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Information on Organism Pseudomonas putida

Synonyms:
Arthrobacter siderocapsulatus Dubinina and Zhdanov 1975 (Approved Lists 1980); Arthrobacter siderocapsulatus Dubinin (sic) and Zhdanov 1975; Arthrobacter siderocapsulatus; ATCC 12633; "Bacillus fluorescens putidus" Flugge 1886; Bacillus fluorescens putidus; Bacillus putidus; "Bacillus putidus" Trevisan 1889; bacterium ASFP-1; bacterium MASFP-4; BKM-B N 1122 [[Arthrobacter siderocapsulatus Dubinina and Zhdanov 1975 (Approved Lists 1980)]]; CCUG 12690; CFBP 2066; CIP 52.191; DSM 291; HAMBI 7; IAM 1236; ICPB 2963; IFO 14164; JCM 13063; JCM 20120; LMG 2257; LMG:2257; NBRC 14164; NCAIM B.01634; NCCB 68020; NCCB 72006; NCIB 9494; NCIB:9494; NCIMB 11286 [[Arthrobacter siderocapsulatus Dubinina and Zhdanov 1975 (Approved Lists 1980)]]; NCTC 10936; Pseudomonas arvilla C-1; Pseudomonas arvilla; "Pseudomonas convexa" Chester 1901; Pseudomonas convexa; "Pseudomonas eisenbergii" Migula 1900; Pseudomonas eisenbergii; "Pseudomonas incognita" Chester 1901; Pseudomonas incognita; "Pseudomonas ovalis" Chester 1901; Pseudomonas ovalis; Pseudomonas putida HK5; Pseudomonas putida; Pseudomonas putida (Trevisan 1889) Migula 1895; Pseudomonas rugosa; "Pseudomonas rugosa" (Wright 1895) Chester 1901; Pseudomonas sp. ACP_03; Pseudomonas sp. BW11M1; Pseudomonas sp. CT363; Pseudomonas sp. DRA525; Pseudomonas sp. ECT1/2016; Pseudomonas sp. ECT2/2016; Pseudomonas sp. ETC3/2016; Pseudomonas sp. FAR1/2016; Pseudomonas sp. GM4FR; Pseudomonas sp. KDB25; Pseudomonas sp. KDS 6; Pseudomonas sp. PSE3; Pseudomonas sp. PT1/2016; Pseudomonas sp. PX-A-Ps.sp2; Pseudomonas sp. TAU2/2016; Pseudomonas sp. TC29-1; Pseudomonas sp. UF1/2016; "Pseudomonas striata" Chester 1901; Pseudomonas striata; Pseudomanas putida;
Word Map for Organism Pseudomonas putida
TaxTree of Organism Pseudomonas putida
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Gammaproteobacteria can be found in Brenda BRENDA pathways(class)
Pseudomonadales can be found in Brenda BRENDA pathways(order)
Pseudomonadaceae can be found in Brenda BRENDA pathways(family)
Pseudomonas can be found in Brenda BRENDA pathways(genus)
Pseudomonas putida group can be found in Brenda BRENDA pathways(species group)
Pseudomonas putida can be found in Brenda BRENDA pathways(species)
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EC NUMBER
COMMENTARY hide
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(+)-camphor biosynthesis
-
-
PWY-6990
(-)-camphor biosynthesis
-
-
PWY-6991
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
-
-
PWY-7726
(5R)-carbapenem carboxylate biosynthesis
(5Z)-dodecenoate biosynthesis I
-
-
PWY0-862
(5Z)-dodecenoate biosynthesis II
-
-
PWY-7858
(8E,10E)-dodeca-8,10-dienol biosynthesis
-
-
PWY-7654
(Kdo)2-lipid A biosynthesis (E. coli)
-
-
KDO-LIPASYN-PWY
(Kdo)2-lipid A biosynthesis (generic)
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-
PWY-8285
(Kdo)2-lipid A biosynthesis (H. pylori)
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-
PWY2DNV-2
(Kdo)2-lipid A biosynthesis (P. gingivalis)
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-
PWY-8247
(Kdo)2-lipid A biosynthesis (P. putida)
-
-
PWY-8075
(Kdo)2-lipid A biosynthesis I (Brucella)
-
-
PWY2B4Q-7
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7216
(R)-camphor degradation
-
-
P601-PWY
(R)-cysteate degradation
-
-
PWY-6642
(R,R)-butanediol biosynthesis
-
-
PWY-5951
(R,R)-butanediol degradation
-
-
PWY3O-246
(S)-camphor degradation
-
-
PWY-6989
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
(S)-reticuline biosynthesis
-
-
(S)-reticuline biosynthesis I
-
-
PWY-3581
(S)-reticuline biosynthesis II
-
-
PWY-6133
1,2,4,5-tetrachlorobenzene degradation
-
-
PWY-6099
1,2,4-trichlorobenzene degradation
-
-
PWY-6091
1,2-dichlorobenzene degradation
-
-
PWY-6090
1,2-dichloroethane degradation
-
-
12DICHLORETHDEG-PWY
1,2-propanediol biosynthesis from lactate (engineered)
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-
PWY-7541
1,3-dichlorobenzene degradation
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-
PWY-6081
1,3-dimethylbenzene degradation to 3-methylbenzoate
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-
PWY-5428
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,4-dichlorobenzene degradation
-
-
14DICHLORBENZDEG-PWY
1,4-dimethylbenzene degradation to 4-methylbenzoate
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-
PWY-5429
1,5-anhydrofructose degradation
-
-
PWY-6992
1-butanol autotrophic biosynthesis (engineered)
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-
PWY-6886
1-methylpyrrolinium biosynthesis
-
-
PWY-5315
10-cis-heptadecenoyl-CoA degradation (yeast)
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-
PWY-7337
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
-
-
PWY-7339
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
-
-
PWY-7338
11-oxyandrogens biosynthesis
-
-
PWY-8202
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
-
-
PWY-4661
1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)
-
-
PWY-6372
2'-deoxymugineic acid phytosiderophore biosynthesis
-
-
PWY-5912
2,2'-dihydroxybiphenyl degradation
-
-
PWY-7009
2,3-dihydroxybenzoate biosynthesis
-
-
PWY-5901
2,3-dihydroxybenzoate degradation
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-
PWY-7480
2,4,5-trichlorophenoxyacetate degradation
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-
PWY-6200
2,4,6-trichlorophenol degradation
-
-
PWY-6178
2,4-dichlorophenoxyacetate degradation
-
-
PWY-6085
2,4-dichlorotoluene degradation
-
-
PWY-6190
2,4-dinitrotoluene degradation
-
-
PWY-5642
2,4-xylenol degradation to protocatechuate
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-
PWY-7703
2,5-dichlorotoluene degradation
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-
PWY-6191
2,5-xylenol and 3,5-xylenol degradation
-
-
PWY-7698
2-amino-3-carboxymuconate semialdehyde degradation to 2-hydroxypentadienoate
-
-
PWY-5654
2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA
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-
PWY-5652
2-amino-3-hydroxycyclopent-2-enone biosynthesis
-
-
PWY-7536
2-aminoethylphosphonate degradation I
-
-
PHOSPHONOTASE-PWY
2-aminophenol degradation
-
-
PWY-6210
2-arachidonoylglycerol biosynthesis
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-
PWY-8052
2-carboxy-1,4-naphthoquinol biosynthesis
-
-
PWY-5837
2-chloroacrylate degradation I
-
-
PWY-7425
2-chlorobenzoate degradation
-
-
PWY-6221
2-deoxy-alpha-D-ribose 1-phosphate degradation
-
-
PWY-7180
2-deoxy-D-glucose 6-phosphate degradation
-
-
PWY-8121
2-deoxy-D-ribose degradation I
-
-
PWY-8060
2-deoxy-D-ribose degradation II
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-
PWY-8058
2-hydroxybiphenyl degradation
-
-
PWY-7008
2-hydroxypenta-2,4-dienoate degradation
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-
PWY-5162
2-methyl-branched fatty acid beta-oxidation
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-
PWY-8181
2-methylcitrate cycle I
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-
PWY0-42
2-methylcitrate cycle II
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-
PWY-5747
2-methylpropene degradation
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-
PWY-7778
2-nitrobenzoate degradation I
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-
PWY-5647
2-nitrobenzoate degradation II
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-
PWY-5648
2-nitrophenol degradation
-
-
PWY-5636
2-nitrotoluene degradation
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-
PWY-5641
2-oxobutanoate degradation I
-
-
PWY-5130
2-oxobutanoate degradation II
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-
2OXOBUTYRATECAT-PWY
2-oxoglutarate decarboxylation to succinyl-CoA
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-
PWY-5084
2-oxoisovalerate decarboxylation to isobutanoyl-CoA
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-
PWY-5046
3,4,6-trichlorocatechol degradation
-
-
PWY-6094
3,4-dichlorobenzoate degradation
-
-
PWY-6217
3,4-dichlorotoluene degradation
-
-
PWY-6192
3,5-dichlorocatechol degradation
-
-
PWY-6084
3,5-dimethoxytoluene biosynthesis
-
-
PWY-7076
3,6-anhydro-alpha-L-galactopyranose degradation
-
-
PWY-7562
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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-
CHLOROPHYLL-SYN
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
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PWY-5531
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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-
PWY-7159
3-(4-hydroxyphenyl)pyruvate biosynthesis
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PWY-5886
3-chlorobenzoate degradation II (via protocatechuate)
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-
PWY-6216
3-chlorocatechol degradation
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-
3-chlorocatechol degradation I (ortho)
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-
PWY-6089
3-chlorocatechol degradation II (ortho)
-
-
PWY-6193
3-chlorocatechol degradation III (meta pathway)
-
-
PWY-6214
3-chlorotoluene degradation I
-
-
PWY-6103
3-chlorotoluene degradation II
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-
PWY-6104
3-dehydroquinate biosynthesis I
-
-
PWY-6164
3-dehydroquinate biosynthesis II (archaea)
-
-
PWY-6160
3-hydroxy-4-methyl-anthranilate biosynthesis I
-
-
PWY-7717
3-hydroxy-4-methyl-anthranilate biosynthesis II
-
-
PWY-7765
3-hydroxypropanoate cycle
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-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-methyl-branched fatty acid alpha-oxidation
-
-
PWY66-387
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
3-methylquinoline degradation
-
-
PWY-721
3-oxoadipate degradation
-
-
PWY-2361
3-phenylpropanoate degradation
-
-
P281-PWY
3-phenylpropionate degradation
-
-
4,5-dichlorocatechol degradation
-
-
PWY-6093
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II
-
-
PWY-7282
4-amino-3-hydroxybenzoate degradation
-
-
PWY-7006
4-aminobutanoate degradation I
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-
PWY-6535
4-aminobutanoate degradation II
-
-
PWY-6537
4-aminobutanoate degradation III
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-
PWY-6536
4-aminobutanoate degradation V
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-
PWY-5022
4-aminophenol degradation
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-
PWY-7081
4-chloro-2-methylphenoxyacetate degradation
-
-
PWY-6086
4-chlorobenzoate degradation
-
-
PWY-6215
4-chlorocatechol degradation
-
-
PWY-6087
4-chloronitrobenzene degradation
-
-
PWY-5645
4-coumarate degradation (aerobic)
-
-
PWY-8002
4-coumarate degradation (anaerobic)
-
-
PWY-7046
4-deoxy-L-threo-hex-4-enopyranuronate degradation
-
-
PWY-6507
4-ethylphenol degradation (anaerobic)
-
-
PWY-6080
4-hydroxy-2(1H)-quinolone biosynthesis
-
-
PWY-6661
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxy-4-methyl-L-glutamate biosynthesis
-
-
PWY-7701
4-hydroxyacetophenone degradation
-
-
PWY-7002
4-hydroxybenzoate biosynthesis I (eukaryotes)
-
-
PWY-5754
4-hydroxybenzoate biosynthesis III (plants)
-
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PWY-6435
4-hydroxymandelate degradation
4-hydroxyphenylacetate degradation
4-methylcatechol degradation (ortho cleavage)
-
-
PWY-6185
4-methylphenol degradation to protocatechuate
-
-
PWY-7700
4-nitrophenol degradation I
-
-
PWY-5487
4-nitrophenol degradation II
-
-
PWY-5488
4-nitrotoluene degradation II
-
-
PWY-5644
4-oxopentanoate degradation
-
-
PWY-7948
4-sulfocatechol degradation
-
-
PWY-6041
5-aminoimidazole ribonucleotide biosynthesis I
-
-
PWY-6121
5-aminoimidazole ribonucleotide biosynthesis II
-
-
PWY-6122
5-chloro-3-methyl-catechol degradation
-
-
PWY-6102
5-hydroxymethylfurfural degradation
-
-
PWY-6995
5-nitroanthranilate degradation
-
-
PWY-7044
5-oxo-L-proline metabolism
-
-
PWY-7942
6-gingerol analog biosynthesis (engineered)
-
-
PWY-6920
8-amino-7-oxononanoate biosynthesis I
-
-
PWY-6519
8-amino-7-oxononanoate biosynthesis III
-
-
PWY-6578
8-amino-7-oxononanoate biosynthesis IV
-
-
PWY-8203
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
-
-
PWY-7340
9-lipoxygenase and 9-allene oxide synthase pathway
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-
PWY-5407
ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
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-
PWY-7832
ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide
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PWY-7831
Ac/N-end rule pathway
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-
PWY-7800
Acarbose and validamycin biosynthesis
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-
acetaldehyde biosynthesis I
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PWY-6333
acetaldehyde biosynthesis II
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-
PWY-6330
acetate and ATP formation from acetyl-CoA I
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-
PWY0-1312
acetate and ATP formation from acetyl-CoA III
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-
PWY-8328
acetate conversion to acetyl-CoA
-
-
PWY0-1313
acetate fermentation
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-
acetoacetate degradation (to acetyl CoA)
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ACETOACETATE-DEG-PWY
acetoin degradation
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-
acetone degradation I (to methylglyoxal)
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-
PWY-5451
acetone degradation III (to propane-1,2-diol)
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-
PWY-7466
acetyl CoA biosynthesis
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-
acetyl-CoA fermentation to butanoate
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-
PWY-5676
acetylene degradation (anaerobic)
-
-
P161-PWY
acridone alkaloid biosynthesis
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-
PWY-5958
acrylonitrile degradation I
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-
PWY-7308
acrylonitrile degradation II
-
-
PWY-7309
actinomycin D biosynthesis
-
-
PWY-7718
acyl carrier protein activation
-
-
PWY-6012-1
acyl carrier protein metabolism
-
-
PWY-6012
adamantanone degradation
-
-
P481-PWY
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage III
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-
PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenosine nucleotides degradation I
-
-
PWY-6596
adenosine nucleotides degradation II
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-
SALVADEHYPOX-PWY
adenosine ribonucleotides de novo biosynthesis
-
-
PWY-7219
adipate biosynthesis
-
-
PWY-8347
adipate degradation
adlupulone and adhumulone biosynthesis
-
-
PWY-7857
aerobactin biosynthesis
aerobic respiration I (cytochrome c)
-
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
aerobic toluene degradation
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-
Aflatoxin biosynthesis
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-
alanine metabolism
-
-
alanine racemization
-
-
PWY-8072
Alanine, aspartate and glutamate metabolism
-
-
aldoxime degradation
-
-
P345-PWY
alginate degradation
-
-
PWY-6986
alkane biosynthesis I
-
-
PWY-7032
alkane biosynthesis II
-
-
PWY-7033
alkane oxidation
-
-
PWY-2724
allantoin degradation
-
-
allantoin degradation to ureidoglycolate I (urea producing)
-
-
PWY-5697
allantoin degradation to ureidoglycolate II (ammonia producing)
-
-
PWY-5698
allopregnanolone biosynthesis
-
-
PWY-7455
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
alpha-Linolenic acid metabolism
-
-
alpha-tomatine degradation
-
-
PWY18C3-5
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
Amino sugar and nucleotide sugar metabolism
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-
Aminoacyl-tRNA biosynthesis
-
-
Aminobenzoate degradation
-
-
aminopropylcadaverine biosynthesis
-
-
PWY0-1303
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
ammonia oxidation I (aerobic)
-
-
AMMOXID-PWY
ammonia oxidation II (anaerobic)
-
-
P303-PWY
ammonia oxidation III
-
-
PWY-2242
anaerobic aromatic compound degradation (Thauera aromatica)
-
-
BENZCOA-PWY
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
anandamide biosynthesis I
-
-
PWY-8051
anandamide biosynthesis II
-
-
PWY-8053
anandamide degradation
-
-
PWY6666-1
anapleurotic synthesis of oxalacetate
-
-
androgen and estrogen metabolism
-
-
androgen biosynthesis
-
-
PWY66-378
androstenedione degradation I (aerobic)
-
-
PWY-6944
androstenedione degradation II (anaerobic)
-
-
PWY-8152
ansatrienin biosynthesis
-
-
PWY-8040
anteiso-branched-chain fatty acid biosynthesis
-
-
PWY-8173
anthranilate degradation I (aerobic)
-
-
PWY-6079
apratoxin A biosynthesis
-
-
PWY-8361
arachidonate biosynthesis
-
-
arachidonate metabolites biosynthesis
-
-
PWY-8397
Arachidonic acid metabolism
-