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Information on Organism Pseudomonas denitrificans (nom. rej.)

Synonyms:
ATCC 19244; Bacillus denitrijcans jluorescens Christensen 1903; Bacillus denitrijcans jluorescens; CCEB 525; culture-collection:NRRL:B:1028; IAM 12023; NCIB 10465; NCIB:10465; NCTC 1656; NRRL B-1028; "Pseudomonas denitrificans" (Christensen 1903) Bergey et al. 1923, nom. rejic.; Pseudomonas denitrificans; Pseudomonas denitrificans (nom. rej.); Pseudomonas denitrificans (nomen rejiciendum);
Word Map for Organism Pseudomonas denitrificans (nom. rej.)
TaxTree of Organism Pseudomonas denitrificans (nom. rej.)
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Gammaproteobacteria can be found in Brenda BRENDA pathways(class)
Pseudomonadales can be found in Brenda BRENDA pathways(order)
Pseudomonadaceae can be found in Brenda BRENDA pathways(family)
Pseudomonas can be found in Brenda BRENDA pathways(genus)
Pseudomonas pertucinogena group can be found in Brenda (species group)
Pseudomonas denitrificans (nom. rej.) can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
1,3-propanediol biosynthesis (engineered)
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PWY-7385
2-amino-3-hydroxycyclopent-2-enone biosynthesis
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PWY-7536
2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7965
3-hydroxypropanoate cycle
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PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
3-methylbutanol biosynthesis (engineered)
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PWY-6871
4-aminobutanoate degradation III
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PWY-6536
4-aminobutanoate degradation V
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PWY-5022
4-methylphenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7963
5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7969
5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7966
5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7967
5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7968
8-amino-7-oxononanoate biosynthesis I
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PWY-6519
acetaldehyde biosynthesis I
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PWY-6333
acetylene degradation (anaerobic)
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P161-PWY
acrylonitrile degradation I
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PWY-7308
adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7964
adenosine ribonucleotides de novo biosynthesis
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PWY-7219
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I
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PWY-5509
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP II
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PWY-7975
adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide
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PWY-7962
adenosylcobinamide-GDP salvage from assorted adenosylcobamides
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PWY-8282
adenosylcobinamide-GDP salvage from cobinamide I
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PWY-7971
adenosylcobinamide-GDP salvage from cobinamide II
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PWY-7972
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
Alanine, aspartate and glutamate metabolism
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aldoxime degradation
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P345-PWY
alpha-Linolenic acid metabolism
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Amino sugar and nucleotide sugar metabolism
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Aminobenzoate degradation
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ammonia oxidation II (anaerobic)
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P303-PWY
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
Arginine and proline metabolism
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arginine metabolism
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arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Ascorbate and aldarate metabolism
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benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7970
beta-Alanine metabolism
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Biosynthesis of secondary metabolites
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Biotin metabolism
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Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
Caprolactam degradation
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Carbon fixation pathways in prokaryotes
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Chloroalkane and chloroalkene degradation
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CO2 fixation in Crenarchaeota
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cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion)
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PWY-7377
cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation)
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PWY-7376
conversion of succinate to propanoate
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PWY0-43
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
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PWY-7854
cyclopropane fatty acid (CFA) biosynthesis
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PWY0-541
Cysteine and methionine metabolism
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D-xylose degradation to ethylene glycol (engineered)
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PWY-7178
degradation of aromatic, nitrogen containing compounds
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denitrification
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detoxification of reactive carbonyls in chloroplasts
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PWY-6786
Drug metabolism - cytochrome P450
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erythritol biosynthesis I
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PWY-8372
erythritol biosynthesis II
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PWY-8373
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol fermentation
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ethanolamine utilization
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PWY0-1477
factor 430 biosynthesis
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PWY-5196
Fatty acid degradation
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Fe(II) oxidation
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PWY-6692
Fluorobenzoate degradation
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folate transformations I
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PWY-2201
folate transformations II (plants)
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PWY-3841
folate transformations III (E. coli)
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1CMET2-PWY
Galactose metabolism
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glutamate and glutamine metabolism
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glycerol degradation III
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PWY-6130
Glycerolipid metabolism
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Glycerophospholipid metabolism
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glycine betaine degradation I
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PWY-3661
glycine betaine degradation II (mammalian)
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PWY-3661-1
Glycine, serine and threonine metabolism
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Glycolysis / Gluconeogenesis
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Glyoxylate and dicarboxylate metabolism
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heme metabolism
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heterolactic fermentation
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P122-PWY
IAA biosynthesis
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indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-isoleucine degradation II
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PWY-5078
L-leucine degradation III
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PWY-5076
L-methionine biosynthesis I
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HOMOSER-METSYN-PWY
L-methionine biosynthesis III
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HSERMETANA-PWY
L-methionine degradation III
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PWY-5082
L-methionine salvage from L-homocysteine
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ADENOSYLHOMOCYSCAT-PWY
L-phenylalanine degradation III
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PWY-5079
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tryptophan degradation X (mammalian, via tryptamine)
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PWY-6307
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation I
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VALDEG-PWY
L-valine degradation II
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PWY-5057
leucine metabolism
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lipid metabolism
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Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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methionine metabolism
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methylaspartate cycle
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
mRNA capping I
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PWY-7375
mycolate biosynthesis
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PWYG-321
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
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PWY-6397
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
Naphthalene degradation
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Nicotinate and nicotinamide metabolism
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nitrate assimilation
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nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
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PWY-381
nitrate reduction IV (dissimilatory)
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PWY-5674
nitrate reduction V (assimilatory)
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PWY-5675
nitrate reduction VI (assimilatory)
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PWY490-3
nitrate reduction VII (denitrification)
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PWY-6748
nitrate reduction X (dissimilatory, periplasmic)
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PWY0-1584
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
Nitrogen metabolism
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noradrenaline and adrenaline degradation
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PWY-6342
O-antigen building blocks biosynthesis (E. coli)
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OANTIGEN-PWY
O-Antigen nucleotide sugar biosynthesis
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One carbon pool by folate
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Oxidative phosphorylation
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oxidative phosphorylation
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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Pentose and glucuronate interconversions
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phenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7961
Phenylalanine metabolism
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phenylalanine metabolism
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phenylethanol biosynthesis
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PWY-5751
phosphopantothenate biosynthesis I
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PANTO-PWY
Photosynthesis
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photosynthesis light reactions
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PWY-101
phytol degradation
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PWY66-389
Porphyrin and chlorophyll metabolism
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Propanoate metabolism
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propanol degradation
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propanoyl CoA degradation I
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PROPIONMET-PWY
propionate fermentation
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Purine metabolism
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purine metabolism
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Pyrimidine metabolism
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pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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Retinol metabolism
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salidroside biosynthesis
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PWY-6802
Selenocompound metabolism
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serotonin degradation
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PWY-6313
serotonin metabolism
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siroheme biosynthesis
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PWY-5194
sterculate biosynthesis
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PWY-4942
Styrene degradation
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succinate fermentation to butanoate
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PWY-5677
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
superpathway of adenosylcobalamin salvage from cobinamide I
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COBALSYN-PWY
superpathway of adenosylcobalamin salvage from cobinamide II
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PWY-6269
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
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PWY-7328
tetrapyrrole biosynthesis I (from glutamate)
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PWY-5188
tetrapyrrole biosynthesis II (from glycine)
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PWY-5189
Thiamine metabolism
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traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
Tryptophan metabolism
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Tyrosine metabolism
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tyrosine metabolism
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UDP-alpha-D-galactofuranose biosynthesis
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PWY-7622
valine metabolism
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Valine, leucine and isoleucine degradation
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vitamin B12 metabolism
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Pseudomonas denitrificans (nom. rej.))
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA