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Information on Organism Pectobacterium carotovorum subsp. carotovorum

Synonyms:
Erwinia aroideae; "Erwinia aroideae" (Townsend) Holland; Erwinia carotovora carotovora; Erwinia carotovora subsp. carotovora (Jones 1901) Bergey et al. 1923 (Approved lists 1980); Erwinia carotovora subsp. carotovora; Pectobacterium carotovorum subsp. carotovorum (Jones 1901) Hauben et al. 1999; Pectobacterium carotovorum subsp. carotovorum (Jones 1901) Hauben et al. 1999 emend. Gardan et al. 2003; Pectobacterium carotovorum subsp. carotovorum; Pectobacterium carotovorum subsp. carotovorum (Jones 1901) Hauben &al. 1999 emend. Gardan &al. 2003; Pectobacterium carotovorum subsp. cartovorum; Pectobacterium cartovorum subsp. cartovorum;
Word Map for Organism Pectobacterium carotovorum subsp. carotovorum
TaxTree of Organism Pectobacterium carotovorum subsp. carotovorum
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Gammaproteobacteria can be found in Brenda BRENDA pathways(class)
Enterobacterales can be found in Brenda BRENDA pathways(order)
Pectobacteriaceae can be found in Brenda BRENDA pathways(family)
Pectobacterium can be found in Brenda BRENDA pathways(genus)
Pectobacterium carotovorum can be found in Brenda BRENDA pathways(species)
Pectobacterium carotovorum subsp. carotovorum can be found in Brenda BRENDA pathways(subspecies)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(5R)-carbapenem carboxylate biosynthesis
(S)-lactate fermentation to propanoate, acetate and hydrogen
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-
PWY-8086
(S)-propane-1,2-diol degradation
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-
PWY-7013
1,5-anhydrofructose degradation
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-
PWY-6992
2-arachidonoylglycerol biosynthesis
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PWY-8052
3,6-anhydro-alpha-L-galactopyranose degradation
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PWY-7562
3-methylbutanol biosynthesis (engineered)
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PWY-6871
4-deoxy-L-threo-hex-4-enopyranuronate degradation
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PWY-6507
9-lipoxygenase and 9-allene oxide synthase pathway
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PWY-5407
acetaldehyde biosynthesis I
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PWY-6333
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acetylene degradation (anaerobic)
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P161-PWY
adenosine ribonucleotides de novo biosynthesis
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PWY-7219
alanine metabolism
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Alanine, aspartate and glutamate metabolism
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alpha-linolenate metabolites biosynthesis
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-
PWY-8398
alpha-Linolenic acid metabolism
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alpha-tomatine degradation
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-
PWY18C3-5
Amaryllidacea alkaloids biosynthesis
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PWY-7826
Amino sugar and nucleotide sugar metabolism
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Aminobenzoate degradation
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-
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
Arachidonic acid metabolism
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arachidonic acid metabolism
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Arginine and proline metabolism
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Arginine biosynthesis
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arginine metabolism
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Ascorbate and aldarate metabolism
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ascorbate recycling (cytosolic)
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PWY-6370
aspartate and asparagine metabolism
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Atrazine degradation
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autoinducer AI-1 biosynthesis
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PWY-6157
avenanthramide biosynthesis
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PWY-8157
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
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PWY-6444
beta-D-glucuronide and D-glucuronate degradation
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PWY-7247
Biosynthesis of secondary metabolites
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bupropion degradation
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PWY66-241
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
Caffeine metabolism
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Caprolactam degradation
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Carbapenem biosynthesis
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Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
chitin degradation I (archaea)
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PWY-6855
chitin degradation II (Vibrio)
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PWY-6902
chitin degradation III (Serratia)
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PWY-7822
Chloroalkane and chloroalkene degradation
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cinnamoyl-CoA biosynthesis
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PWY-6457
Citrate cycle (TCA cycle)
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citric acid cycle
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coumarin biosynthesis (via 2-coumarate)
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PWY-5176
Cyanoamino acid metabolism
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cyclic electron flow
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PWY-8270
Cysteine and methionine metabolism
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cytochrome c biogenesis (system I type)
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PWY-8147
D-galactose degradation II
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GALDEG-PWY
D-mannose degradation I
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MANNCAT-PWY
D-myo-inositol (1,4,5)-trisphosphate biosynthesis
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PWY-6351
D-myo-inositol-5-phosphate metabolism
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PWY-6367
D-xylose degradation to ethylene glycol (engineered)
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PWY-7178
degradation of sugar acids
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degradation of sugar alcohols
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detoxification of reactive carbonyls in chloroplasts
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PWY-6786
divinyl ether biosynthesis II
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PWY-5409
Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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ephedrine biosynthesis
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PWY-5883
erythritol biosynthesis I
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-
PWY-8372
erythritol biosynthesis II
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PWY-8373
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol degradation IV
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-
PWY66-162
ethanol fermentation
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-
ethanolamine utilization
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PWY0-1477
ethene biosynthesis III (microbes)
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PWY-6854
Ether lipid metabolism
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Fatty acid degradation
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ferulate and sinapate biosynthesis
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PWY-5168
firefly bioluminescence
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PWY-7913
Flavone and flavonol biosynthesis
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-
Folate biosynthesis
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-
formaldehyde assimilation I (serine pathway)
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PWY-1622
free phenylpropanoid acid biosynthesis
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PWY-2181
Fructose and mannose metabolism
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Galactose metabolism
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ginsenoside metabolism
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-
gluconeogenesis I
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-
GLUCONEO-PWY
gluconeogenesis III
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PWY66-399
glycerol degradation I
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-
PWY-4261
glycerol degradation II
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PWY-6131
glycerol degradation V
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GLYCEROLMETAB-PWY
Glycerolipid metabolism
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Glycerophospholipid metabolism
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-
Glycine, serine and threonine metabolism
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-
glycogen metabolism
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-
Glycolysis / Gluconeogenesis
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Glycosaminoglycan degradation
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-
Glycosphingolipid biosynthesis - ganglio series
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-
Glyoxylate and dicarboxylate metabolism
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-
glyoxylate cycle
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GLYOXYLATE-BYPASS
heterolactic fermentation
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P122-PWY
incomplete reductive TCA cycle
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-
P42-PWY
Inositol phosphate metabolism
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-
inulin degradation
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PWY-8314
Isoquinoline alkaloid biosynthesis
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-
jasmonic acid biosynthesis
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PWY-735
L-arginine degradation V (arginine deiminase pathway)
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-
ARGDEGRAD-PWY
L-arginine degradation XIII (reductive Stickland reaction)
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PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
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PWY-6344
L-asparagine biosynthesis I
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-
ASPARAGINE-BIOSYNTHESIS
L-asparagine degradation I
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ASPARAGINE-DEG1-PWY
L-asparagine degradation III (mammalian)
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-
ASPARAGINE-DEG1-PWY-1
L-isoleucine degradation II
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-
PWY-5078
L-leucine degradation III
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PWY-5076
L-methionine degradation III
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PWY-5082
L-phenylalanine degradation III
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-
PWY-5079
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tryptophan degradation X (mammalian, via tryptamine)
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PWY-6307
L-tyrosine degradation III
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-
PWY3O-4108
L-valine degradation II
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PWY-5057
leucine metabolism
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-
linamarin degradation
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PWY-3121
linoleate metabolites biosynthesis
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PWY-8395
Linoleic acid metabolism
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-
linustatin bioactivation
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PWY-7091
lipid metabolism
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lotaustralin degradation
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PWY-6002
luteolin triglucuronide degradation
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PWY-7445
malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
melatonin degradation I
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PWY-6398
Metabolic pathways
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metabolism of disaccharids
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Metabolism of xenobiotics by cytochrome P450
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-
Methane metabolism
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-
methanol oxidation to formaldehyde IV
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PWY-5506
methionine metabolism
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methylaspartate cycle
Microbial metabolism in diverse environments
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-
mixed acid fermentation
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-
FERMENTATION-PWY
NAD phosphorylation and dephosphorylation
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-
NADPHOS-DEPHOS-PWY
NAD salvage pathway III (to nicotinamide riboside)
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NAD-BIOSYNTHESIS-II
NAD(P)/NADPH interconversion
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PWY-5083
Naphthalene degradation
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-
neolinustatin bioactivation
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-
PWY-7092
nicotine degradation IV
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PWY66-201
nicotine degradation V
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-
PWY66-221
nitric oxide biosynthesis II (mammals)
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PWY-4983
nocardicin A biosynthesis
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PWY-7797
non-pathway related
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noradrenaline and adrenaline degradation
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-
PWY-6342
o-diquinones biosynthesis
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PWY-6752
Other glycan degradation
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-
pectin degradation I
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-
PWY-7246
pectin degradation II
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-
PWY-7248
Penicillin and cephalosporin biosynthesis
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-
Pentose and glucuronate interconversions
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-
periplasmic disulfide bond formation
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-
PWY0-1599
Phenylalanine metabolism
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-
phenylalanine metabolism
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-
Phenylalanine, tyrosine and tryptophan biosynthesis
-
-
phenylethanol biosynthesis
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PWY-5751
phenylpropanoid biosynthesis
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-
PWY-361
Phenylpropanoid biosynthesis
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-
phenylpropanoid biosynthesis
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phenylpropanoid biosynthesis, initial reactions
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PWY1F-467
phenylpropanoids methylation (ice plant)
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PWY-7498
phosphatidate metabolism, as a signaling molecule
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PWY-7039
phospholipases
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LIPASYN-PWY
photosynthesis
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-
photosynthesis light reactions
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PWY-101
phytol degradation
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PWY66-389
plasmalogen biosynthesis I (aerobic)
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-
PWY-7782
plasmalogen degradation
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PWY-7783
Porphyrin and chlorophyll metabolism
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Propanoate metabolism
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-
propanol degradation
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-
Purine metabolism
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-
purine metabolism
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-
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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-
queuosine biosynthesis I (de novo)
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-
PWY-6700
reactive oxygen species degradation
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DETOX1-PWY-1
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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-
PWY-5392
retinol biosynthesis
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-
PWY-6857
Retinol metabolism
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-
rosmarinic acid biosynthesis I
-
-
PWY-5048
salidroside biosynthesis
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-
PWY-6802
serotonin degradation
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-
PWY-6313
serotonin metabolism
-
-
Sphingolipid metabolism
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Starch and sucrose metabolism
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starch degradation
-
-
Steroid hormone biosynthesis
-
-
suberin monomers biosynthesis
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sulfated glycosaminoglycan metabolism
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superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glyoxylate cycle and fatty acid degradation
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-
PWY-561
superpathway of L-aspartate and L-asparagine biosynthesis
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-
ASPASN-PWY
superpathway of scopolin and esculin biosynthesis
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-
PWY-7186
TCA cycle I (prokaryotic)
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-
TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VIII (Chlamydia)
-
-
TCA-1
Thiamine metabolism
-
-
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
triacylglycerol degradation
-
-
LIPAS-PWY
Tryptophan metabolism
-
-
tryptophan metabolism
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-
Tyrosine metabolism
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-
tyrosine metabolism
-
-
urea cycle
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-
urea degradation II
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-
PWY-5704
valine metabolism
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-
vanillin biosynthesis I
-
-
PWY-5665
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
additional information
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temperature-dependent expression
Manually annotated by BRENDA team
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Pectobacterium carotovorum subsp. carotovorum)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA