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Information on Organism Phytophthora rubi

Synonyms:
ATCC 90442; ATCC-90442; ATCC:90442; ATCC90442; CBS 967.95; CBS-967.95; CBS:967.95; CBS967.95; CUP 62528; CUP-62528; CUP:62528; CUP62528; IMI 355974; IMI-355974; IMI:355974; IMI355974; P15597; P15597 WPC; Phytophthora fragariae var. rubi; Phytophthora fragariae var. rubi W.F. Wilcox & J.M. Duncan, 1993; Phytophthora rubi; Phytophthora rubi (W.F. Wilcox & J.M. Duncan) Man in 't veld, 2007; WPC P15597; WPC-P15597; WPC:P15597; WPCP15597;
TaxTree of Organism Phytophthora rubi
Condensed Tree View
cellular organisms (cellular root)
Eukaryota can be found in Brenda BRENDA pathways(domain)
Sar can be found in Brenda (clade)
Stramenopiles can be found in Brenda BRENDA pathways(clade)
Oomycota can be found in Brenda BRENDA pathways(phylum)
Peronosporomycetes can be found in Brenda (class)
Peronosporales can be found in Brenda BRENDA pathways(order)
Peronosporaceae can be found in Brenda BRENDA pathways(family)
Phytophthora can be found in Brenda BRENDA pathways(genus)
Phytophthora rubi can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
1,3-propanediol biosynthesis (engineered)
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PWY-7385
1,5-anhydrofructose degradation
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PWY-6992
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
alanine metabolism
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Amino sugar and nucleotide sugar metabolism
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anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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Brassinosteroid biosynthesis
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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chitin biosynthesis
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PWY-6981
Citrate cycle (TCA cycle)
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citric acid cycle
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Cysteine and methionine metabolism
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D-sorbitol biosynthesis I
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PWY-5054
Fe(II) oxidation
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PWY-6692
formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde oxidation I
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RUMP-PWY
GDP-mannose biosynthesis
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PWY-5659
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glucose degradation (oxidative)
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DHGLUCONATE-PYR-CAT-PWY
Glutathione metabolism
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis V (Pyrococcus)
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P341-PWY
Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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GLYOXYLATE-BYPASS
heterolactic fermentation
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P122-PWY
incomplete reductive TCA cycle
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P42-PWY
malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
Metabolic pathways
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Methane metabolism
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methylaspartate cycle
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
nitrogen remobilization from senescing leaves
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PWY-6549
Oxidative phosphorylation
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oxidative phosphorylation
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Pentose phosphate pathway
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pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
Starch and sucrose metabolism
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starch biosynthesis
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PWY-622
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sucrose biosynthesis II
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PWY-7238
sucrose biosynthesis III
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PWY-7347
sucrose degradation II (sucrose synthase)
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PWY-3801
sucrose degradation III (sucrose invertase)
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PWY-621
sucrose degradation IV (sucrose phosphorylase)
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PWY-5384
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VIII (Chlamydia)
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TCA-1
UDP-N-acetyl-D-galactosamine biosynthesis II
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PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
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PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
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UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
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UDPNACETYLGALSYN-PWY
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LINKS TO OTHER DATABASES (specific for Phytophthora rubi)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA