynthesis (from UDP-glucose)
-
-
PWY-7346
UDP-N-acetyl-D-galactosamine biosynthesis I
-
-
PWY-5512
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
urea cycle
-
-
urea degradation II
-
-
PWY-5704
UTP and CTP dephosphorylation II
-
-
PWY-7177
vancomycin resistance I
-
-
PWY-6454
Various types of N-glycan biosynthesis
-
-
vitamin B1 metabolism
-
-
vitamin B12 metabolism
-
-
vitamin K metabolism
-
-
vitamin K-epoxide cycle
xanthine and xanthosine salvage
-
-
SALVPURINE2-PWY
xanthommatin biosynthesis
-
-
PWY-8249
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
oxalate enrichment culture
Manually annotated by BRENDA team
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Shigella flexneri)