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Information on Organism Pelomonas saccharophila

ATCC 15946; CCUG 32988; CFBP 2433; CIP 59.18; culture-collection:VKM:B:902; DSM 654; HAMBI 373; IAM 14368; JCM 21181; LMG 2256; LMG:2256; NBRC 103037; NCCB 46053; Pelomonas saccharophila (Doudoroff 1940) Xie and Yokota 2005; Pelomonas saccharophila; Pseudomonas saccharophila Doudoroff 1940 (Approved Lists 1980); Pseudomonas saccharophila; VKM B-902; Pseudomonas saccharophilia; [Pseudomonas] saccharophila;

TaxTree of Organism Pelomonas saccharophila

Condensed Tree View

cellular organisms

can be found in Brenda

BRENDA pathways

(superkingdom)

Proteobacteria can be found in Brenda

can be found in Brenda

BRENDA pathways

(phylum)

Betaproteobacteria can be found in Brenda

can be found in Brenda

BRENDA pathways

(class)

Burkholderiales can be found in Brenda

can be found in Brenda

BRENDA pathways

(order)

Comamonadaceae can be found in Brenda

can be found in Brenda

BRENDA pathways

(family)

can be found in Brenda

BRENDA pathways

(genus)

Pelomonas saccharophila

can be found in Brenda

BRENDA pathways

(species)

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1,3-propanediol biosynthesis (engineered)

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PWY-7385

3,6-anhydro-alpha-L-galactopyranose degradation

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PWY-7562

4-deoxy-L-threo-hex-4-enopyranuronate degradation

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PWY-6507

Ascorbate and aldarate metabolism

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beta-D-glucuronide and D-glucuronate degradation

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PWY-7247

Biosynthesis of secondary metabolites

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Calvin-Benson-Bassham cycle

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CALVIN-PWY

Carbon fixation in photosynthetic organisms

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cellulose degradation

cellulose degradation

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Chloroalkane and chloroalkene degradation

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chorismate metabolism

chorismate metabolism

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citric acid cycle

citric acid cycle

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D-arabinose degradation III

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PWY-5519

D-arabinose degradation IV

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PWY-8331

D-fructuronate degradation

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PWY-7242

D-galactonate degradation

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GALACTCAT-PWY

D-galactose degradation II

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GALDEG-PWY

D-galacturonate degradation I

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GALACTUROCAT-PWY

D-glucosaminate degradation

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PWY-7310

degradation of pentoses

degradation of pentoses

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degradation of sugar acids

degradation of sugar acids

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Drug metabolism - other enzymes

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Entner Doudoroff pathway

Entner Doudoroff pathway

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Entner-Doudoroff pathway III (semi-phosphorylative)

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PWY-2221

Entner-Doudoroff shunt

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ENTNER-DOUDOROFF-PWY

ethene biosynthesis V (engineered)

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PWY-7124

Flavone and flavonol biosynthesis

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formaldehyde assimilation II (assimilatory RuMP Cycle)

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PWY-1861

formaldehyde assimilation III (dihydroxyacetone cycle)

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P185-PWY

Fructose and mannose metabolism

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Galactose metabolism

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gluconeogenesis I

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GLUCONEO-PWY

gluconeogenesis II (Methanobacterium thermoautotrophicum)

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PWY-6142

gluconeogenesis III

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PWY66-399

glycogen degradation I

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GLYCOCAT-PWY

glycogen degradation II

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PWY-5941

glycogen metabolism

glycogen metabolism

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glycolysis

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Glycolysis / Gluconeogenesis

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glycolysis I (from glucose 6-phosphate)

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GLYCOLYSIS

glycolysis II (from fructose 6-phosphate)

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PWY-5484

glycolysis III (from glucose)

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ANAGLYCOLYSIS-PWY

glycolysis IV

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PWY-1042

glycolysis V (Pyrococcus)

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P341-PWY

Glycosaminoglycan degradation

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glyoxylate cycle

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GLYOXYLATE-BYPASS

hydrogen oxidation I (aerobic)

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P283-PWY

hydrogen production

hydrogen production

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inulin degradation

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PWY-8314

L-arabinose degradation III

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PWY-5517

L-arabinose degradation IV

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PWY-7295

L-arabinose degradation V

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PWY-8329

L-glucose degradation

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PWY-7130

L-lyxonate degradation

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PWY-7516

luteolin triglucuronide degradation

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PWY-7445

Metabolic pathways

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metabolism of disaccharids

metabolism of disaccharids

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Methane metabolism

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methylaspartate cycle

Microbial metabolism in diverse environments

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mixed acid fermentation

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FERMENTATION-PWY

nitrate assimilation

nitrate assimilation

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nitrogen fixation I (ferredoxin)

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N2FIX-PWY

Nitrogen metabolism

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nitrogen remobilization from senescing leaves

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PWY-6549

Nitrotoluene degradation

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nocardicin A biosynthesis

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PWY-7797

partial TCA cycle (obligate autotrophs)

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PWY-5913

Pentose and glucuronate interconversions

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Pentose phosphate pathway

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pentose phosphate pathway (non-oxidative branch) II

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PWY-8178

photosynthesis

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Porphyrin and chlorophyll metabolism

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Propanoate metabolism

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sedoheptulose bisphosphate bypass

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PWY0-1517

Starch and sucrose metabolism

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starch biosynthesis

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PWY-622

starch degradation

starch degradation

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starch degradation II

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PWY-6724

starch degradation III

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PWY-6731

starch degradation V

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PWY-6737

sucrose biosynthesis I (from photosynthesis)

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SUCSYN-PWY

sucrose biosynthesis II

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PWY-7238

sucrose degradation III (sucrose invertase)

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PWY-621

sucrose degradation IV (sucrose phosphorylase)

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PWY-5384

sucrose degradation V (sucrose alpha-glucosidase)

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PWY66-373

sulfated glycosaminoglycan metabolism

sulfated glycosaminoglycan metabolism

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TCA cycle I (prokaryotic)

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TCA

TCA cycle II (plants and fungi)

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PWY-5690

TCA cycle III (animals)

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PWY66-398

TCA cycle IV (2-oxoglutarate decarboxylase)

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P105-PWY

TCA cycle V (2-oxoglutarate synthase)

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PWY-6969

TCA cycle VI (Helicobacter)

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REDCITCYC

TCA cycle VII (acetate-producers)

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PWY-7254

trehalose biosynthesis V

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PWY-2661

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Pelomonas saccharophila

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commercial preparation

Pelomonas saccharophila

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Manually annotated by BRENDA team

culture condition:galactonate-grown cell

Pelomonas saccharophila

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4974, 5084, 5091

Manually annotated by BRENDA team

culture condition:galactose-grown cell

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Pelomonas saccharophila

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Manually annotated by BRENDA team

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

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Release 2023.1 (January 2023)