Information on Organism Pseudomonas putida

Synonyms:
Arthrobacter siderocapsulatus Dubinina and Zhdanov 1975 (Approved Lists 1980); Arthrobacter siderocapsulatus Dubinin (sic) and Zhdanov 1975; Arthrobacter siderocapsulatus; ATCC 12633; "Bacillus fluorescens putidus" Flugge 1886; Bacillus fluorescens putidus; Bacillus putidus; "Bacillus putidus" Trevisan 1889; bacterium ASFP-1; bacterium MASFP-4; BKM-B N 1122 [[Arthrobacter siderocapsulatus Dubinina and Zhdanov 1975 (Approved Lists 1980)]]; CCUG 12690; CFBP 2066; CIP 52.191; DSM 291; HAMBI 7; IAM 1236; ICPB 2963; IFO 14164; JCM 13063; JCM 20120; LMG 2257; LMG:2257; NBRC 14164; NCAIM B.01634; NCCB 68020; NCCB 72006; NCIB 9494; NCIB:9494; NCIMB 11286 [[Arthrobacter siderocapsulatus Dubinina and Zhdanov 1975 (Approved Lists 1980)]]; NCTC 10936; Pseudomonas arvilla C-1; Pseudomonas arvilla; "Pseudomonas convexa" Chester 1901; Pseudomonas convexa; "Pseudomonas eisenbergii" Migula 1900; Pseudomonas eisenbergii; "Pseudomonas incognita" Chester 1901; Pseudomonas incognita; "Pseudomonas ovalis" Chester 1901; Pseudomonas ovalis; Pseudomonas putida HK5; Pseudomonas putida; Pseudomonas putida (Trevisan 1889) Migula 1895; Pseudomonas rugosa; "Pseudomonas rugosa" (Wright 1895) Chester 1901; Pseudomonas sp. ACP_03; Pseudomonas sp. BW11M1; Pseudomonas sp. CT363; Pseudomonas sp. DRA525; Pseudomonas sp. ECT1/2016; Pseudomonas sp. ECT2/2016; Pseudomonas sp. ETC3/2016; Pseudomonas sp. FAR1/2016; Pseudomonas sp. GM4FR; Pseudomonas sp. KDB25; Pseudomonas sp. KDS 6; Pseudomonas sp. PSE3; Pseudomonas sp. PT1/2016; Pseudomonas sp. PX-A-Ps.sp2; Pseudomonas sp. TAU2/2016; Pseudomonas sp. TC29-1; Pseudomonas sp. UF1/2016; "Pseudomonas striata" Chester 1901; Pseudomonas striata; Pseudomanas putida;
TaxTree of Organism Pseudomonas putida
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EC NUMBER
COMMENTARY hide
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-suppplied EC number
preliminary BRENDA-supplied EC number
transferred, now EC 5.3.2.8
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(+)-camphor degradation
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(-)-camphor degradation
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(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
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(5R)-carbapenem carboxylate biosynthesis
(5Z)-dodecenoate biosynthesis I
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(5Z)-dodecenoate biosynthesis II
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(8E,10E)-dodeca-8,10-dienol biosynthesis
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(Kdo)2-lipid A biosynthesis I (E. coli)
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(Kdo)2-lipid A biosynthesis II (P. putida)
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(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
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(R)-cysteate degradation
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(R,R)-butanediol biosynthesis
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(R,R)-butanediol degradation
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(S)-lactate fermentation to propanoate, acetate and hydrogen
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(S)-propane-1,2-diol degradation
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(S)-reticuline biosynthesis I
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1,2,4,5-tetrachlorobenzene degradation
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1,2,4-trichlorobenzene degradation
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1,2-dichlorobenzene degradation
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1,2-dichloroethane degradation
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1,2-propanediol biosynthesis from lactate (engineered)
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1,3-dichlorobenzene degradation
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1,3-dimethylbenzene degradation to 3-methylbenzoate
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1,3-propanediol biosynthesis (engineered)
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1,4-dichlorobenzene degradation
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1,4-dimethylbenzene degradation to 4-methylbenzoate
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1,5-anhydrofructose degradation
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1-butanol autotrophic biosynthesis (engineered)
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10-cis-heptadecenoyl-CoA degradation (yeast)
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10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
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10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
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1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
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1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)
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2'-deoxymugineic acid phytosiderophore biosynthesis
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2,2'-dihydroxybiphenyl degradation
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2,3-dihydroxybenzoate biosynthesis
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2,3-dihydroxybenzoate degradation
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2,4,5-trichlorophenoxyacetate degradation
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2,4,6-trichlorophenol degradation
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2,4-dichlorophenoxyacetate degradation
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2,4-dichlorotoluene degradation
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2,4-dinitrotoluene degradation
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2,4-xylenol degradation to protocatechuate
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2,5-dichlorotoluene degradation
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2,5-xylenol and 3,5-xylenol degradation
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2-amino-3-carboxymuconate semialdehyde degradation to 2-hydroxypentadienoate
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2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA
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2-amino-3-hydroxycyclopent-2-enone biosynthesis
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2-aminoethylphosphonate degradation I
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2-aminophenol degradation
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2-arachidonoylglycerol biosynthesis
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2-carboxy-1,4-naphthoquinol biosynthesis
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2-chloroacrylate degradation I
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2-chlorobenzoate degradation
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2-deoxy-alpha-D-ribose 1-phosphate degradation
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2-deoxy-D-glucose 6-phosphate degradation
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2-deoxy-D-ribose degradation I
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2-deoxy-D-ribose degradation II
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2-hydroxybiphenyl degradation
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2-hydroxypenta-2,4-dienoate degradation
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2-methyl-branched fatty acid beta-oxidation
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2-methylcitrate cycle I
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2-methylcitrate cycle II
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2-methylpropene degradation
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2-nitrobenzoate degradation I
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2-nitrobenzoate degradation II
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2-nitrophenol degradation
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2-nitrotoluene degradation
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2-oxobutanoate degradation II
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2-oxoglutarate decarboxylation to succinyl-CoA
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2-oxoisovalerate decarboxylation to isobutanoyl-CoA
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3,4,6-trichlorocatechol degradation
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3,4-dichlorobenzoate degradation
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3,4-dichlorotoluene degradation
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3,5-dichlorocatechol degradation
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3,5-dimethoxytoluene biosynthesis
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3,6-anhydro-alpha-L-galactopyranose degradation
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3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
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3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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3-(4-hydroxyphenyl)pyruvate biosynthesis
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3-chlorobenzoate degradation II (via protocatechuate)
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3-chlorocatechol degradation
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3-chlorocatechol degradation I (ortho)
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3-chlorocatechol degradation II (ortho)
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3-chlorocatechol degradation III (meta pathway)
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3-chlorotoluene degradation I
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3-chlorotoluene degradation II
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3-dehydroquinate biosynthesis I
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3-dehydroquinate biosynthesis II (archaea)
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3-hydroxy-4-methyl-anthranilate biosynthesis I
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3-hydroxy-4-methyl-anthranilate biosynthesis II
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3-hydroxypropanoate cycle
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3-hydroxypropanoate/4-hydroxybutanate cycle
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3-methyl-branched fatty acid alpha-oxidation
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3-methylbutanol biosynthesis (engineered)
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3-methylquinoline degradation
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3-oxoadipate degradation
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3-phenylpropionate degradation
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4,5-dichlorocatechol degradation
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4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II
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4-amino-3-hydroxybenzoate degradation
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4-aminobutanoate degradation I
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4-aminobutanoate degradation II
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4-aminobutanoate degradation III
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4-aminobutanoate degradation V
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4-aminophenol degradation
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4-chloro-2-methylphenoxyacetate degradation
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4-chlorobenzoate degradation
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4-chlorocatechol degradation
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4-chloronitrobenzene degradation
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4-coumarate degradation (aerobic)
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4-coumarate degradation (anaerobic)
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4-deoxy-L-threo-hex-4-enopyranuronate degradation
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4-ethylphenol degradation (anaerobic)
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4-hydroxy-2(1H)-quinolone biosynthesis
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4-hydroxy-2-nonenal detoxification
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4-hydroxy-4-methyl-L-glutamate biosynthesis
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4-hydroxyacetophenone degradation
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4-hydroxybenzoate biosynthesis I (eukaryotes)
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4-hydroxybenzoate biosynthesis III (plants)
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4-hydroxymandelate degradation
4-hydroxyphenylacetate degradation
4-methylcatechol degradation (ortho cleavage)
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4-methylphenol degradation to protocatechuate
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4-nitrophenol degradation I
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4-nitrophenol degradation II
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4-nitrotoluene degradation II
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4-oxopentanoate degradation
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4-sulfocatechol degradation
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5-aminoimidazole ribonucleotide biosynthesis I
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5-aminoimidazole ribonucleotide biosynthesis II
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5-chloro-3-methyl-catechol degradation
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5-hydroxymethylfurfural degradation
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5-nitroanthranilate degradation
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5-oxo-L-proline metabolism
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6-gingerol analog biosynthesis (engineered)
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8-amino-7-oxononanoate biosynthesis I
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9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
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9-lipoxygenase and 9-allene oxide synthase pathway
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ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
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ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide
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abscisic acid biosynthesis
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Ac/N-end rule pathway
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Acarbose and validamycin biosynthesis
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acetaldehyde biosynthesis I
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acetaldehyde biosynthesis II
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acetate and ATP formation from acetyl-CoA I
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acetate conversion to acetyl-CoA
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acetate fermentation
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acetoacetate degradation (to acetyl CoA)
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acetoin degradation
acetone degradation I (to methylglyoxal)
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acetone degradation III (to propane-1,2-diol)
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acetyl CoA biosynthesis
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acetyl-CoA fermentation to butanoate II
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acetylene degradation (anaerobic)
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acridone alkaloid biosynthesis
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acrylonitrile degradation I
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acrylonitrile degradation II
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actinomycin D biosynthesis
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acyl carrier protein activation
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acyl carrier protein metabolism
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adamantanone degradation
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adenine and adenosine salvage I
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adenine and adenosine salvage III
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adenine and adenosine salvage V
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adenosine nucleotides degradation I
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adenosine nucleotides degradation II
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adenosine ribonucleotides de novo biosynthesis
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adipate degradation
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adlupulone and adhumulone biosynthesis
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aerobactin biosynthesis
aerobic respiration (NDH-1 to cytochrome c oxidase via plastocyanin)
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aerobic respiration I (cytochrome c)
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aerobic respiration II (cytochrome c) (yeast)
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aerobic respiration III (alternative oxidase pathway)
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aerobic respiration in cyanobacteria (NDH-2 to cytochrome c oxidase via plastocyanin)
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Aflatoxin biosynthesis
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alanine metabolism
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alanine racemization
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Alanine, aspartate and glutamate metabolism
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aldoxime degradation
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alginate degradation
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alkane biosynthesis I
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alkane biosynthesis II
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alkane oxidation
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allantoin degradation
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allantoin degradation to ureidoglycolate I (urea producing)
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allantoin degradation to ureidoglycolate II (ammonia producing)
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allopregnanolone biosynthesis
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alpha-Linolenic acid metabolism
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alpha-tomatine degradation
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Amaryllidacea alkaloids biosynthesis
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Amino sugar and nucleotide sugar metabolism
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Aminoacyl-tRNA biosynthesis
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Aminobenzoate degradation
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aminopropylcadaverine biosynthesis
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ammonia assimilation cycle I
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ammonia assimilation cycle II
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ammonia oxidation I (aerobic)
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ammonia oxidation II (anaerobic)
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ammonia oxidation III
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anaerobic aromatic compound degradation (Thauera aromatica)
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anaerobic energy metabolism (invertebrates, cytosol)
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anaerobic energy metabolism (invertebrates, mitochondrial)
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anandamide biosynthesis I
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anandamide biosynthesis II
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anandamide degradation
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anapleurotic synthesis of oxalacetate
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androgen and estrogen metabolism
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androgen biosynthesis
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androsrtendione degradation II (anaerobic)
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androstenedione degradation I (aerobic)
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anhydromuropeptides recycling I
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anhydromuropeptides recycling II
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ansatrienin biosynthesis
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anteiso-branched-chain fatty acid biosynthesis
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anthranilate degradation I (aerobic)
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arachidonate biosynthesis
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Arachidonic acid metabolism
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arachidonic acid metabolism
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Arg/N-end rule pathway (eukaryotic)
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Arginine and proline metabolism
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Arginine biosynthesis
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arginine dependent acid resistance
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arginine metabolism
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aromatic glucosinolate activation
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aromatic biogenic amine degradation (bacteria)
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arsenate detoxification I (mammalian)
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arsenate detoxification II (glutaredoxin)
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arsenate detoxification III (thioredoxin)
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arsenate detoxification IV (mycothiol)
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arsenate reduction (respiratory)
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arsenite oxidation I (respiratory)
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arsenite oxidation II (respiratory)
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arsonoacetate degradation
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Ascorbate and aldarate metabolism
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ascorbate metabolism
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ascorbate recycling (cytosolic)
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aspartate and asparagine metabolism
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aspirin triggered resolvin D biosynthesis
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aspirin triggered resolvin E biosynthesis
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assimilatory sulfate reduction III
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astaxanthin biosynthesis (bacteria, fungi, algae)
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ATP biosynthesis
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Atrazine degradation
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atrazine degradation I (aerobic)
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atromentin biosynthesis
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autoinducer AI-1 biosynthesis
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avenanthramide biosynthesis
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bacilysin biosynthesis
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backdoor pathway of androgen biosynthesis
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bacterial bioluminescence
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baicalein degradation (hydrogen peroxide detoxification)
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benzene degradation
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benzoate biosynthesis I (CoA-dependent, beta-oxidative)
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benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
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benzoate biosynthesis III (CoA-dependent, non-beta-oxidative)
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Benzoate degradation
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benzoate degradation I (aerobic)
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benzoate degradation II (aerobic and anaerobic)
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benzoyl-CoA degradation I (aerobic)
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beta-(1,4)-mannan degradation
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beta-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation
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beta-alanine biosynthesis I
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beta-alanine biosynthesis II
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beta-alanine biosynthesis IV
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beta-Alanine metabolism
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beta-D-glucuronide and D-glucuronate degradation
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Betalain biosynthesis
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betanidin degradation
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betaxanthin biosynthesis
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betaxanthin biosynthesis (via dopamine)
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Bifidobacterium shunt
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bile acid biosynthesis, neutral pathway
Biosynthesis of 12-, 14- and 16-membered macrolides
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Biosynthesis of secondary metabolites
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Biosynthesis of siderophore group nonribosomal peptides
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Biosynthesis of unsaturated fatty acids
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Biosynthesis of vancomycin group antibiotics
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Biosynthesis of various secondary metabolites - part 1
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Biosynthesis of various secondary metabolites - part 2
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Biosynthesis of various secondary metabolites - part 3
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Biotin metabolism
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biphenyl degradation
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bisphenol A degradation
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Bisphenol degradation
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bisucaberin biosynthesis
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brassinosteroid biosynthesis I
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brassinosteroid biosynthesis II
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bryostatin biosynthesis
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bupropion degradation
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butachlor degradation
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butanoate fermentation
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Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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C4 photosynthetic carbon assimilation cycle, NADP-ME type
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C4 photosynthetic carbon assimilation cycle, PEPCK type
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C5-Branched dibasic acid metabolism
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cadaverine biosynthesis
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caffeine biosynthesis I
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caffeine biosynthesis II (via paraxanthine)
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caffeine degradation III (bacteria, via demethylation)
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Caffeine metabolism
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Calvin-Benson-Bassham cycle
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camalexin biosynthesis
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camphor degradation
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canavanine biosynthesis
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Caprolactam degradation
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capsaicin biosynthesis
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capsiconiate biosynthesis
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Carbapenem biosynthesis
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carbaryl degradation
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carbazole degradation
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Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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cardiolipin biosynthesis
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carnitine metabolism
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Carotenoid biosynthesis
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carotenoid biosynthesis
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catechol degradation to 2-hydroxypentadienoate I
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catechol degradation to 2-hydroxypentadienoate II
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catechol degradation to beta-ketoadipate
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catecholamine biosynthesis
CDP-6-deoxy-D-gulose biosynthesis
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cellulose biosynthesis
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cellulose degradation
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cellulose degradation II (fungi)
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ceramide and sphingolipid recycling and degradation (yeast)
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ceramide biosynthesis
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ceramide degradation by alpha-oxidation
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chitin biosynthesis
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chitin deacetylation
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chitin degradation I (archaea)
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chitin degradation II (Vibrio)
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chitin degradation III (Serratia)
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chlorinated phenols degradation
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Chloroalkane and chloroalkene degradation
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chlorobenzene degradation
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Chlorocyclohexane and chlorobenzene degradation
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chlorosalicylate degradation
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chlorpyrifos degradation
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cholesterol degradation to androstenedione I (cholesterol oxidase)
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cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
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cholesterol degradation to androstenedione III (anaerobic)
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choline degradation I
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choline degradation IV
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choline-O-sulfate degradation
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chorismate biosynthesis from 3-dehydroquinate
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chorismate metabolism
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cinnamoyl-CoA biosynthesis
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cis-geranyl-CoA degradation
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cis-vaccenate biosynthesis
Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation in Crenarchaeota
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CO2 fixation into oxaloacetate (anaplerotic)
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coenzyme A biosynthesis I (prokaryotic)
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coenzyme A metabolism
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coenzyme B biosynthesis
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coenzyme M biosynthesis
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coenzyme M biosynthesis II
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colupulone and cohumulone biosynthesis
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coumarin biosynthesis (via 2-coumarate)
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coumarins biosynthesis (engineered)
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creatine-phosphate biosynthesis
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creatinine degradation
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creatinine degradation I
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creatinine degradation II
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crotonate fermentation (to acetate and cyclohexane carboxylate)
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crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
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cutin biosynthesis
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cyanate degradation
Cyanoamino acid metabolism
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cyanophycin metabolism
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cyclohexanol degradation
cyclooctatin biosynthesis
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cyclopropane fatty acid (CFA) biosynthesis
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Cysteine and methionine metabolism
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cysteine metabolism
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cytosolic NADPH production (yeast)
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D-Alanine metabolism
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D-arabinose degradation III
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D-arabitol degradation
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D-Arginine and D-ornithine metabolism
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D-carnitine degradation II
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D-fructuronate degradation
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D-galactarate degradation I
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D-galactarate degradation II
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D-galactose degradation I (Leloir pathway)
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D-galactose detoxification
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D-galacturonate degradation I
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D-galacturonate degradation II
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D-glucarate degradation I
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D-glucarate degradation II
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D-gluconate degradation
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D-glucosaminate degradation
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D-glucuronate degradation II
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D-Glutamine and D-glutamate metabolism
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D-lactate to cytochrome bo oxidase electron transfer
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D-malate degradation
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-
d-mannose degradation
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D-mannose degradation I
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D-mannose degradation II
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D-phenylglycine degradation
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D-sorbitol biosynthesis I
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D-sorbitol degradation I
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d-xylose degradation
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D-xylose degradation I
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D-xylose degradation III
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D-xylose degradation IV
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D-xylose degradation to ethylene glycol (engineered)
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D-xylose degradation V
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degradation of aromatic, nitrogen containing compounds
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degradation of hexoses
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degradation of pentoses
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degradation of sugar acids
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degradation of sugar alcohols
-
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denitrification
-
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desferrioxamine B biosynthesis
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desferrioxamine E biosynthesis
-
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detoxification of reactive carbonyls in chloroplasts
-
-
di-myo-inositol phosphate biosynthesis
-
-
dibenzofuran degradation
-
-
dibenzothiophene desulfurization
-
-
diethylphosphate degradation
-
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dimethyl sulfide biosynthesis from methionine
-
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dimethyl sulfide degradation II (oxidation)
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dimethylsulfoniopropanoate biosynthesis I (Wollastonia)
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dimethylsulfoniopropanoate biosynthesis II (Spartina)
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Dioxin degradation
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diphenyl ethers degradation
-
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dipicolinate biosynthesis
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dissimilatory sulfate reduction I (to hydrogen sufide))
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divinyl ether biosynthesis II
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docosahexaenoate biosynthesis III (6-desaturase, mammals)
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dopamine degradation
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drosopterin and aurodrosopterin biosynthesis
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Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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dTDP-3-acetamido-3,6-dideoxy-alpha-D-glucose biosynthesis
-
-
dTDP-3-acetamido-alpha-D-fucose biosynthesis
-
-
dTDP-4-O-demethyl-beta-L-noviose biosynthesis
-
-
dTDP-6-deoxy-alpha-D-allose biosynthesis
-
-
dTDP-alpha-D-forosamine biosynthesis
-
-
dTDP-alpha-D-mycaminose biosynthesis
-
-
dTDP-alpha-D-olivose, dTDP-alpha-D-oliose and dTDP-alpha-D-mycarose biosynthesis
-
-
dTDP-alpha-D-ravidosamine and dTDP-4-acetyl-alpha-D-ravidosamine biosynthesis
-
-
dTDP-beta-D-fucofuranose biosynthesis
-
-
dTDP-beta-L-4-epi-vancosamine biosynthesis
-
-
dTDP-beta-L-digitoxose biosynthesis
-
-
dTDP-beta-L-megosamine biosynthesis
-
-
dTDP-beta-L-mycarose biosynthesis
-
-
dTDP-beta-L-olivose biosynthesis
-
-
dTDP-beta-L-rhamnose biosynthesis
-
-
dTDP-D-desosamine biosynthesis
-
-
dTDP-L-daunosamine biosynthesis
-
-
dTDP-N-acetylthomosamine biosynthesis
-
-
dTDP-N-acetylviosamine biosynthesis
-
-
dTDPLrhamnose biosynthesis
-
-
dTMP de novo biosynthesis (mitochondrial)
-
-
echinatin biosynthesis
-
-
ectoine biosynthesis
-
-
enterobactin biosynthesis
Entner Doudoroff pathway
-
-
Entner-Doudoroff pathway I
-
-
Entner-Doudoroff pathway II (non-phosphorylative)
-
-
Entner-Doudoroff pathway III (semi-phosphorylative)
-
-
Entner-Doudoroff shunt
-
-
ephedrine biosynthesis
-
-
ergothioneine biosynthesis I (bacteria)
-
-
erythro-tetrahydrobiopterin biosynthesis I
-
-
erythromycin D biosynthesis
-
-
ethanol degradation I
-
-
ethanol degradation II
-
-
ethanol degradation III
-
-
ethanol degradation IV
-
-
ethanol fermentation
-
-
ethanolamine utilization
-
-
ethene and chloroethene degradation
-
-
ethene biosynthesis I (plants)
-
-
ethene biosynthesis II (microbes)
-
-
ethene biosynthesis III (microbes)
-
-
ethene biosynthesis IV (engineered)
-
-
ethene biosynthesis V (engineered)
-
-
Ether lipid metabolism
-
-
Ethylbenzene degradation
-
-
ethylmalonyl-CoA pathway
-
-
even iso-branched-chain fatty acid biosynthesis
-
-
fatty acid alpha-oxidation I (plants)
-
-
fatty acid beta-oxidation I (generic)
-
-
fatty acid beta-oxidation II (plant peroxisome)
-
-
fatty acid beta-oxidation IV (unsaturated, even number)
-
-
fatty acid beta-oxidation VI (mammalian peroxisome)
-
-
fatty acid beta-oxidation VII (yeast peroxisome)
-
-
Fatty acid biosynthesis
-
-
fatty acid biosynthesis initiation (mitochondria)
-
-
fatty acid biosynthesis initiation (plant mitochondria)
-
-
fatty acid biosynthesis initiation (type I)
-
-
fatty acid biosynthesis initiation (type II)
-
-
Fatty acid degradation
-
-
Fatty acid elongation
-
-
fatty acid elongation -- saturated
-
-
fatty acid salvage
-
-
Fe(II) oxidation
-
-
FeMo cofactor biosynthesis
-
-
ferrichrome A biosynthesis
-
-
firefly bioluminescence
-
-
flavin biosynthesis
-
-
flavin biosynthesis I (bacteria and plants)
-
-
flavin biosynthesis II (archaea)
-
-
flavin biosynthesis III (fungi)
-
-
Flavone and flavonol biosynthesis
-
-
flavonoid biosynthesis
-
-
Flavonoid biosynthesis
-
-
flavonoid biosynthesis (in equisetum)
-
-
flavonoid di-C-glucosylation
-
-
flexixanthin biosynthesis
-
-
fluoroacetate and fluorothreonine biosynthesis
-
-
fluoroacetate degradation
-
-
Fluorobenzoate degradation
-
-
Folate biosynthesis
-
-
folate polyglutamylation
folate transformations I
-
-
folate transformations II (plants)
-
-
folate transformations III (E. coli)
-
-
formaldehyde assimilation I (serine pathway)
-
-
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
formaldehyde oxidation
-
-
formaldehyde oxidation I
-
-
formaldehyde oxidation II (glutathione-dependent)
-
-
formaldehyde oxidation IV (thiol-independent)
-
-
formaldehyde oxidation VII (THF pathway)
-
-
formate assimilation into 5,10-methylenetetrahydrofolate
-
-
formate oxidation to CO2
-
-
formate to nitrite electron transfer
-
-
fructan degradation
-
-
Fructose and mannose metabolism
-
-
fructose degradation
-
-
furfural degradation
-
-
Furfural degradation
-
-
GABA shunt
-
-
Galactose metabolism
-
-
gallate biosynthesis
-
-
gallate degradation
-
-
gallate degradation I
-
-
gallate degradation II
-
-
gallate degradation III (anaerobic)
-
-
gamma-glutamyl cycle
-
-
gamma-hexachlorocyclohexane degradation
-
-
gamma-linolenate biosynthesis II (animals)
-
-
gamma-resorcylate degradation I
-
-
gamma-resorcylate degradation II
-
-
GDP-alpha-D-glucose biosynthesis
-
-
GDP-mannose biosynthesis
-
-
gentisate degradation I
-
-
gentisate degradation II
-
-
geraniol and geranial biosynthesis
-
-
Geraniol degradation
-
-
ginsenoside metabolism
-
-
ginsenosides biosynthesis
-
-
gliotoxin biosynthesis
-
-
glucocorticoid biosynthesis
-
-
gluconeogenesis
-
-
gluconeogenesis I
-
-
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
gluconeogenesis III
-
-
glucose and glucose-1-phosphate degradation
-
-
glucose degradation (oxidative)
-
-
glucosinolate activation
-
-
Glucosinolate biosynthesis
-
-
glucosinolate biosynthesis from dihomomethionine
-
-
glucosinolate biosynthesis from hexahomomethionine
-
-
glucosinolate biosynthesis from homomethionine
-
-
glucosinolate biosynthesis from pentahomomethionine
-
-
glucosinolate biosynthesis from phenylalanine
-
-
glucosinolate biosynthesis from tetrahomomethionine
-
-
glucosinolate biosynthesis from trihomomethionine
-
-
glucosinolate biosynthesis from tryptophan
-
-
glucosinolate biosynthesis from tyrosine
-
-
glucosylglycerol biosynthesis
-
-
glutamate and glutamine metabolism
-
-
glutaminyl-tRNAgln biosynthesis via transamidation
-
-
glutarate degradation
-
-
glutaryl-CoA degradation
-
-
glutathione biosynthesis
-
-
Glutathione metabolism
-
-
glutathione metabolism
-
-
glutathione-mediated detoxification I
-
-
glutathione-mediated detoxification II
-
-
glutathione-peroxide redox reactions
-
-
glycerol degradation II
-
-
glycerol degradation III
-
-
glycerol degradation to butanol
-
-
glycerol degradation V
-
-
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
-
-
Glycerolipid metabolism
-
-
Glycerophospholipid metabolism
-
-
glycine betaine biosynthesis
-
-
glycine betaine biosynthesis I (Gram-negative bacteria)
-
-
glycine betaine biosynthesis II (Gram-positive bacteria)
-
-
glycine betaine biosynthesis III (plants)
-
-
glycine betaine degradation I
-
-
glycine betaine degradation II (mammalian)
-
-
glycine biosynthesis I
-
-
glycine biosynthesis II
-
-
glycine biosynthesis IV
-
-
glycine cleavage
-
-
glycine degradation (reductive Stickland reaction)
-
-
glycine metabolism
-
-
Glycine, serine and threonine metabolism
-
-
glycogen biosynthesis
-
-
glycogen biosynthesis I (from ADP-D-Glucose)
-
-
glycogen biosynthesis II (from UDP-D-Glucose)
-
-
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
glycogen degradation I
-
-
glycogen degradation II
-
-
glycogen metabolism
-
-
glycolate and glyoxylate degradation
-
-
glycolate and glyoxylate degradation I
-
-
glycolate and glyoxylate degradation II
-
-
glycolysis
-
-
Glycolysis / Gluconeogenesis
-
-
glycolysis I (from glucose 6-phosphate)
-
-
glycolysis II (from fructose 6-phosphate)
-
-
glycolysis III (from glucose)
-
-
glycolysis IV
-
-
glycolysis V (Pyrococcus)
-
-
Glycosaminoglycan degradation
-
-
Glycosphingolipid biosynthesis - ganglio series
-
-
Glycosphingolipid biosynthesis - globo and isoglobo series
-
-
Glycosphingolipid biosynthesis - lacto and neolacto series
-
-
Glyoxylate and dicarboxylate metabolism
-
-
glyoxylate assimilation
-
-
glyoxylate cycle
-
-
glyphosate degradation II
-
-
gondoate biosynthesis (anaerobic)
-
-
gossypol biosynthesis
-
-
grixazone biosynthesis
-
-
guaiacol biosynthesis
-
-
guanine and guanosine salvage
-
-
guanosine nucleotides degradation I
-
-
guanosine nucleotides degradation II
-
-
guanosine nucleotides degradation III
-
-
guanosine ribonucleotides de novo biosynthesis
-
-
heme b biosynthesis I (aerobic)
-
-
heme b biosynthesis II (oxygen-independent)
-
-
heme b biosynthesis IV (Gram-positive bacteria)
-
-
heme b biosynthesis V (aerobic)
-
-
heme degradation I
-
-
heme degradation II
-
-
heme degradation III
-
-
heme metabolism
-
-
heptadecane biosynthesis
-
-
heterolactic fermentation
-
-
histamine biosynthesis
-
-
histamine degradation
-
-
Histidine metabolism
-
-
histidine metabolism
-
-
homocysteine and cysteine interconversion
-
-
homoglutathione biosynthesis
-
-
hydrogen sulfide biosynthesis II (mammalian)
-
-
hypotaurine degradation
-
-
IAA biosynthesis
-
-
icosapentaenoate biosynthesis II (6-desaturase, mammals)
-
-
icosapentaenoate biosynthesis III (8-desaturase, mammals)
-
-
incomplete reductive TCA cycle
-
-
indole glucosinolate activation (herbivore attack)
-
-
indole glucosinolate activation (intact plant cell)
-
-
indole-3-acetate biosynthesis II
-
-
indole-3-acetate biosynthesis III (bacteria)
-
-
indole-3-acetate biosynthesis IV (bacteria)
-
-
indole-3-acetate biosynthesis V (bacteria and fungi)
-
-
indole-3-acetate biosynthesis VI (bacteria)
-
-
indole-3-acetate degradation I
-
-
indole-3-acetate degradation II
-
-
inosine 5'-phosphate degradation
-
-
inosine-5'-phosphate biosynthesis I
-
-
inosine-5'-phosphate biosynthesis II
-
-
inosine-5'-phosphate biosynthesis III
-
-
Inositol phosphate metabolism
-
-
Insect hormone biosynthesis
-
-
isoflavonoid biosynthesis I
-
-
isoleucine metabolism
-
-
isoprene biosynthesis II (engineered)
-
-
isoprene degradation
-
-
isoprenoid biosynthesis
-
-
isopropanol biosynthesis (engineered)
-
-
Isoquinoline alkaloid biosynthesis
-
-
itaconate biosynthesis II
-
-
itaconate degradation
-
-
jadomycin biosynthesis
-
-
jasmonic acid biosynthesis
-
-
juglone degradation
-
-
justicidin B biosynthesis
-
-
ketogenesis
-
-
ketogluconate metabolism
ketolysis
-
-
L-alanine biosynthesis I
-
-
L-alanine biosynthesis II
-
-
L-alanine degradation I
-
-
L-alanine degradation II (to D-lactate)
-
-
L-alanine degradation III
-
-
L-alanine degradation IV
-
-
L-alanine degradation V (oxidative Stickland reaction)
-
-
L-alanine degradation VI (reductive Stickland reaction)
-
-
L-arabinose degradation III
-
-
L-arabinose degradation IV
-
-
L-arginine biosynthesis I (via L-ornithine)
-
-
L-arginine biosynthesis II (acetyl cycle)
-
-
L-arginine biosynthesis III (via N-acetyl-L-citrulline)
-
-
L-arginine biosynthesis IV (archaea)
-
-
L-arginine degradation I (arginase pathway)
-
-
L-arginine degradation II (AST pathway)
-
-
L-arginine degradation III (arginine decarboxylase/agmatinase pathway)
-
-
L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)
-
-
L-arginine degradation IX (arginine:pyruvate transaminase pathway)
-
-
L-arginine degradation V (arginine deiminase pathway)
-
-
L-arginine degradation VI (arginase 2 pathway)
-
-
L-arginine degradation VII (arginase 3 pathway)
-
-
L-arginine degradation VIII (arginine oxidase pathway)
-
-
L-arginine degradation X (arginine monooxygenase pathway)
-
-
L-arginine degradation XI
-
-
L-arginine degradation XII
-
-
L-arginine degradation XIII (reductive Stickland reaction)
-
-
L-arginine degradation XIV (oxidative Stickland reaction)
-
-
L-ascorbate biosynthesis IV (animals, D-glucuronate pathway)
-
-
L-ascorbate biosynthesis VI (plants, myo-inositol pathway)
-
-
L-ascorbate biosynthesis VIII (engineered pathway)
-
-
L-ascorbate degradation II (bacterial, aerobic)
-
-
L-ascorbate degradation III
-
-
L-asparagine biosynthesis I
-
-
L-asparagine biosynthesis III (tRNA-dependent)
-
-
L-asparagine degradation I
-
-
L-asparagine degradation III (mammalian)
-
-
L-aspartate biosynthesis
-
-
L-aspartate degradation I
-
-
L-carnitine degradation II
-
-
L-carnitine degradation III
-
-
L-citrulline biosynthesis
-
-
L-citrulline degradation
-
-
L-cysteine biosynthesis I
-
-
L-cysteine biosynthesis III (from L-homocysteine)
-
-
L-cysteine biosynthesis VI (from L-methionine)
-
-
L-dopa and L-dopachrome biosynthesis
-
-
L-dopa degradation I (mammalian)
-
-
L-dopa degradation II (bacterial)
-
-
L-glutamate biosynthesis I
-
-
L-glutamate degradation I
-
-
L-glutamate degradation II
-
-
L-glutamate degradation IV
-
-
L-glutamate degradation IX (via 4-aminobutanoate)
-
-
L-glutamate degradation V (via hydroxyglutarate)
-
-
L-glutamate degradation VII (to butanoate)
-
-
L-glutamate degradation XI (reductive Stickland reaction)
-
-
L-glutamine biosynthesis I
-
-
L-glutamine biosynthesis III
-
-
L-glutamine degradation I
-
-
L-glutamine degradation II
-
-
L-histidine degradation I
-
-
L-histidine degradation II
-
-
L-histidine degradation III
-
-
L-histidine degradation V
-
-
L-histidine degradation VI
-
-
L-homoserine biosynthesis
-
-
L-idonate degradation
-
-
L-isoleucine biosynthesis I (from threonine)
-
-
L-isoleucine biosynthesis II
-
-
L-isoleucine biosynthesis III
-
-
L-isoleucine biosynthesis IV
-
-
L-isoleucine biosynthesis V
-
-
L-isoleucine degradation I
-
-
L-isoleucine degradation II
-
-
L-isoleucine degradation III (oxidative Stickland reaction)
-
-
L-lactaldehyde degradation
-
-
L-leucine biosynthesis
-
-
L-leucine degradation I
-
-
L-leucine degradation III
-
-
L-leucine degradation IV (reductive Stickland reaction)
-
-
L-leucine degradation V (oxidative Stickland reaction)
-
-
L-lysine biosynthesis I
-
-
L-lysine biosynthesis II
-
-
L-lysine biosynthesis III
-
-
L-lysine biosynthesis IV
-
-
L-lysine biosynthesis V
-
-
L-lysine biosynthesis VI
-
-
L-lysine degradation I
-
-
L-lysine degradation II (L-pipecolate pathway)
-
-
L-lysine degradation III
-
-
L-lysine degradation IV
-
-
L-lysine degradation V
-
-
L-lysine degradation VII
-
-
L-lysine degradation X
-
-
L-lysine degradation XI (mammalian)
-
-
L-lysine fermentation to acetate and butanoate
-
-
L-lyxonate degradation
-
-
L-malate degradation II
-
-
L-methionine biosynthesis I
-
-
L-methionine biosynthesis II
-
-
L-methionine biosynthesis III
-
-
L-methionine biosynthesis IV
-
-
L-methionine degradation I (to L-homocysteine)
-
-
L-methionine degradation III
-
-
L-methionine salvage from L-homocysteine
-
-
L-Ndelta-acetylornithine biosynthesis
-
-
L-nicotianamine biosynthesis
-
-
L-ornithine biosynthesis I
-
-
L-ornithine biosynthesis II
-
-
L-ornithine degradation I (L-proline biosynthesis)
-
-
L-phenylalanine biosynthesis I
-
-
L-phenylalanine biosynthesis II
-
-
L-phenylalanine biosynthesis III (cytosolic, plants)
-
-
L-phenylalanine degradation I (aerobic)
-
-
L-phenylalanine degradation II (anaerobic)
-
-
L-phenylalanine degradation III
-
-
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
L-phenylalanine degradation V
-
-
L-phenylalanine degradation VI (reductive Stickland reaction)
-
-
L-proline biosynthesis I (from L-glutamate)
-
-
L-proline biosynthesis II (from arginine)
-
-
L-proline biosynthesis III (from L-ornithine)
-
-
L-proline biosynthesis IV
-
-
L-proline degradation I
-
-
L-proline degradation II (reductive Stickland reaction)
-
-
L-serine biosynthesis I
-
-
L-serine biosynthesis II
-
-
L-threonine degradation I
-
-
L-threonine degradation III (to methylglyoxal)
-
-
L-threonine degradation IV
-
-
L-threonine degradation V
-
-
L-tryptophan biosynthesis
-
-
L-tryptophan degradation I (via anthranilate)
-
-
L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
-
-
L-tryptophan degradation V (side chain pathway)
-
-
L-tryptophan degradation VI (via tryptamine)
-
-
L-tryptophan degradation VIII (to tryptophol)
-
-
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
L-tryptophan degradation XI (mammalian, via kynurenine)
-
-
L-tyrosine biosynthesis I
-
-
L-tyrosine biosynthesis II
-
-
L-tyrosine biosynthesis III
-
-
L-tyrosine biosynthesis IV
-
-
L-tyrosine degradation I
-
-
L-tyrosine degradation II
-
-
L-tyrosine degradation III
-
-
L-tyrosine degradation IV (to 4-methylphenol)
-
-
L-tyrosine degradation V (reductive Stickland reaction)
-
-
L-valine biosynthesis
-
-
L-valine degradation I
-
-
L-valine degradation II
-
-
L-valine degradation III (oxidative Stickland reaction)
-
-
lactate fermentation
-
-
lactose degradation II
-
-
leucine metabolism
-
-
Limonene and pinene degradation
-
-
limonene degradation IV (anaerobic)
-
-
linamarin degradation
-
-
linoleate biosynthesis II (animals)
-
-
Linoleic acid metabolism
-
-
linustatin bioactivation
-
-
lipid A biosynthesis
-
-
lipid metabolism
-
-
lipoate biosynthesis
-
-
Lipopolysaccharide biosynthesis
-
-
lipoprotein posttranslational modification
-
-
long chain fatty acid ester synthesis (engineered)
-
-
long-chain fatty acid activation
-
-
lotaustralin degradation
-
-
lupanine biosynthesis
-
-
lupulone and humulone biosynthesis
-
-
luteolin triglucuronide degradation
-
-
Lysine biosynthesis
-
-
Lysine degradation
-
-
lysine metabolism
-
-
m-cresol degradation
-
-
malate/L-aspartate shuttle pathway
-
-
malonate degradation I (biotin-independent)
-
-
malonate degradation II (biotin-dependent)
-
-
mandelate degradation I
-
-
manganese oxidation I
-
-
mannitol biosynthesis
-
-
mannitol cycle
-
-
mannitol degradation II
-
-
matairesinol biosynthesis
-
-
melatonin degradation I
-
-
melatonin degradation II
-
-
menthol biosynthesis
-
-
Metabolic pathways
-
-
metabolism of disaccharids
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methane metabolism
-
-
methane oxidation to methanol I
-
-
Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
methanogenesis from acetate
-
-
methanol oxidation to carbon dioxide
-
-
methanol oxidation to formaldehyde II
-
-
methanol oxidation to formaldehyde IV
-
-
methionine metabolism
-
-
methyl indole-3-acetate interconversion
-
-
methyl ketone biosynthesis (engineered)
-
-
methyl parathion degradation
-
-
methyl tert-butyl ether degradation
-
-
methylamine degradation I
-
-
methylaspartate cycle
methylgallate degradation
-
-
methylglyoxal degradation
-
-
methylglyoxal degradation I
-
-
methylglyoxal degradation V
-
-
methylglyoxal degradation VI
-
-
methylglyoxal degradation VII
-
-
methylglyoxal degradation VIII
-
-
methylsalicylate degradation
-
-
mevalonate metabolism
-
-
mevalonate pathway I (eukaryotes and bacteria)
-
-
mevalonate pathway II (haloarchaea)
-
-
mevalonate pathway III (Thermoplasma)
-
-
mevalonate pathway IV (archaea)
-
-
Microbial metabolism in diverse environments
-
-
mineralocorticoid biosynthesis
-
-
mitochondrial NADPH production (yeast)
-
-
mixed acid fermentation
-
-
molybdenum cofactor biosynthesis
-
-
Monobactam biosynthesis
-
-
Monoterpenoid biosynthesis
-
-
morphine biosynthesis
-
-
mucin core 3 and core 4 O-glycosylation
-
-
Mucin type O-glycan biosynthesis
-
-
mupirocin biosynthesis
-
-
mycolate biosynthesis
-
-
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
-
-
mycothiol biosynthesis
-
-
myo-inositol biosynthesis
N-hydroxy-L-pipecolate biosynthesis
-
-
N-methyl-Delta1-pyrrolinium cation biosynthesis
-
-
NAD de novo biosynthesis I (from aspartate)
-
-
NAD metabolism
-
-
NAD(P)/NADPH interconversion
-
-
NADH to cytochrome bd oxidase electron transfer I
-
-
NADH to cytochrome bo oxidase electron transfer I
-
-
NADH to cytochrome bo oxidase electron transfer II
-
-
Naphthalene degradation
-
-
naphthalene degradation (aerobic)
-
-
naringenin biosynthesis (engineered)
-
-
neolinustatin bioactivation
-
-
Neomycin, kanamycin and gentamicin biosynthesis
-
-
neopentalenoketolactone and pentalenate biosynthesis
-
-
nepetalactone biosynthesis
-
-
Nicotinate and nicotinamide metabolism
-
-
nicotinate degradation I
-
-
nicotinate degradation II
-
-
nicotinate degradation III
-
-
nicotine biosynthesis
-
-
nicotine degradation I (pyridine pathway)
-
-
nicotine degradation II (pyrrolidine pathway)
-
-
nicotine degradation III (VPP pathway)
-
-
nicotine degradation IV
-
-
nicotine degradation V
-
-
nitrate assimilation
-
-
nitrate reduction I (denitrification)
-
-
nitrate reduction II (assimilatory)
-
-
nitrate reduction IV (dissimilatory)
-
-
nitrate reduction V (assimilatory)
-
-
nitrate reduction VI (assimilatory)
-
-
nitrate reduction VII (denitrification)
-
-
nitrate reduction X (dissimilatory, periplasmic)
-
-
nitric oxide biosynthesis II (mammals)
-
-
nitrifier denitrification
-
-
nitrite-dependent anaerobic methane oxidation
-
-
nitrobenzene degradation I
-
-
nitrogen fixation I (ferredoxin)
-
-
Nitrogen metabolism
-
-
Nitrotoluene degradation
-
-
nocardicin A biosynthesis
-
-
non-pathway related
-
-
noradrenaline and adrenaline degradation
-
-
norspermidine biosynthesis
-
-
Novobiocin biosynthesis
-
-
nucleoside and nucleotide degradation (archaea)
-
-
nylon-6 oligomer degradation
-
-
O-antigen building blocks biosynthesis (E. coli)
-
-
O-Antigen nucleotide sugar biosynthesis
-
-
o-diquinones biosynthesis
-
-
octane oxidation
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
-
-
odd iso-branched-chain fatty acid biosynthesis
-
-
oleandomycin activation/inactivation
-
-
oleate beta-oxidation
-
-
oleate biosynthesis I (plants)
-
-
oleate biosynthesis II (animals and fungi)
-
-
oleate biosynthesis IV (anaerobic)
-
-
One carbon pool by folate
-
-
ophthalmate biosynthesis
-
-
orcinol degradation
-
-
ornithine metabolism
-
-
orthanilate degradation
-
-
Other glycan degradation
-
-
oxalate degradation III
-
-
oxalate degradation VI
-
-
oxidative decarboxylation of pyruvate
-
-
Oxidative phosphorylation
-
-
oxidative phosphorylation
-
-
p-cumate degradation to 2-hydroxypentadienoate
-
-
p-cymene degradation to p-cumate
-
-
palmitate biosynthesis
-
-
palmitate biosynthesis (type II fatty acid synthase)
-
-
palmitoleate biosynthesis
-
-
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
-
-
Pantothenate and CoA biosynthesis
-
-
pantothenate biosynthesis
-
-
paraoxon degradation
-
-
parathion degradation
-
-
partial TCA cycle (obligate autotrophs)
-
-
pectin degradation II
-
-
pederin biosynthesis
-
-
Penicillin and cephalosporin biosynthesis
-
-
penicillin G and penicillin V biosynthesis
-
-
penicillin K biosynthesis
-
-
pentachlorophenol degradation
-
-
Pentose and glucuronate interconversions
-
-
Pentose phosphate pathway
-
-
pentose phosphate pathway
-
-
pentose phosphate pathway (non-oxidative branch) II
-
-
pentose phosphate pathway (oxidative branch) I
-
-
Peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis I (meso-diaminopimelate containing)
-
-
peptidoglycan biosynthesis II (staphylococci)
-
-
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
peptidoglycan biosynthesis V (beta-lactam resistance)
-
-
peptidoglycan maturation (meso-diaminopimelate containing)
-
-
petrobactin biosynthesis
-
-
petroselinate biosynthesis
-
-
Phenazine biosynthesis
-
-
phenol degradation
-
-
phenol degradation I (aerobic)
-
-
phenylacetate degradation (aerobic)
-
-
phenylacetate degradation I (aerobic)
-
-
phenylacetate degradation II (anaerobic)
-
-
Phenylalanine metabolism
-
-
phenylalanine metabolism
-
-
Phenylalanine, tyrosine and tryptophan biosynthesis
-
-
phenylethanol biosynthesis
-
-
phenylethanol degradation
-
-
phenylethylamine degradation I
-
-
phenylethylamine degradation II
-
-
phenylmercury acetate degradation
phenylpropanoid biosynthesis
-
-
Phenylpropanoid biosynthesis
-
-
phenylpropanoid biosynthesis
-
-
phenylpropanoid biosynthesis, initial reactions
-
-
pheomelanin biosynthesis
-
-
phosphate acquisition
-
-
phosphatidate metabolism, as a signaling molecule
-
-
phosphatidylcholine acyl editing
-
-
phosphatidylcholine biosynthesis VI
-
-
phosphatidylethanolamine bioynthesis
-
-
phosphatidylinositol biosynthesis I (bacteria)
-
-
phospholipases
-
-
phospholipid remodeling (phosphatidate, yeast)
-
-
phospholipid remodeling (phosphatidylcholine, yeast)
-
-
phospholipid remodeling (phosphatidylethanolamine, yeast)
-
-
Phosphonate and phosphinate metabolism
-
-
phosphonoacetate degradation
-
-
phosphopantothenate biosynthesis I
-
-
phosphopantothenate biosynthesis II
-
-
phosphopantothenate biosynthesis III (archaea)
-
-
photorespiration
-
-
Photosynthesis
-
-
photosynthesis
-
-
photosynthesis light reactions
-
-
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
-
-
phycocyanobilin biosynthesis
-
-
phycoerythrobilin biosynthesis I
-
-
phycoerythrobilin biosynthesis II
-
-
phycourobilin biosynthesis
-
-
phycoviolobilin biosynthesis
-
-
phytate degradation I
-
-
phytochromobilin biosynthesis
-
-
phytol degradation
-
-
picolinate degradation
-
-
pinobanksin biosynthesis
-
-
pinoresinol degradation
-
-
plasmalogen biosynthesis
-
-
plasmalogen degradation
-
-
plastoquinol-9 biosynthesis I
-
-
plastoquinol-9 biosynthesis II
-
-
platensimycin biosynthesis
-
-
poly-hydroxy fatty acids biosynthesis
-
-
polyamine pathway
-
-
polybrominated dihydroxylated diphenyl ethers biosynthesis
-
-
Polycyclic aromatic hydrocarbon degradation
-
-
polyhydroxybutanoate biosynthesis
-
-
polyhydroxydecanoate biosynthesis
-
-
Polyketide sugar unit biosynthesis
-
-
polyphosphate metabolism
-
-
Porphyrin and chlorophyll metabolism
-
-
Primary bile acid biosynthesis
-
-
procollagen hydroxylation and glycosylation
-
-
progesterone biosynthesis
-
-
proline metabolism
-
-
proline to cytochrome bo oxidase electron transfer
-
-
propanoate fermentation to 2-methylbutanoate
-
-
Propanoate metabolism
-
-
propanol degradation
-
-
propene degradation
-
-
propionate fermentation
-
-
protective electron sinks in the thylakoid membrane (PSII to PTOX)
-
-
protein S-nitrosylation and denitrosylation
-
-
protocatechuate degradation I (meta-cleavage pathway)
-
-
protocatechuate degradation II (ortho-cleavage pathway)
-
-
protocatechuate degradation III (para-cleavage pathway)
-
-
purine deoxyribonucleosides degradation I
-
-
purine deoxyribonucleosides degradation II
-
-
Purine metabolism
-
-
purine metabolism
-
-
purine nucleobases degradation I (anaerobic)
-
-
purine nucleobases degradation II (anaerobic)
-
-
purine ribonucleosides degradation
-
-
putrescine biosynthesis I
-
-
putrescine biosynthesis II
-
-
putrescine biosynthesis III
-
-
putrescine degradation I
-
-
putrescine degradation III
-
-
putrescine degradation IV
-
-
putrescine degradation V
-
-
pyoverdine I biosynthesis
-
-
pyridoxal 5'-phosphate biosynthesis I
-
-
pyridoxal 5'-phosphate salvage I
-
-
pyridoxal 5'-phosphate salvage II (plants)
-
-
pyrimidine deoxyribonucleosides degradation
-
-
pyrimidine deoxyribonucleosides salvage
-
-
pyrimidine deoxyribonucleotides biosynthesis from CTP
-
-
pyrimidine deoxyribonucleotides de novo biosynthesis I
-
-
pyrimidine deoxyribonucleotides de novo biosynthesis III
-
-
pyrimidine deoxyribonucleotides de novo biosynthesis IV
-
-
Pyrimidine metabolism
-
-
pyrimidine metabolism
-
-
pyrimidine nucleobases salvage I
-
-
pyrimidine nucleobases salvage II
-
-
pyrimidine ribonucleosides degradation
-
-
pyrimidine ribonucleosides salvage I
-
-
pyrimidine ribonucleosides salvage II
-
-
pyrimidine ribonucleosides salvage III
-
-
pyrrolnitrin biosynthesis
-
-
pyruvate decarboxylation to acetyl CoA I
-
-
pyruvate decarboxylation to acetyl CoA II
-
-
pyruvate fermentation to (R)-acetoin I
-
-
pyruvate fermentation to (R)-acetoin II
-
-
pyruvate fermentation to (S)-acetoin
-
-
pyruvate fermentation to (S)-lactate
-
-
pyruvate fermentation to acetate I
-
-
pyruvate fermentation to acetate II
-
-
pyruvate fermentation to acetate III
-
-
pyruvate fermentation to acetate IV
-
-
pyruvate fermentation to acetate VI
-
-
pyruvate fermentation to acetate VII
-
-
pyruvate fermentation to acetate VIII
-
-
pyruvate fermentation to acetoin III
-
-
pyruvate fermentation to acetone
-
-
pyruvate fermentation to butanoate
-
-
pyruvate fermentation to butanol I
-
-
pyruvate fermentation to butanol II (engineered)
-
-
pyruvate fermentation to ethanol I
-
-
pyruvate fermentation to ethanol II
-
-
pyruvate fermentation to ethanol III
-
-
pyruvate fermentation to hexanol (engineered)
-
-
pyruvate fermentation to isobutanol (engineered)
-
-
pyruvate fermentation to propanoate I
-
-
pyruvate fermentation to propanoate II (acrylate pathway)
-
-
Pyruvate metabolism
-
-
pyruvate to cytochrome bo oxidase electron transfer
-
-
quinate degradation
-
-
quinate degradation I
-
-
quinate degradation II
-
-
reactive oxygen species degradation
-
-
rebeccamycin biosynthesis
-
-
reductive acetyl coenzyme A pathway
-
-
reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
-
-
reductive monocarboxylic acid cycle
-
-
reductive TCA cycle I
-
-
reductive TCA cycle II
-
-
resolvin D biosynthesis
-
-
resorcinol degradation
retinol biosynthesis
-
-
Retinol metabolism
-
-
Riboflavin metabolism
-
-
rosmarinic acid biosynthesis I
-
-
rubber degradation I
-
-
rubber degradation II
-
-
Rubisco shunt
-
-
S-adenosyl-L-methionine biosynthesis
-
-
S-adenosyl-L-methionine salvage I
-
-
S-adenosyl-L-methionine salvage II
-
-
saframycin A biosynthesis
-
-
salicin biosynthesis
-
-
salicortin biosynthesis
-
-
salicylate biosynthesis I
-
-
salicylate degradation I
-
-
salicylate degradation II
-
-
salicylate degradation IV
-
-
salicylate glucosides biosynthesis II
-
-
salidroside biosynthesis
-
-
salinosporamide A biosynthesis
-
-
secologanin and strictosidine biosynthesis
-
-
sedoheptulose bisphosphate bypass
-
-
seleno-amino acid biosynthesis (plants)
-
-
seleno-amino acid detoxification and volatilization I
-
-
seleno-amino acid detoxification and volatilization III
-
-
Selenocompound metabolism
-
-
selenocysteine biosynthesis
-
-
serine metabolism
-
-
serine racemization
-
-
serotonin and melatonin biosynthesis
-
-
serotonin degradation
-
-
sesamin biosynthesis
-
-
sesquiterpene lactone biosynthesis
-
-
Sesquiterpenoid and triterpenoid biosynthesis
-
-
shikimate degradation I
-
-
shikimate degradation II
-
-
sitosterol degradation to androstenedione
-
-
sophorosyloxydocosanoate deacetylation
-
-
sorbitol biosynthesis II
-
-
sorgoleone biosynthesis
-
-
spermidine biosynthesis I
-
-
spermidine biosynthesis II
-
-
spermidine biosynthesis III
-
-
spermine and spermidine degradation II
-
-
spermine biosynthesis
-
-
Sphingolipid metabolism
-
-
sphingosine and sphingosine-1-phosphate metabolism
-
-
Spodoptera littoralis pheromone biosynthesis
-
-
spongiadioxin C biosynthesis
-
-
sporopollenin precursors biosynthesis
-
-
stachyose degradation
-
-
staphyloferrin A biosynthesis
-
-
Starch and sucrose metabolism
-
-
starch biosynthesis
-
-
starch degradation
-
-
starch degradation III
-
-
starch degradation V
-
-
Staurosporine biosynthesis
-
-
stearate biosynthesis I (animals)
-
-
stearate biosynthesis II (bacteria and plants)
-
-
stearate biosynthesis III (fungi)
-
-
sterculate biosynthesis
-
-
Steroid biosynthesis
-
-
Steroid degradation
-
-
Steroid hormone biosynthesis
-
-
sterol:steryl ester interconversion (yeast)
-
-
Stilbenoid, diarylheptanoid and gingerol biosynthesis
-
-
streptomycin biosynthesis
-
-
Streptomycin biosynthesis
-
-
streptorubin B biosynthesis
-
-
styrene degradation
-
-
Styrene degradation
-
-
suberin monomers biosynthesis
succinate fermentation to butanoate
-
-
succinate to cytochrome bd oxidase electron transfer
-
-
succinate to cytochrome bo oxidase electron transfer
-
-
sucrose biosynthesis I (from photosynthesis)
-
-
sucrose biosynthesis II
-
-
sucrose biosynthesis III
-
-
sucrose degradation II (sucrose synthase)
-
-
sucrose degradation III (sucrose invertase)
-
-
sucrose degradation IV (sucrose phosphorylase)
-
-
sucrose degradation V (sucrose alpha-glucosidase)
-
-
sulfate reduction
-
-
sulfide oxidation I (to sulfur globules)
-
-
sulfide oxidation III (to sulfite)
-
-
sulfite oxidation II
-
-
sulfite oxidation III
-
-
sulfoacetaldehyde degradation IV
-
-
sulfolactate degradation III
-
-
sulfolipid biosynthesis
-
-
sulfopterin metabolism
-
-
sulfoquinovose degradation II
-
-
sulfoquinovosyl diacylglycerol biosynthesis
-
-
Sulfur metabolism
-
-
superoxide radicals degradation
-
-
superpathway of (Kdo)2-lipid A biosynthesis
-
-
superpathway of 5-aminoimidazole ribonucleotide biosynthesis
-
-
superpathway of coenzyme A biosynthesis III (mammals)
-
-
superpathway of fatty acid biosynthesis initiation (E. coli)
-
-
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
superpathway of glucose and xylose degradation
-
-
superpathway of glycolysis and the Entner-Doudoroff pathway
-
-
superpathway of glyoxylate cycle and fatty acid degradation
-
-
superpathway of L-aspartate and L-asparagine biosynthesis
-
-
superpathway of methylsalicylate metabolism
-
-
superpathway of nicotine biosynthesis
-
-
superpathway of ornithine degradation
-
-
superpathway of photosynthetic hydrogen production
-
-
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
-
-
Synthesis and degradation of ketone bodies
-
-
syringate degradation
-
-
Taurine and hypotaurine metabolism
-
-
taurine degradation
-
-
taurine degradation IV
-
-
taxol biosynthesis
-
-
TCA cycle I (prokaryotic)
-
-
TCA cycle II (plants and fungi)
-
-
TCA cycle III (animals)
-
-
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
TCA cycle V (2-oxoglutarate synthase)
-
-
TCA cycle VI (Helicobacter)
-
-
TCA cycle VII (acetate-producers)
-
-
Terpenoid backbone biosynthesis
-
-
testosterone and androsterone degradation to androstendione (aerobic)
-
-
tetracenomycin C biosynthesis
-
-
tetradecanoate biosynthesis (mitochondria)
-
-
tetrahydrofolate biosynthesis
-
-
tetrahydrofolate metabolism
-
-
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
-
-
tetrahydropteridine recycling
-
-
tetrahydroxyxanthone biosynthesis (from benzoate)
-
-
tetrapyrrole biosynthesis I (from glutamate)
-
-
tetrapyrrole biosynthesis II (from glycine)
-
-
theobromine biosynthesis I
-
-
theophylline degradation
-
-
Thiamine metabolism
-
-
thioredoxin pathway
-
-
threo-tetrahydrobiopterin biosynthesis
-
-
threonine metabolism
-
-
thymine degradation
-
-
thyroid hormone biosynthesis
-
-
Toluene degradation
-
-
toluene degradation
-
-
toluene degradation to 2-hydroxypentadienoate (via 4-methylcatechol)
-
-
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
toluene degradation to 4-methylphenol
-
-
toluene degradation to benzoate
-
-
toluene degradation to benzoyl-CoA (anaerobic)
-
-
trans-3-hydroxy-L-proline degradation
-
-
trans-4-hydroxy-L-proline degradation I
-
-
trans-4-hydroxy-L-proline degradation II
-
-
trans-caffeate degradation (aerobic)
-
-
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
trehalose biosynthesis IV
-
-
trehalose degradation I (low osmolarity)
-
-
trehalose degradation II (cytosolic)
-
-
trehalose degradation IV
-
-
trehalose degradation V
-
-
triacylglycerol degradation
-
-
triethylamine degradation
-
-
tRNA charging
-
-
tRNA processing
-
-
Tropane, piperidine and pyridine alkaloid biosynthesis
-
-
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
type I lipoteichoic acid biosynthesis (S. aureus)
-
-
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
ubiquinol-10 biosynthesis (early decarboxylation)
-
-
ubiquinol-10 biosynthesis (late decarboxylation)
-
-
ubiquinol-6 biosynthesis (late decarboxylation)
-
-
ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast)
-
-
ubiquinol-7 biosynthesis (early decarboxylation)
-
-
ubiquinol-7 biosynthesis (late decarboxylation)
-
-
ubiquinol-8 biosynthesis (early decarboxylation)
-
-
ubiquinol-8 biosynthesis (late decarboxylation)
-
-
ubiquinol-9 biosynthesis (early decarboxylation)
-
-
ubiquinol-9 biosynthesis (late decarboxylation)
-
-
Ubiquinone and other terpenoid-quinone biosynthesis
-
-
ubiquinone biosynthesis
-
-
UDP-alpha-D-galactofuranose biosynthesis
-
-
UDP-alpha-D-glucose biosynthesis
-
-
UDP-alpha-D-glucuronate biosynthesis (from myo-inositol)
-
-
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UMP biosynthesis I
-
-
UMP biosynthesis II
-
-
UMP biosynthesis III
-
-
uracil degradation I (reductive)
-
-
urate conversion to allantoin I
-
-
urea cycle
urea degradation II
-
-
UTP and CTP dephosphorylation I
-
-
valine metabolism
-
-
Valine, leucine and isoleucine biosynthesis
-
-
Valine, leucine and isoleucine degradation
-
-
valproate beta-oxidation
-
-
vancomycin resistance I
-
-
vancomycin resistance II
-
-
vanillin and vanillate degradation I
-
-
vanillin and vanillate degradation II
-
-
vanillin biosynthesis I
-
-
Various types of N-glycan biosynthesis
-
-
vitamin B1 metabolism
-
-
vitamin B6 degradation
-
-
Vitamin B6 metabolism
-
-
vitamin B6 metabolism
-
-
vitamin E biosynthesis (tocopherols)
-
-
vitamin E biosynthesis (tocotrienols)
-
-
vitamin E metabolism
-
-
vitamin K metabolism
-
-
vitamin K-epoxide cycle
-
-
wax esters biosynthesis II
-
-
xanthine and xanthosine salvage
-
-
Xylene degradation
-
-
xylitol degradation
-
-
xyloglucan degradation II (exoglucanase)
-
-
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE