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Organism related
Word Map for Organism Ricinus communis
- Ricinus communis
- lectin
- peanut
- hale
- lens
-
pna
- biflorus
- dolichos
-
sialic
- culinaris
- n-glycosidase
- a-chains
- simplicifolia
- ensiformis
- amurensis
- neuraminidase
- hypogaea
-
glyoxysomes
- pomatia
- tetragonolobus
- precatorius
-
ricinoleic
- curcas
-
histochemistry
- arachis
-
agglutinin-i
-
lectin-binding
- griffonia
- polyphemus
-
desialylated
-
bandeiraea
- europeus
- n-acetyllactosamine
-
biantennary
-
galactose-specific
- abrus
- willebrand
-
proplastids
-
wheat-germ
-
complex-type
-
limax
- maackia
- glycopolymer
- galnac
- n-acetyl-d-galactosamine
-
galactosylation
- canavalia
- pomifera
-
fluorescein-conjugated
-
galactose-binding
- maclura
TaxTree of Organism Ricinus communis
Condensed Tree View
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EC NUMBER 
COMMENTARY 
-
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(3R)-linalool biosynthesis
-
-
PWY-7709
(3R)-N-[(2S)-1-hydroxy-6-[(3R)-3-isocyanobutanamido]hexan-2-yl]-3-isocyanobutanamide biosynthesis
-
-
PWY-8320
(3S)-linalool biosynthesis
-
-
PWY-7141
(4R)-carvone biosynthesis
-
-
PWY-5928
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
-
-
PWY-7726
(5Z)-dodecenoate biosynthesis I
-
-
PWY0-862
(5Z)-dodecenoate biosynthesis II
-
-
PWY-7858
(9Z)-tricosene biosynthesis
-
-
PWY-7035
(aminomethyl)phosphonate degradation
-
-
PWY-7805
(R)-cysteate degradation
-
-
PWY-6642
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
(S)-reticuline biosynthesis I
-
-
PWY-3581
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,5-anhydrofructose degradation
-
-
PWY-6992
1-butanol autotrophic biosynthesis (engineered)
-
-
PWY-6886
10-cis-heptadecenoyl-CoA degradation (yeast)
-
-
PWY-7337
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
-
-
PWY-7338
11-oxyandrogens biosynthesis
-
-
PWY-8202
1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3)
-
-
PWY-6361
1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)
-
-
PWY-6362
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
-
-
PWY-4661
1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)
-
-
PWY-6372
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3)
-
-
PWY-6554
2'-deoxymugineic acid phytosiderophore biosynthesis
-
-
PWY-5912
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-methyl-branched fatty acid beta-oxidation
-
-
PWY-8181
2-methylcitrate cycle I
-
-
PWY0-42
2-methylcitrate cycle II
-
-
PWY-5747
2-methylisoborneol biosynthesis
-
-
PWY-7087
2-methylpropene degradation
-
-
PWY-7778
2-nitrotoluene degradation
-
-
PWY-5641
24-epi-campesterol, fucosterol, and clionasterol biosynthesis (diatoms)
-
-
PWY-8238
3-(4-hydroxyphenyl)pyruvate biosynthesis
-
-
PWY-5886
3-hydroxypropanoate cycle
-
-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-methyl-branched fatty acid alpha-oxidation
-
-
PWY66-387
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
3-phosphoinositide biosynthesis
-
-
PWY-6352
4-aminobutanoate degradation V
-
-
PWY-5022
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxybenzoate biosynthesis I (eukaryotes)
-
-
PWY-5754
4-oxopentanoate degradation
-
-
PWY-7948
6-gingerol analog biosynthesis (engineered)
-
-
PWY-6920
8-amino-7-oxononanoate biosynthesis I
-
-
PWY-6519
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
-
-
PWY-7340
ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide
-
-
PWY-7831
abscisic acid biosynthesis
-
-
PWY-695
acetaldehyde biosynthesis I
-
-
PWY-6333
acetaldehyde biosynthesis II
-
-
PWY-6330
acetate and ATP formation from acetyl-CoA III
-
-
PWY-8328
acetate conversion to acetyl-CoA
-
-
PWY0-1313
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
acetyl-CoA biosynthesis from citrate
-
-
PWY-5172
acetyl-CoA fermentation to butanoate
-
-
PWY-5676
acetylene degradation (anaerobic)
-
-
P161-PWY
acrylate degradation II
-
-
PWY-8180
acrylonitrile degradation I
-
-
PWY-7308
acyl carrier protein activation
-
-
PWY-6012-1
acyl carrier protein metabolism
-
-
PWY-6012
acyl-[acyl-carrier protein] thioesterase pathway
-
-
PWY-5142
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage III
-
-
PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenosine nucleotides degradation I
-
-
PWY-6596
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
adenosine ribonucleotides de novo biosynthesis
-
-
PWY-7219
adlupulone and adhumulone biosynthesis
-
-
PWY-7857
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
alkane biosynthesis II
-
-
PWY-7033
alkane oxidation
-
-
PWY-2724
all-trans-farnesol biosynthesis
-
-
PWY-6859
allantoin degradation to ureidoglycolate I (urea producing)
-
-
PWY-5697
allantoin degradation to ureidoglycolate II (ammonia producing)
-
-
PWY-5698
alpha-amyrin biosynthesis
-
-
PWY-5377
alpha-linolenate biosynthesis I (plants and red algae)
-
-
PWY-5997
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
alpha-tomatine degradation
-
-
PWY18C3-5
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
ammonia oxidation II (anaerobic)
-
-
P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
anandamide biosynthesis I
-
-
PWY-8051
anandamide biosynthesis II
-
-
PWY-8053
anteiso-branched-chain fatty acid biosynthesis
-
-
PWY-8173
apratoxin A biosynthesis
-
-
PWY-8361
arachidonate biosynthesis I (6-desaturase, lower eukaryotes)
-
-
PWY-5353
arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)
-
-
PWY-7601
arachidonate biosynthesis V (8-detaturase, mammals)
-
-
PWY-7725
arachidonate metabolites biosynthesis
-
-
PWY-8397
aromatic biogenic amine degradation (bacteria)
-
-
PWY-7431
arsenate detoxification I
-
-
PWY-8264
arsenate detoxification III
-
-
PWY-8263
arsenic detoxification (mammals)
-
-
PWY-4202
arsenic detoxification (plants)
-
-
PWY-8259
arsenic detoxification (yeast)
-
-
PWY-4621
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
ascorbate recycling (cytosolic)
-
-
PWY-6370
aspirin triggered resolvin D biosynthesis
-
-
PWY66-395
aspirin triggered resolvin E biosynthesis
-
-
PWY66-394
assimilatory sulfate reduction II
-
-
SULFMETII-PWY
assimilatory sulfate reduction III
-
-
PWY-6683
assimilatory sulfate reduction IV
-
-
PWY1ZNC-1
ATP biosynthesis
-
-
PWY-7980
atromentin biosynthesis
-
-
PWY-7518
avenanthramide biosynthesis
-
-
PWY-8157
bacilysin biosynthesis
-
-
PWY-7626
bacterial bioluminescence
-
-
PWY-7723
baicalein degradation (hydrogen peroxide detoxification)
-
-
PWY-7214
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
-
-
PWY-6444
beta-(1,4)-mannan degradation
-
-
PWY-7456
beta-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation
-
-
PWY-7586
beta-alanine biosynthesis II
-
-
PWY-3941
beta-D-glucuronide and D-glucuronate degradation
-
-
PWY-7247
betanidin degradation
-
-
PWY-5461
Bifidobacterium shunt
-
-
P124-PWY
bile acid biosynthesis, neutral pathway
biosynthesis of Lewis epitopes (H. pylori)
-
-
PWY-7833
biotin-carboxyl carrier protein assembly
-
-
PWY0-1264
bisabolene biosynthesis (engineered)
-
-
PWY-7102
brassicicene C biosynthesis
-
-
PWY-7517
bryostatin biosynthesis
-
-
PWY-8047
bupropion degradation
-
-
PWY66-241
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
-
-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
caffeine biosynthesis I
-
-
PWY-5037
caffeine biosynthesis II (via paraxanthine)
-
-
PWY-5038
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
camalexin biosynthesis
-
-
CAMALEXIN-SYN
cannabinoid biosynthesis
-
-
PWY-5140
capsaicin biosynthesis
-
-
PWY-5710
casbene biosynthesis
-
-
PWY-6304
catechol degradation to 2-hydroxypentadienoate I
-
-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
-
-
PWY-5419
CDP-6-deoxy-D-gulose biosynthesis
-
-
PWY-8139
CDP-diacylglycerol biosynthesis I
-
-
PWY-5667
CDP-diacylglycerol biosynthesis II
-
-
PWY0-1319
CDP-diacylglycerol biosynthesis III
-
-
PWY-5981
cell-surface glycoconjugate-linked phosphocholine biosynthesis
-
-
PWY-7886
cellulose degradation II (fungi)
-
-
PWY-6788
ceramide and sphingolipid recycling and degradation (yeast)
-
-
PWY-7119
ceramide degradation by alpha-oxidation
-
-
PWY66-388
chitin biosynthesis
-
-
PWY-6981
chitin deacetylation
-
-
PWY-7118
chitin degradation I (archaea)
-
-
PWY-6855
chitin degradation II (Vibrio)
-
-
PWY-6902
chitin degradation III (Serratia)
-
-
PWY-7822
chlorogenic acid degradation
-
-
PWY-6781
cholesterol degradation to androstenedione I (cholesterol oxidase)
-
-
PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
-
-
PWY-6946
choline biosynthesis I
-
-
PWY-3385
choline biosynthesis III
-
-
PWY-3561
chondroitin sulfate degradation I (bacterial)
-
-
PWY-6572
cinnamoyl-CoA biosynthesis
-
-
PWY-6457
cis-geranyl-CoA degradation
-
-
PWY-6672
cis-vaccenate biosynthesis
CO2 fixation into oxaloacetate (anaplerotic)
-
-
PWYQT-4429
coenzyme M biosynthesis II
-
-
PWY-6643
colupulone and cohumulone biosynthesis
-
-
PWY-5133
complex N-linked glycan biosynthesis (plants)
-
-
PWY-7920
complex N-linked glycan biosynthesis (vertebrates)
-
-
PWY-7426
coumarin biosynthesis (via 2-coumarate)
-
-
PWY-5176
creatine phosphate biosynthesis
-
-
PWY-6158
crepenynate biosynthesis
-
-
PWY-6013
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
-
-
PWY-7854
curacin A biosynthesis
-
-
PWY-8358
cutin biosynthesis
-
-
PWY-321
cyanate degradation
cyanide detoxification I
-
-
ASPSYNII-PWY
cyclic electron flow
-
-
PWY-8270
cycloartenol biosynthesis
-
-
PWY-8028
cytosolic NADPH production (yeast)
-
-
PWY-7268
D-galactose degradation I (Leloir pathway)
-
-
PWY-6317
D-myo-inositol (1,4,5)-trisphosphate biosynthesis
-
-
PWY-6351
D-myo-inositol-5-phosphate metabolism
-
-
PWY-6367
D-sorbitol biosynthesis I
-
-
PWY-5054
D-xylose degradation IV
-
-
PWY-7294
degradation of aromatic, nitrogen containing compounds
-
-
dermatan sulfate degradation I (bacterial)
-
-
PWY-7646
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
di-myo-inositol phosphate biosynthesis
-
-
PWY-6664
diacylglycerol and triacylglycerol biosynthesis
-
-
TRIGLSYN-PWY
diacylglycerol biosynthesis (PUFA enrichment in oilseed)
-
-
PWY-6804
diethylphosphate degradation
-
-
PWY-5491
dimethyl sulfide biosynthesis from methionine
-
-
PWY-7793
dimorphecolate biosynthesis
-
-
PWY-5368
dissimilatory sulfate reduction I (to hydrogen sufide))
-
-
DISSULFRED-PWY
diterpene phytoalexins precursors biosynthesis
divinyl ether biosynthesis II
-
-
PWY-5409
docosahexaenoate biosynthesis I (lower eukaryotes)
-
-
PWY-7053
docosahexaenoate biosynthesis III (6-desaturase, mammals)
-
-
PWY-7606
docosahexaenoate metabolites biosynthesis
-
-
PWY-8400
dopamine degradation
-
-
PWY6666-2
dTDP-beta-L-rhamnose biosynthesis
-
-
DTDPRHAMSYN-PWY
dTMP de novo biosynthesis (mitochondrial)
-
-
PWY66-385
ent-kaurene biosynthesis I
-
-
PWY-5032
enterobactin biosynthesis
-
-
ENTBACSYN-PWY
Entner-Doudoroff pathway I
-
-
PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
-
-
NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
-
-
PWY-2221
ephedrine biosynthesis
-
-
PWY-5883
ergosterol biosynthesis I
-
-
PWY-6075
Escherichia coli serotype O:127 O antigen biosynthesis
-
-
PWY-8231
Escherichia coli serotype O:86 O antigen biosynthesis
-
-
PWY-7290
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation III
-
-
PWY66-161
ethanol degradation IV
-
-
PWY66-162
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis II (microbes)
-
-
PWY-6853
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis IV (engineered)
-
-
PWY-7126
ethene biosynthesis V (engineered)
-
-
PWY-7124
ethylmalonyl-CoA pathway
-
-
PWY-5741
even iso-branched-chain fatty acid biosynthesis
-
-
PWY-8175
farnesene biosynthesis
-
-
PWY-5725
fatty acid alpha-oxidation I (plants)
-
-
PWY-2501
fatty acid beta-oxidation II (plant peroxisome)
-
-
PWY-5136
fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
-
-
PWY-6837
fatty acid beta-oxidation VI (mammalian peroxisome)
-
-
PWY66-391
fatty acid beta-oxidation VII (yeast peroxisome)
-
-
PWY-7288
fatty acid biosynthesis initiation (mitochondria)
-
-
PWY66-429
fatty acid biosynthesis initiation (plant mitochondria)
-
-
PWY-6799
fatty acid biosynthesis initiation (type I)
-
-
PWY-5966-1
fatty acid biosynthesis initiation (type II)
-
-
PWY-4381
fatty acid elongation -- saturated
-
-
FASYN-ELONG-PWY
fatty acid salvage
-
-
PWY-7094
Fe(II) oxidation
-
-
PWY-6692
fenchol biosynthesis II
-
-
PWY-6445
ferrichrome A biosynthesis
-
-
PWY-7571
firefly bioluminescence
-
-
PWY-7913
fluoroacetate and fluorothreonine biosynthesis
-
-
PWY-6644
folate transformations II (plants)
-
-
PWY-3841
folate transformations III (E. coli)
-
-
1CMET2-PWY
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
formaldehyde oxidation I
-
-
RUMP-PWY
formaldehyde oxidation II (glutathione-dependent)
-
-
PWY-1801
formate to nitrite electron transfer
-
-
PWY0-1585
fructose 2,6-bisphosphate biosynthesis
-
-
PWY66-423
fusicoccin A biosynthesis
-
-
PWY-6659
gamma-glutamyl cycle
-
-
PWY-4041
gamma-linolenate biosynthesis II (animals)
-
-
PWY-6000
ganglio-series glycosphingolipids biosynthesis
-
-
PWY-7836
GDP-alpha-D-glucose biosynthesis
-
-
PWY-5661
GDP-mannose biosynthesis
-
-
PWY-5659
geranyl diphosphate biosynthesis
-
-
PWY-5122
geranylgeranyl diphosphate biosynthesis
-
-
PWY-5120
germacrene biosynthesis
-
-
PWY-5733
gliotoxin biosynthesis
-
-
PWY-7533
globo-series glycosphingolipids biosynthesis
-
-
PWY-7838
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucose and glucose-1-phosphate degradation
-
-
GLUCOSE1PMETAB-PWY
glucose degradation (oxidative)
-
-
DHGLUCONATE-PYR-CAT-PWY
glucosylglycerol biosynthesis
-
-
PWY-7902
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glutathione-peroxide redox reactions
-
-
PWY-4081
glycerol degradation I
-
-
PWY-4261
glycerol degradation to butanol
-
-
PWY-7003
glycerol-3-phosphate shuttle
-
-
PWY-6118
glycerol-3-phosphate to fumarate electron transfer
-
-
PWY0-1582
glycine biosynthesis II
-
-
GLYCINE-SYN2-PWY
glycine cleavage
-
-
GLYCLEAV-PWY
glycogen biosynthesis I (from ADP-D-Glucose)
-
-
GLYCOGENSYNTH-PWY
glycogen biosynthesis II (from UDP-D-Glucose)
-
-
PWY-5067
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
PWY-7900
glycogen degradation I
-
-
GLYCOCAT-PWY
glycogen degradation II
-
-
PWY-5941
glycolate and glyoxylate degradation II
-
-
GLYOXDEG-PWY
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
glycosaminoglycan-protein linkage region biosynthesis
-
-
PWY-6557
glyoxylate assimilation
-
-
PWY-5744
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
glyphosate degradation III
-
-
PWY-7807
gondoate biosynthesis (anaerobic)
-
-
PWY-7663
gossypol biosynthesis
-
-
PWY-5773
guanine and guanosine salvage I
-
-
PWY-6620
guanosine nucleotides degradation I
-
-
PWY-6607
guanosine nucleotides degradation II
-
-
PWY-6606
guanosine nucleotides degradation III
-
-
PWY-6608
H. pylori 26695 O-antigen biosynthesis
-
-
PWY2DNV-5
heparan sulfate biosynthesis
-
-
PWY-6558
heparan sulfate degradation
-
-
PWY-7651
heterolactic fermentation
-
-
P122-PWY
histamine degradation
-
-
PWY-6181
hydrogen to fumarate electron transfer
-
-
PWY0-1576
hydroxylated fatty acid biosynthesis (plants)
-
-
PWY-6433
hypoglycin biosynthesis
-
-
PWY-5826
hypotaurine degradation
-
-
PWY-7387
i antigen and I antigen biosynthesis
-
-
PWY-7837
icosapentaenoate biosynthesis I (lower eukaryotes)
-
-
PWY-6958
icosapentaenoate biosynthesis II (6-desaturase, mammals)
-
-
PWY-7049
icosapentaenoate biosynthesis III (8-desaturase, mammals)
-
-
PWY-7724
icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)
-
-
PWY-7602
icosapentaenoate biosynthesis VI (fungi)
-
-
PWY-6940
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis III (bacteria)
-
-
PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
-
-
PWY-5025
indole-3-acetate biosynthesis VI (bacteria)
-
-
TRPIAACAT-PWY
inosine 5'-phosphate degradation
-
-
PWY-5695
inositol diphosphates biosynthesis
-
-
PWY-6369
inulin degradation
-
-
PWY-8314
ipsdienol biosynthesis
-
-
PWY-7410
isoprene biosynthesis II (engineered)
-
-
PWY-7391
jadomycin biosynthesis
-
-
PWY-6679
jasmonic acid biosynthesis
-
-
PWY-735
juniperonate biosynthesis
-
-
PWY-7619
justicidin B biosynthesis
-
-
PWY-6824
ketogenesis
-
-
PWY66-367
L-alanine biosynthesis II
-
-
ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation III
-
-
ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
-
-
PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-arabinose degradation IV
-
-
PWY-7295
L-arginine degradation I (arginase pathway)
-
-
ARGASEDEG-PWY
L-arginine degradation X (arginine monooxygenase pathway)
-
-
ARGDEG-V-PWY
L-ascorbate degradation II (bacterial, aerobic)
-
-
PWY-6961
L-ascorbate degradation III
-
-
PWY-6960
L-asparagine biosynthesis II
-
-
ASPARAGINESYN-PWY
L-asparagine degradation III (mammalian)
-
-
ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
-
-
ASPARTATESYN-PWY
L-aspartate degradation I
-
-
ASPARTATE-DEG1-PWY
L-aspartate degradation II (aerobic)
-
-
PWY-8291
L-aspartate degradation III (anaerobic)
-
-
PWY-8294
L-carnitine degradation II
-
-
PWY-3641
L-dopa and L-dopachrome biosynthesis
-
-
PWY-6481
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation II
-
-
GLUTDEG-PWY
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
L-glutamate degradation VI (to pyruvate)
-
-
PWY-5087
L-glutamate degradation XI (reductive Stickland reaction)
-
-
PWY-8190
L-glutamine biosynthesis I
-
-
GLNSYN-PWY
L-histidine degradation V
-
-
PWY-5031
L-homoserine biosynthesis
-
-
HOMOSERSYN-PWY
L-isoleucine biosynthesis IV
-
-
PWY-5104
L-isoleucine biosynthesis V
-
-
PWY-5108
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-malate degradation II
-
-
PWY-7686
L-methionine degradation III
-
-
PWY-5082
L-nicotianamine biosynthesis
-
-
PWY-5957
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine biosynthesis II
-
-
PWY-3462
L-phenylalanine degradation II (anaerobic)
-
-
ANAPHENOXI-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
-
-
PWY-8014
L-proline degradation I
-
-
PROUT-PWY
L-serine biosynthesis II
-
-
PWY-8011
L-tryptophan degradation IV (via indole-3-lactate)
-
-
TRPKYNCAT-PWY
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation VIII (to tryptophol)
-
-
PWY-5081
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
PWY-6307
L-tryptophan degradation XIII (reductive Stickland reaction)
-
-
PWY-8017
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine biosynthesis II
-
-
PWY-3461
L-tyrosine biosynthesis III
-
-
PWY-6120
L-tyrosine degradation I
-
-
TYRFUMCAT-PWY
L-tyrosine degradation II
-
-
PWY-5151
L-tyrosine degradation III
-
-
PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
-
-
PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
-
-
PWY-8016
L-valine degradation II
-
-
PWY-5057
lacinilene C biosynthesis
-
-
PWY-5828
lacto-series glycosphingolipids biosynthesis
-
-
PWY-7839
lanosterol biosynthesis
-
-
PWY-6132
leukotriene biosynthesis
-
-
PWY66-375
limonene degradation IV (anaerobic)
-
-
PWY-8029
linalool biosynthesis I
-
-
PWY-7182
linamarin degradation
-
-
PWY-3121
linoleate biosynthesis I (plants)
-
-
PWY-5995
linoleate biosynthesis II (animals)
-
-
PWY-6001
linoleate metabolites biosynthesis
-
-
PWY-8395
linustatin bioactivation
-
-
PWY-7091
lipid A-core biosynthesis (E. coli K-12)
-
-
LIPA-CORESYN-PWY
lipoxin biosynthesis
-
-
PWY66-392
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
long-chain fatty acid activation
-
-
PWY-5143
lotaustralin degradation
-
-
PWY-6002
lupeol biosynthesis
-
-
PWY-112
lupulone and humulone biosynthesis
-
-
PWY-5132
luteolin triglucuronide degradation
-
-
PWY-7445
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
mangrove triterpenoid biosynthesis
-
-
PWY-6109
maresin biosynthesis
-
-
PWY-8356
matairesinol biosynthesis
-
-
PWY-5466
melatonin degradation I
-
-
PWY-6398
melibiose degradation
-
-
PWY0-1301
menthol biosynthesis
-
-
PWY-3061
methane oxidation to methanol I
-
-
PWY-1641
Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
PWY-6146
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methyl indole-3-acetate interconversion
-
-
PWY-6303
methyl ketone biosynthesis (engineered)
-
-
PWY-7007
methyl phomopsenoate biosynthesis
-
-
PWY-7721
methylaspartate cycle
methylerythritol phosphate pathway I
-
-
NONMEVIPP-PWY
methylerythritol phosphate pathway II
-
-
PWY-7560
methylsalicylate degradation
-
-
PWY18C3-24
mevalonate pathway I (eukaryotes and bacteria)
-
-
PWY-922
mevalonate pathway II (haloarchaea)
-
-
PWY-6174
mevalonate pathway III (Thermoplasma)
-
-
PWY-7524
mevalonate pathway IV (archaea)
-
-
PWY-8125
mitochondrial NADPH production (yeast)
-
-
PWY-7269
mixed acid fermentation
-
-
FERMENTATION-PWY
mono-trans, poly-cis decaprenyl phosphate biosynthesis
-
-
PWY-6383
monoacylglycerol metabolism (yeast)
-
-
PWY-7420
monoterpene biosynthesis
-
-
PWY-3041
mucin core 1 and core 2 O-glycosylation
-
-
PWY-7433
mucin core 3 and core 4 O-glycosylation
-
-
PWY-7435
mupirocin biosynthesis
-
-
PWY-8012
mycobacterial sulfolipid biosynthesis
-
-
PWY-7746
mycobactin biosynthesis
-
-
PWY185E-1
mycolate biosynthesis
-
-
PWYG-321
mycothiol biosynthesis
-
-
PWY1G-0
myo-inositol biosynthesis
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
-
-
PWY-5653
NAD de novo biosynthesis I
-
-
PYRIDNUCSYN-PWY
NAD de novo biosynthesis III
-
-
PWY-8352
NAD de novo biosynthesis IV (anaerobic)
-
-
PWY-8277
NAD salvage (plants)
-
-
PWY-5381
NAD salvage pathway I (PNC VI cycle)
-
-
PYRIDNUCSAL-PWY
NAD salvage pathway III (to nicotinamide riboside)
-
-
NAD-BIOSYNTHESIS-II
NAD salvage pathway V (PNC V cycle)
-
-
PWY3O-4107
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to fumarate electron transfer
-
-
PWY0-1336
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
neolacto-series glycosphingolipids biosynthesis
-
-
PWY-7841
neolinustatin bioactivation
-
-
PWY-7092
nepetalactone biosynthesis
-
-
PWY-8069
nicotine biosynthesis
-
-
PWY-5316
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitrogen remobilization from senescing leaves
-
-
PWY-6549
nocardicin A biosynthesis
-
-
PWY-7797
noradrenaline and adrenaline degradation
-
-
PWY-6342
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
o-diquinones biosynthesis
-
-
PWY-6752
octane oxidation
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
-
-
PWY-7388
odd iso-branched-chain fatty acid biosynthesis
-
-
PWY-8174
oleate beta-oxidation
-
-
PWY0-1337
oleate beta-oxidation (isomerase-dependent, yeast)
-
-
PWY-7291
oleate biosynthesis I (plants)
-
-
PWY-5147
oleate biosynthesis II (animals and fungi)
-
-
PWY-5996
oleate biosynthesis III (cyanobacteria)
-
-
PWY-7587
oleate biosynthesis IV (anaerobic)
-
-
PWY-7664
oleoresin monoterpene volatiles biosynthesis
-
-
PWY-5423
ophiobolin F biosynthesis
-
-
PWY-7720
palmitate biosynthesis I (type I fatty acid synthase)
-
-
PWY-5994
palmitate biosynthesis II (type II fatty acid synthase)
-
-
PWY-5971
palmitate biosynthesis III
-
-
PWY-8279
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
-
-
PWY-6282
palmitoleate biosynthesis II (plants and bacteria)
-
-
PWY-5366
palmitoleate biosynthesis III (cyanobacteria)
-
-
PWY-7589
palmitoleate biosynthesis IV (fungi and animals)
-
-
PWY3O-1801
palmitoyl ethanolamide biosynthesis
-
-
PWY-8055
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
paspaline biosynthesis
-
-
PWY-7492
pectin degradation II
-
-
PWY-7248
pederin biosynthesis
-
-
PWY-8049
pentachlorophenol degradation
-
-
PCPDEG-PWY
pentacyclic triterpene biosynthesis
-
-
PWY-7251
pentose phosphate pathway (non-oxidative branch) I
-
-
NONOXIPENT-PWY
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
pentose phosphate pathway (oxidative branch) I
-
-
OXIDATIVEPENT-PWY
pentose phosphate pathway (partial)
-
-
P21-PWY
peptido-conjugates in tissue regeneration biosynthesis
-
-
PWY-8355
peptidoglycan recycling I
-
-
PWY0-1261
peptidoglycan recycling II
-
-
PWY-7883
perillyl aldehyde biosynthesis
-
-
PWY-6436
petrobactin biosynthesis
-
-
PWY-6289
petroselinate biosynthesis
-
-
PWY-5367
phenylethanol biosynthesis
-
-
PWY-5751
phenylmercury acetate degradation
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
pheomelanin biosynthesis
-
-
PWY-7917
phosphate acquisition
-
-
PWY-6348
phosphatidate biosynthesis (yeast)
-
-
PWY-7411
phosphatidate metabolism, as a signaling molecule
-
-
PWY-7039
phosphatidylcholine acyl editing
-
-
PWY-6803
phosphatidylcholine biosynthesis I
-
-
PWY3O-450
phosphatidylcholine biosynthesis II
-
-
PWY4FS-2
phosphatidylcholine biosynthesis VII
-
-
PWY-7470
phosphatidylcholine resynthesis via glycerophosphocholine
-
-
PWY-7367
phosphatidylethanolamine biosynthesis II
-
-
PWY4FS-6
phosphatidylinositol biosynthesis I (bacteria)
-
-
PWY-6580
phosphatidylinositol biosynthesis II (eukaryotes)
-
-
PWY-7625
phospholipases
-
-
LIPASYN-PWY
phospholipid desaturation
-
-
PWY-762
phospholipid remodeling (phosphatidate, yeast)
-
-
PWY-7417
phospholipid remodeling (phosphatidylcholine, yeast)
-
-
PWY-7416
phospholipid remodeling (phosphatidylethanolamine, yeast)
-
-
PWY-7409
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
photorespiration I
-
-
PWY-181
photorespiration II
-
-
PWY-8362
photorespiration III
-
-
PWY-8363
photosynthesis light reactions
-
-
PWY-101
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7218
phytate degradation I
-
-
PWY-4702
phytochelatins biosynthesis
-
-
PWY-6745
phytochromobilin biosynthesis
-
-
PWY-7170
phytol degradation
-
-
PWY66-389
phytosterol biosynthesis (plants)
-
-
PWY-2541
plasmalogen biosynthesis I (aerobic)
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
plaunotol biosynthesis
-
-
PWY-6691
poly-hydroxy fatty acids biosynthesis
-
-
PWY-6710
propanoyl-CoA degradation II
-
-
PWY-7574
protectin biosynthesis
-
-
PWY-8357
protective electron sinks in the thylakoid membrane (PSII to PTOX)
-
-
PWY1YI0-7
protein N-glycosylation initial phase (eukaryotic)
-
-
MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
protein N-glycosylation processing phase (endoplasmic reticulum, yeast)
-
-
PWY-7918
protein N-glycosylation processing phase (plants and animals)
-
-
PWY-7919
protein O-[N-acetyl]-glucosylation
-
-
PWY-7437
protein S-nitrosylation and denitrosylation
-
-
PWY-7798
protein ubiquitination
-
-
PWY-7511
purine deoxyribonucleosides degradation I
-
-
PWY-7179
purine deoxyribonucleosides degradation II
-
-
PWY-7179-1
purine ribonucleosides degradation
-
-
PWY0-1296
putrescine degradation III
-
-
PWY-0
pyrimidine deoxyribonucleotides biosynthesis from CTP
-
-
PWY-7210
pyruvate decarboxylation to acetyl CoA II
-
-
PWY-6970
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to acetate II
-
-
PWY-5482
pyruvate fermentation to acetate V
-
-
PWY-5537
pyruvate fermentation to acetate VIII
-
-
PWY-5768
pyruvate fermentation to acetoin III
-
-
PWY3O-440
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive glycine pathway of autotrophic CO2 fixation
-
-
PWY-8303
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
resolvin D biosynthesis
-
-
PWY66-397
retinol biosynthesis
-
-
PWY-6857
ricinoleate biosynthesis
-
-
PWY-7618
rosmarinic acid biosynthesis I
-
-
PWY-5048
Rubisco shunt
-
-
PWY-5723
salidroside biosynthesis
-
-
PWY-6802
salinosporamide A biosynthesis
-
-
PWY-6627
Salmonella enterica serotype O:13 O antigen biosynthesis
-
-
PWY-8230
sciadonate biosynthesis
-
-
PWY-6598
secologanin and strictosidine biosynthesis
-
-
PWY-5290
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
selenate reduction
-
-
PWY-6932
seleno-amino acid detoxification and volatilization I
-
-
PWY-6931
seleno-amino acid detoxification and volatilization III
-
-
PWY-6933
serotonin degradation
-
-
PWY-6313
sesamin biosynthesis
-
-
PWY-5469
sitosterol degradation to androstenedione
-
-
PWY-6948
sorgoleone biosynthesis
-
-
PWY-5987
sphingolipid biosynthesis (mammals)
-
-
PWY-7277
sphingolipid biosynthesis (plants)
-
-
PWY-5129
sphingomyelin metabolism
-
-
PWY3DJ-11281
sphingosine and sphingosine-1-phosphate metabolism
-
-
PWY3DJ-11470
sporopollenin precursors biosynthesis
-
-
PWY-6733
stachyose degradation
-
-
PWY-6527
starch biosynthesis
-
-
PWY-622
starch degradation I
-
-
PWY-842
starch degradation II
-
-
PWY-6724
starch degradation III
-
-
PWY-6731
starch degradation V
-
-
PWY-6737
stearate biosynthesis I (animals)
-
-
PWY-5972
stearate biosynthesis II (bacteria and plants)
-
-
PWY-5989
stearate biosynthesis III (fungi)
-
-
PWY3O-355
stearate biosynthesis IV
-
-
PWY-8280
stellatic acid biosynthesis
-
-
PWY-7736
sterol:steryl ester interconversion (yeast)
-
-
PWY-7424
stigma estolide biosynthesis
-
-
PWY-6453
streptomycin biosynthesis
-
-
PWY-5940
streptorubin B biosynthesis
-
-
PWY1A0-6120
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
-
-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
succinate to plastoquinol oxidase
-
-
PWY1YI0-8
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation IV (sucrose phosphorylase)
-
-
PWY-5384
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sulfate activation for sulfonation
-
-
PWY-5340
sulfite oxidation II
-
-
PWY-5279
sulfite oxidation III
-
-
PWY-5278
sulfolactate degradation III
-
-
PWY-6638
sulfur volatiles biosynthesis
-
-
PWY-6736
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fatty acid biosynthesis initiation
-
-
FASYN-INITIAL-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
-
-
GLYCOLYSIS-E-D
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass
-
-
GLYCOLYSIS-TCA-GLYOX-BYPASS
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of nicotine biosynthesis
-
-
PWY-7342
superpathway of phospholipid biosynthesis II (plants)
-
-
PHOSLIPSYN2-PWY
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
tea aroma glycosidic precursor bioactivation
-
-
PWY-7114
terminal O-glycans residues modification (via type 2 precursor disaccharide)
-
-
PWY-7434
tetradecanoate biosynthesis (mitochondria)
-
-
PWY66-430
tetrahydrofolate biosynthesis I
-
-
PWY-6614
theobromine biosynthesis I
-
-
PWY-5039
thioredoxin pathway
-
-
THIOREDOX-PWY
thyroid hormone biosynthesis
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
trans, trans-farnesyl diphosphate biosynthesis
-
-
PWY-5123
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
trehalose degradation I (low osmolarity)
-
-
TREDEGLOW-PWY
trehalose degradation II (cytosolic)
-
-
PWY0-1182
trehalose degradation IV
-
-
PWY-2722
trehalose degradation V
-
-
PWY-2723
triacylglycerol degradation
-
-
LIPAS-PWY
tRNA processing
-
-
PWY0-1479
tunicamycin biosynthesis
-
-
PWY-7821
tylosin biosynthesis
-
-
PWY-7415
type IV lipoteichoic acid biosynthesis (S. pneumoniae)
-
-
PWY-7818
UDP-alpha-D-glucose biosynthesis
-
-
PWY-7343
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
ultra-long-chain fatty acid biosynthesis
-
-
PWY-8041
urate conversion to allantoin I
-
-
PWY-5691
urea degradation II
-
-
PWY-5704
UTP and CTP dephosphorylation I
-
-
PWY-7185
UTP and CTP dephosphorylation II
-
-
PWY-7177
valproate beta-oxidation
-
-
PWY-8182
vancomycin resistance I
-
-
PWY-6454
vanillin biosynthesis I
-
-
PWY-5665
vernolate biosynthesis III
-
-
PWY-6917
very long chain fatty acid biosynthesis I
-
-
PWY-5080
very long chain fatty acid biosynthesis II
-
-
PWY-7036
viridicatumtoxin biosynthesis
-
-
PWY-7659
vitamin K-epoxide cycle
wax esters biosynthesis II
-
-
PWY-5885
xanthine and xanthosine salvage
-
-
SALVPURINE2-PWY
xanthommatin biosynthesis
-
-
PWY-8249
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
bile acid biosynthesis, neutral pathway
-
-
PWY-6061
cis-vaccenate biosynthesis
-
-
PWY-5973
cyanate degradation
-
-
CYANCAT-PWY
diterpene phytoalexins precursors biosynthesis
-
-
PWY-2981
methylaspartate cycle
-
-
PWY-6728
myo-inositol biosynthesis
-
-
PWY-2301
octane oxidation
-
-
P221-PWY
phenylmercury acetate degradation
-
-
P641-PWY
suberin monomers biosynthesis
-
-
PWY-1121
thyroid hormone biosynthesis
-
-
PWY-6241
vitamin K-epoxide cycle
-
-
PWY-7999
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
2934, 3058, 3228, 3243, 4947, 30315, 34334, 37572, 37577, 37620, 94488, 114203, 114206, 136102, 170727, 171187, 246662, 286742, 286891, 392049, 392729, 393081, 393082, 438916, 438918, 438919, 488198, 488894, 638016, 638494, 638761, 640444, 641364, 641434, 641604, 641616, 644373, 644412, 648606, 648607, 648609, 648610, 648611, 648612, 654008, 654378, 658100, 663767, 663782, 664033, 664034, 664103, 664166, 664730, 664819, 665780, 666328, 666379, 666976, 666993, 668777, 670681, 675754, 675755, 676689, 683033, 683062, 683072, 683073, 683074, 683115, 683197, 683265, 683275, 683282, 683339, 683446, 683535, 683540, 683573, 683574, 683576, 683591, 683597, 683598, 683626, 683680, 683727, 683830, 683859, 683882, 683912, 683967, 683980, 683998, 684058, 684094, 684098, 684100, 684103, 684106, 694240, 695562, 698641, 698877, 700800, 707114, 707125, 709192, 713231, 713233, 714088, 714099, 714687, 714784, 714904, 716406, 730108, 731012, 731351, 731676, 731786, 732952, 732953, 733282, 734603, 737051, 742212, 745739, 746697, 747240, 748876, 757544, 758000, 759985
-
-
-
438427, 438430, 438434, 438436, 438438, 438439, 438440, 438445, 438446, 659221, 664180, 665576, 675754, 677806, 683164, 691016, 710417, 710637, 715587, 732064, 732343, 752209, 757544
SwissProt
-
669827, 701928, 710244, 716452, 717013, 720640, 730563, 736321, 745637, 748876, 757164, 757544, 763054
A1A442, A9XK92, A9XUG5, B9RC08, B9RDZ7, B9RHW5, B9RK42, B9RXW0, B9S9Z3, B9SIL7, B9T5W1, B9T625, C7B9C0, F2VR35, O65039, P17815
UniProt
castor bean
33129, 33138, 135446, 246388, 246664, 246665, 286658, 286822, 288340, 437991, 438915, 486382, 488894, 638470, 638483, 640315, 645298, 646314, 646587, 646894, 646895, 646920, 646923, 646924, 653476, 695541
-
-
castor bean, cv. Baker 296, dwarf, hybrid, plastid and cytosolic isoenzymes
-
-
harvested from the field around the University Campus (Biochemistry and Biological Sciences Faculty, UNL, Santa Fe, Argentina) in 2011 and 2013
UniProt
seven full-length ricin family member ricin-A-chain, RTA, and ricin-like proteins RLP1-6
-
-
wild-type and OLE-1 mutant strain i.e. high-oleic castor mutant
SwissProt
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
hypocotyl portion of stem, high activity during early development
additional information
-
storage seed oil is mobilized into the cotyledons from endosperm
-
3058, 33129, 246662, 246664, 286822, 286857, 286877, 286891, 348924, 392729, 486382, 488894, 638470, 638483, 640315, 640440, 641364, 642086, 642089, 642092, 642901, 644412, 645298, 645397, 653476, 663275, 670681, 675754, 701928, 714784
-
both PDAT1A and PDAT2 are expressed in the developing endosperm, with PDAT2 showing double the transcript levels of PDAT1A. No expression of RcPDAT1B in castor endosperm
-
developing, maximal at stage 7 of endosperm development, overview
-
94488, 136102, 286857, 286877, 286891, 640440, 641616, 642092, 657137, 675755, 713233, 717013, 720640, 742212, 763105
-
BTPC is present in leaf buds and young expanding leaves, but undetectable in fully expanded leaves
-
DGAT2 is 18fold more highly expressed in seeds than in leaves and shows temporal specific expression during seed development, while DGAT1 shows little dfference in expression in seeds versus leaves, overview
-
3228, 3243, 30315, 37572, 286857, 286877, 393081, 393082, 394368, 438430, 438438, 438915, 438919, 638470, 638483, 641567, 641569, 645397, 646923, 646924, 654008, 654369, 659835, 663782, 664103, 664166, 664730, 665576, 666328, 666379, 666976, 669827, 675754, 676689, 683403, 683912, 697014, 700800, 704531, 709192, 710244, 710417, 714088, 714092, 714904, 720737, 726916, 727516, 728484, 731351, 732952, 732953, 733282, 739381, 756724, 757544
-
DGAT2 is 18fold more highly expressed in seeds than in leaves and shows temporal specific expression during seed development, while DGAT1 shows little dfference in expression in seeds versus leaves, overview
fatty acid profiles during the development of wild-type castor bean seeds and OLE-1 mutant seeds, overview
germinated seed, expression level is similar to ubiquitin
-
germinating, enzyme expression throughout seed germination at levels considerably enhanced from that in the dormant seed, no expression in immature seed, expression profile, overview
in castor oil seed, the NAD-GAPDH activity slightly increases and total protein levels do not significantly change in the first half of seed development but both abruptly decreases in the second part of development, when triacylglycerol synthesis and storage begin
-
present in the seed coat during the final stages of sclerification but absent from the caruncle
-
-
infected with the fungus Rhizpus stolonifer, no detectable levels of casbene synthetase mRNA in healthy seedlings
additional information
abundant protein in the companion cell sieve element complex
additional information
-
BTPC is abundant in the inner integument, cotyledon, and endosperm of developing seeds
additional information
expression is negligible in embryos and the endosperm of germinated seeds
additional information
no expression in mature leaf, stem, and root, the enzyme expression decreases during germination, developmental and tissue-specific distribution
additional information
-
the precursor enzyme is synthesized at membrane-bound polysomes in the cytoplasm
additional information
transcripts are present in all tissues examined. Enzyme is expressed constitutively over the whole time period examined
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
-
the enzyme enters target cells via its cell surface receptor
-
-
associated to the surface of the oil body membrane in endosperm
-
purified recombinant enzyme interacts with plasmodesmata to both induce an increase in size exclusion limit and mediate its own cell-to-cell trafficking
additional information
-
upon collapse of the nucellar cells, the content of the ricinosomes is released into the cytoplasm
-
3228, 3243, 33620, 286822, 286857, 286877, 286891, 641568, 641616, 645397, 663275, 676689, 714092, 714099, 715768, 736321, 763105
a C-terminal fluorescent fusion localizes to the cytosol in tobacco protoplasts
-
the plant-type phosphoenolpyruvate carboxylase-containing class-1 phosphoenolpyruvate carboxylase is entirely cytosolic
-
-
stably membrane-bound at 37°C, even under sodium carbonate treatment at pH 11.5, extractable at 20°C
an integral membrane protein, proposed topological model, overview
-
-
microsomal preparations from castor bean seeds have high GPCAT activity
-
-
plant-type and bacterial-type phosphoenolpyruvate carboxylase (PEPC) interact in vivo as a class-2 PEPC complex that associates with the surface of mitochondria
an N-terminal fluorescent fusion protein colocalizes with an peroxisomal marker in tobacco protoplasts
-
distinct from mitochondrial enzyme, different subunit composition
additional information
-
in ricinosomes, deriving from the endoplasmic reticulum, both pro CysEp and mature CysEp are present in protein extracts of the nucellar tissues during seed development
-
additional information
phylogenetic analysis shows that plant PDAT can be grouped into four clades, two of which have one putative transmembrane domain (TMD) while the other two are predicted to be entirely soluble. The majority of PDAT in the database have the single-predicted TMD consisting of a small cytosolic N-terminus and a large C-terminal domain in the endoplasmic reticulum lumen. The N-terminal region is hydrophilic with arginine clusters similar to those observed in DGAT1
-
additional information
-
proenzyme is probably attached to its storage-protein substrates
-
additional information
-
the predicted RcKSL3 aa sequence does appear to have a significantly longer N-terminal transit peptide than the other RcKSL
-
LINKS TO OTHER DATABASES (specific for Ricinus communis)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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