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Organism related
Word Map for Organism Paracoccus denitrificans
- Paracoccus denitrificans
- oxidoreductase
- reductases
- oxidases
- heme
- denitrification
- methylamine
- sphaeroides
- flavoproteins
-
proton-pumping
-
two-subunit
-
nadh-ubiquinone
-
stopped-flow
-
quinoproteins
-
binuclear
- versutus
- quinol
-
submitochondrial
- azurins
-
proton-translocating
-
cbb3-type
- semiquinone
-
low-spin
- iron-sulfur
- ubiquinol
-
high-spin
- extorquens
- thermus
- rhodobacter
- antimycin
-
electron-transfer
- methylophilus
-
cytochrome-c
- stutzeri
-
two-electron
-
inside-out
-
amicyanin
- ferrocytochrome
-
aa3-type
-
midpoint
-
heme-copper
-
nadh-quinone
- eutrophus
-
energy-transducing
- methylotrophus
TaxTree of Organism Paracoccus denitrificans
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EC NUMBER 
COMMENTARY 
-
preliminary BRENDA-supplied EC number
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
-
-
PWY-7726
(8E,10E)-dodeca-8,10-dienol biosynthesis
-
-
PWY-7654
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7216
(R)-cysteate degradation
-
-
PWY-6642
(R,R)-butanediol biosynthesis
-
-
PWY-5951
(R,R)-butanediol degradation
-
-
PWY3O-246
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
(S)-reticuline biosynthesis I
-
-
PWY-3581
1,2-dichloroethane degradation
-
-
12DICHLORETHDEG-PWY
1,3-dimethylbenzene degradation to 3-methylbenzoate
-
-
PWY-5428
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,4-dimethylbenzene degradation to 4-methylbenzoate
-
-
PWY-5429
1-butanol autotrophic biosynthesis (engineered)
-
-
PWY-6886
10-cis-heptadecenoyl-CoA degradation (yeast)
-
-
PWY-7337
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
-
-
PWY-7339
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
-
-
PWY-7338
2'-deoxymugineic acid phytosiderophore biosynthesis
-
-
PWY-5912
2,5-xylenol and 3,5-xylenol degradation
-
-
PWY-7698
2-amino-3-hydroxycyclopent-2-enone biosynthesis
-
-
PWY-7536
2-deoxy-D-ribose degradation II
-
-
PWY-8058
2-methyl-branched fatty acid beta-oxidation
-
-
PWY-8181
2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7965
2-methylpropene degradation
-
-
PWY-7778
2-nitrotoluene degradation
-
-
PWY-5641
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
-
-
PWY-5531
3-(4-hydroxyphenyl)pyruvate biosynthesis
-
-
PWY-5886
3-chlorotoluene degradation II
-
-
PWY-6104
3-hydroxypropanoate cycle
-
-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
3-phenylpropanoate degradation
-
-
P281-PWY
4-aminobenzoate biosynthesis I
-
-
PWY-6543
4-aminobenzoate biosynthesis II
-
-
PWY-8276
4-aminobutanoate degradation V
-
-
PWY-5022
4-ethylphenol degradation (anaerobic)
-
-
PWY-6080
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxybenzoate biosynthesis I (eukaryotes)
-
-
PWY-5754
4-hydroxybenzoate biosynthesis III (plants)
-
-
PWY-6435
4-oxopentanoate degradation
-
-
PWY-7948
5,6-dimethylbenzimidazole biosynthesis I (aerobic)
-
-
PWY-5523
5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7969
5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7966
5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7967
5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7968
5-oxo-L-proline metabolism
-
-
PWY-7942
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
-
-
PWY-7340
acetaldehyde biosynthesis I
-
-
PWY-6333
acetate and ATP formation from acetyl-CoA I
-
-
PWY0-1312
acetoacetate degradation (to acetyl CoA)
-
-
ACETOACETATE-DEG-PWY
acetone degradation II (to acetoacetate)
-
-
PWY-5533
acetyl-CoA fermentation to butanoate
-
-
PWY-5676
acetylene degradation (anaerobic)
-
-
P161-PWY
adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7964
adenosine ribonucleotides de novo biosynthesis
-
-
PWY-7219
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I
-
-
PWY-5509
adipate biosynthesis
-
-
PWY-8347
adipate degradation
-
-
PWY-8354
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
alkylnitronates degradation
-
-
PWY-723
all-trans-decaprenyl diphosphate biosynthesis
-
-
PWY-5806
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
ammonia oxidation I (aerobic)
-
-
AMMOXID-PWY
ammonia oxidation II (anaerobic)
-
-
P303-PWY
ammonia oxidation III
-
-
PWY-2242
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
androstenedione degradation I (aerobic)
-
-
PWY-6944
androstenedione degradation II (anaerobic)
-
-
PWY-8152
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
assimilatory sulfate reduction II
-
-
SULFMETII-PWY
ATP biosynthesis
-
-
PWY-7980
atromentin biosynthesis
-
-
PWY-7518
bacterial bioluminescence
-
-
PWY-7723
benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7970
benzoate biosynthesis I (CoA-dependent, beta-oxidative)
-
-
PWY-6443
benzoyl-CoA biosynthesis
-
-
PWY-6458
beta-alanine biosynthesis II
-
-
PWY-3941
Bifidobacterium shunt
-
-
P124-PWY
biotin-carboxyl carrier protein assembly
-
-
PWY0-1264
bis(guanylyl molybdopterin) cofactor sulfurylation
-
-
PWY-8164
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
camalexin biosynthesis
-
-
CAMALEXIN-SYN
canavanine degradation
-
-
PWY-31
catechol degradation to 2-hydroxypentadienoate I
-
-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
-
-
PWY-5419
chitin deacetylation
-
-
PWY-7118
cholesterol degradation to androstenedione I (cholesterol oxidase)
-
-
PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
-
-
PWY-6946
cis-zeatin biosynthesis
-
-
PWY-2781
cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion)
-
-
PWY-7377
cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation)
-
-
PWY-7376
coenzyme B biosynthesis
-
-
P241-PWY
coenzyme M biosynthesis II
-
-
PWY-6643
creatinine degradation I
-
-
CRNFORCAT-PWY
creatinine degradation II
-
-
PWY-4722
crotonate fermentation (to acetate and cyclohexane carboxylate)
-
-
PWY-7401
cutin biosynthesis
-
-
PWY-321
cyclic electron flow
-
-
PWY-8270
cyclopropane fatty acid (CFA) biosynthesis
-
-
PWY0-541
cytidylyl molybdenum cofactor sulfurylation
-
-
PWY-8165
cytochrome c biogenesis (system II type)
-
-
PWY-8146
cytochrome c biogenesis (system III type)
-
-
PWY-8145
cytosolic NADPH production (yeast)
-
-
PWY-7268
D-cycloserine biosynthesis
-
-
PWY-7274
D-lactate to cytochrome bo oxidase electron transfer
-
-
PWY0-1565
diethylphosphate degradation
-
-
PWY-5491
docosahexaenoate biosynthesis III (6-desaturase, mammals)
-
-
PWY-7606
Entner-Doudoroff pathway I
-
-
PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
-
-
NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
-
-
PWY-2221
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation IV
-
-
PWY66-162
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis IV (engineered)
-
-
PWY-7126
ethene biosynthesis V (engineered)
-
-
PWY-7124
ethylbenzene degradation (anaerobic)
-
-
PWY-481
ethylmalonyl-CoA pathway
fatty acid beta-oxidation I (generic)
-
-
FAO-PWY
fatty acid beta-oxidation II (plant peroxisome)
-
-
PWY-5136
fatty acid beta-oxidation VI (mammalian peroxisome)
-
-
PWY66-391
fatty acid beta-oxidation VII (yeast peroxisome)
-
-
PWY-7288
fatty acid salvage
-
-
PWY-7094
Fe(II) oxidation
-
-
PWY-6692
FeMo cofactor biosynthesis
-
-
PWY-7710
firefly bioluminescence
-
-
PWY-7913
folate transformations I
-
-
PWY-2201
folate transformations II (plants)
-
-
PWY-3841
folate transformations III (E. coli)
-
-
1CMET2-PWY
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
formaldehyde oxidation I
-
-
RUMP-PWY
formaldehyde oxidation II (glutathione-dependent)
-
-
PWY-1801
formaldehyde oxidation IV (thiol-independent)
-
-
FORMASS-PWY
formate oxidation to CO2
-
-
PWY-1881
formate to dimethyl sulfoxide electron transfer
-
-
PWY0-1356
formate to nitrite electron transfer
-
-
PWY0-1585
gallate degradation III (anaerobic)
-
-
P3-PWY
gliotoxin biosynthesis
-
-
PWY-7533
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucosinolate biosynthesis from dihomomethionine
-
-
PWYQT-4471
glucosinolate biosynthesis from hexahomomethionine
-
-
PWYQT-4475
glucosinolate biosynthesis from homomethionine
-
-
PWY-1187
glucosinolate biosynthesis from pentahomomethionine
-
-
PWYQT-4474
glucosinolate biosynthesis from phenylalanine
-
-
PWY-2821
glucosinolate biosynthesis from tetrahomomethionine
-
-
PWYQT-4473
glucosinolate biosynthesis from trihomomethionine
-
-
PWYQT-4472
glucosinolate biosynthesis from tryptophan
-
-
PWY-601
glucosinolate biosynthesis from tyrosine
-
-
PWY-7901
glutaryl-CoA degradation
-
-
PWY-5177
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glycerol degradation III
-
-
PWY-6130
glycerol degradation to butanol
-
-
PWY-7003
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
-
-
PWY0-1561
glycerol-3-phosphate to fumarate electron transfer
-
-
PWY0-1582
glycine betaine degradation II (mammalian)
-
-
PWY-3661-1
glycogen degradation I
-
-
GLYCOCAT-PWY
glycolate and glyoxylate degradation III
-
-
PWY-6649
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
heme a biosynthesis
-
-
PWY-7856
heme b biosynthesis II (oxygen-independent)
-
-
HEMESYN2-PWY
heme degradation I
-
-
PWY-5874
heterolactic fermentation
-
-
P122-PWY
homocysteine and cysteine interconversion
-
-
PWY-801
hydrogen oxidation II (aerobic, NAD)
-
-
PWY-5382
hydrogen oxidation III (anaerobic, NADP)
-
-
PWY-6512
hydrogen production I
-
-
PWY-6744
hydrogen production II
-
-
PWY-6758
hydrogen production III
-
-
PWY-6759
hydrogen production IV
-
-
PWY-6765
hydrogen production VI
-
-
PWY-6780
hydrogen production VIII
-
-
PWY-6785
hydrogen to dimethyl sulfoxide electron transfer
-
-
PWY0-1577
hydrogen to fumarate electron transfer
-
-
PWY0-1576
hypotaurine degradation
-
-
PWY-7387
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis VI (bacteria)
-
-
TRPIAACAT-PWY
iron reduction and absorption
-
-
PWY-5934
isoprene biosynthesis II (engineered)
-
-
PWY-7391
isopropanol biosynthesis (engineered)
-
-
PWY-6876
itaconate degradation
-
-
PWY-5749
jasmonic acid biosynthesis
-
-
PWY-735
ketogenesis
-
-
PWY66-367
ketolysis
-
-
PWY66-368
L-alanine biosynthesis III
-
-
PWY0-1021
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation IV
-
-
PWY1-2
L-arginine degradation I (arginase pathway)
-
-
ARGASEDEG-PWY
L-arginine degradation VI (arginase 2 pathway)
-
-
ARG-PRO-PWY
L-arginine degradation VII (arginase 3 pathway)
-
-
ARG-GLU-PWY
L-asparagine degradation III (mammalian)
-
-
ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
-
-
ASPARTATESYN-PWY
L-aspartate degradation I
-
-
ASPARTATE-DEG1-PWY
L-aspartate degradation II (aerobic)
-
-
PWY-8291
L-aspartate degradation III (anaerobic)
-
-
PWY-8294
L-carnitine degradation II
-
-
PWY-3641
L-citrulline biosynthesis
-
-
CITRULBIO-PWY
L-cysteine biosynthesis I
-
-
CYSTSYN-PWY
L-cysteine biosynthesis VI (reverse transsulfuration)
-
-
PWY-I9
L-cysteine biosynthesis VII (from S-sulfo-L-cysteine)
-
-
PWY-7870
L-dopa and L-dopachrome biosynthesis
-
-
PWY-6481
L-glutamate biosynthesis III
-
-
GLUTSYNIII-PWY
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation II
-
-
GLUTDEG-PWY
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
L-glutamate degradation VII (to butanoate)
-
-
GLUDEG-II-PWY
L-glutamate degradation XI (reductive Stickland reaction)
-
-
PWY-8190
L-glutamine biosynthesis I
-
-
GLNSYN-PWY
L-glutamine degradation II
-
-
GLUTAMINEFUM-PWY
L-histidine degradation V
-
-
PWY-5031
L-isoleucine biosynthesis I (from threonine)
-
-
ILEUSYN-PWY
L-isoleucine biosynthesis II
-
-
PWY-5101
L-isoleucine biosynthesis III
-
-
PWY-5103
L-isoleucine biosynthesis IV
-
-
PWY-5104
L-isoleucine degradation I
-
-
ILEUDEG-PWY
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation I
-
-
LEU-DEG2-PWY
L-leucine degradation III
-
-
PWY-5076
L-lysine biosynthesis IV
-
-
LYSINE-AMINOAD-PWY
L-lysine biosynthesis V
-
-
PWY-3081
L-lysine fermentation to acetate and butanoate
-
-
P163-PWY
L-malate degradation II
-
-
PWY-7686
L-methionine biosynthesis I
-
-
HOMOSER-METSYN-PWY
L-methionine biosynthesis III
-
-
HSERMETANA-PWY
L-methionine degradation III
-
-
PWY-5082
L-methionine salvage from L-homocysteine
-
-
ADENOSYLHOMOCYSCAT-PWY
L-Ndelta-acetylornithine biosynthesis
-
-
PWY-6922
L-nicotianamine biosynthesis
-
-
PWY-5957
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine biosynthesis III (cytosolic, plants)
-
-
PWY-7432
L-phenylalanine degradation II (anaerobic)
-
-
ANAPHENOXI-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
-
-
PWY-8014
L-serine biosynthesis II
-
-
PWY-8011
L-threonine degradation III (to methylglyoxal)
-
-
THRDLCTCAT-PWY
L-tryptophan degradation IV (via indole-3-lactate)
-
-
TRPKYNCAT-PWY
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation VIII (to tryptophol)
-
-
PWY-5081
L-tryptophan degradation XIII (reductive Stickland reaction)
-
-
PWY-8017
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine degradation I
-
-
TYRFUMCAT-PWY
L-tyrosine degradation II
-
-
PWY-5151
L-tyrosine degradation III
-
-
PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
-
-
PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
-
-
PWY-8016
L-valine biosynthesis
-
-
VALSYN-PWY
L-valine degradation I
-
-
VALDEG-PWY
L-valine degradation II
-
-
PWY-5057
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
-
-
PWY-8377
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
m-cresol degradation
-
-
M-CRESOL-DEGRADATION-PWY
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
menaquinol-4 biosynthesis II
-
-
PWY-7998
methane oxidation to methanol I
-
-
PWY-1641
methanogenesis from acetate
-
-
METH-ACETATE-PWY
methanol oxidation to carbon dioxide
-
-
PWY-7616
methanol oxidation to formaldehyde I
-
-
PWY-6966
methanol oxidation to formaldehyde II
-
-
PWY-6510
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methyl indole-3-acetate interconversion
-
-
PWY-6303
methyl tert-butyl ether degradation
-
-
PWY-7779
methylamine degradation I
-
-
PWY-6967
methylamine degradation II
-
-
PWY-6965
methylaspartate cycle
methylsalicylate degradation
-
-
PWY18C3-24
mevalonate pathway I (eukaryotes and bacteria)
-
-
PWY-922
mevalonate pathway II (haloarchaea)
-
-
PWY-6174
mevalonate pathway III (Thermoplasma)
-
-
PWY-7524
mevalonate pathway IV (archaea)
-
-
PWY-8125
mitochondrial NADPH production (yeast)
-
-
PWY-7269
mixed acid fermentation
-
-
FERMENTATION-PWY
molybdopterin biosynthesis
-
-
PWY-6823
mono-trans, poly-cis decaprenyl phosphate biosynthesis
-
-
PWY-6383
mycolate biosynthesis
-
-
PWYG-321
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
-
-
PWY-6397
N-3-oxalyl-L-2,3-diaminopropanoate biosynthesis
-
-
PWY-8071
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bd oxidase electron transfer II
-
-
PWY0-1568
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
-
-
PWY0-1567
NADH to dimethyl sulfoxide electron transfer
-
-
PWY0-1348
NADH to fumarate electron transfer
-
-
PWY0-1336
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction III (dissimilatory)
-
-
PWY0-1321
nitrate reduction IV (dissimilatory)
-
-
PWY-5674
nitrate reduction IX (dissimilatory)
-
-
PWY0-1581
nitrate reduction V (assimilatory)
-
-
PWY-5675
nitrate reduction VI (assimilatory)
-
-
PWY490-3
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrate reduction VIII (dissimilatory)
-
-
PWY0-1352
nitrate reduction VIIIb (dissimilatory)
-
-
PWY0-1573
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitrogen remobilization from senescing leaves
-
-
PWY-6549
nocardicin A biosynthesis
-
-
PWY-7797
noradrenaline and adrenaline degradation
-
-
PWY-6342
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
O-antigen building blocks biosynthesis (E. coli)
-
-
OANTIGEN-PWY
o-diquinones biosynthesis
-
-
PWY-6752
oleandomycin activation/inactivation
-
-
PWY-6972
oleate beta-oxidation
-
-
PWY0-1337
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
pentachlorophenol degradation
-
-
PCPDEG-PWY
pentose phosphate pathway (non-oxidative branch) I
-
-
NONOXIPENT-PWY
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
pentose phosphate pathway (oxidative branch) I
-
-
OXIDATIVEPENT-PWY
phenylethanol biosynthesis
-
-
PWY-5751
phenylethylamine degradation I
-
-
2PHENDEG-PWY
pheomelanin biosynthesis
-
-
PWY-7917
phosphate acquisition
-
-
PWY-6348
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
photosynthesis light reactions
-
-
PWY-101
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7218
phytol degradation
-
-
PWY66-389
platensimycin biosynthesis
-
-
PWY-8179
polyhydroxybutanoate biosynthesis
-
-
PWY1-3
polyhydroxydecanoate biosynthesis
-
-
PWY-6657
proline betaine degradation I
-
-
P561-PWY
proline to cytochrome bo oxidase electron transfer
-
-
PWY0-1544
propanoate fermentation to 2-methylbutanoate
-
-
PWY-5109
propanoyl CoA degradation I
-
-
PROPIONMET-PWY
protein S-nitrosylation and denitrosylation
-
-
PWY-7798
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
putrescine biosynthesis III
-
-
PWY-46
pyrroloquinoline quinone biosynthesis
-
-
PWY-6420
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to acetate II
-
-
PWY-5482
pyruvate fermentation to acetate IV
-
-
PWY-5485
pyruvate fermentation to acetate V
-
-
PWY-5537
pyruvate fermentation to acetate VI
-
-
PWY-5538
pyruvate fermentation to acetone
-
-
PWY-6588
pyruvate fermentation to butanoate
-
-
CENTFERM-PWY
pyruvate fermentation to butanol I
-
-
PWY-6583
pyruvate fermentation to butanol II (engineered)
-
-
PWY-6883
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to hexanol (engineered)
-
-
PWY-6863
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
pyruvate to cytochrome bo oxidase electron transfer
-
-
PWY-7544
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
ribitol degradation I
-
-
RIBITOLUTIL-PWY
rosmarinic acid biosynthesis I
-
-
PWY-5048
Rubisco shunt
-
-
PWY-5723
S-(6-hydroxy-4-methylhexan-4-yl)-L-cysteinylglycine degradation
-
-
PWY-8302
salicin biosynthesis
-
-
PWY-6766
salicortin biosynthesis
-
-
PWY-6763
salidroside biosynthesis
-
-
PWY-6802
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
selenate reduction
-
-
PWY-6932
seleno-amino acid biosynthesis (plants)
-
-
PWY-6936
serotonin degradation
-
-
PWY-6313
sitosterol degradation to androstenedione
-
-
PWY-6948
starch degradation I
-
-
PWY-842
sterculate biosynthesis
-
-
PWY-4942
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
-
-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
succinate to plastoquinol oxidase
-
-
PWY1YI0-8
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sulfide oxidation I (to sulfur globules)
-
-
P222-PWY
sulfide oxidation III (to sulfite)
-
-
PWY-5285
sulfide oxidation IV (mitochondria)
-
-
PWY-7927
sulfite oxidation I
-
-
PWY-5276
sulfite oxidation IV (sulfite oxidase)
-
-
PWY-5326
sulfoacetaldehyde degradation I
-
-
PWY-1281
sulfolactate degradation II
-
-
PWY-6637
sulfolactate degradation III
-
-
PWY-6638
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of adenosylcobalamin salvage from cobinamide I
-
-
COBALSYN-PWY
superpathway of adenosylcobalamin salvage from cobinamide II
-
-
PWY-6269
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
-
-
GLYCOLYSIS-E-D
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of L-aspartate and L-asparagine biosynthesis
-
-
ASPASN-PWY
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
-
-
PWY-7328
taurine degradation I
-
-
PWY-1263
taurine degradation II
-
-
PWY-1264
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
tetrapyrrole biosynthesis I (from glutamate)
-
-
PWY-5188
tetrapyrrole biosynthesis II (from glycine)
-
-
PWY-5189
thiamine diphosphate biosynthesis III (Staphylococcus)
-
-
PWY-6907
thiamine diphosphate biosynthesis IV (eukaryotes)
-
-
PWY-6908
thiamine diphosphate salvage III
-
-
PWY-6898
thiamine diphosphate salvage IV (yeast)
-
-
PWY-7356
thiazole component of thiamine diphosphate biosynthesis I
-
-
PWY-6892
thiosulfate disproportionation IV (rhodanese)
-
-
PWY-5350
thiosulfate oxidation I (to tetrathionate)
-
-
THIOSULFOX-PWY
thiosulfate oxidation III (multienzyme complex)
-
-
PWY-5296
thiosulfate oxidation IV (multienzyme complex)
-
-
PWY-6677
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
toluene degradation to benzoate
-
-
TOLUENE-DEG-CATECHOL-PWY
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
triacylglycerol degradation
-
-
LIPAS-PWY
tRNA charging
-
-
TRNA-CHARGING-PWY
tRNA processing
-
-
PWY0-1479
tRNA-uridine 2-thiolation and selenation (bacteria)
-
-
PWY-7892
tropane alkaloids biosynthesis
-
-
PWY-5317
ubiquinol-10 biosynthesis (late decarboxylation)
-
-
PWY-5872
UDP-alpha-D-galactofuranose biosynthesis
-
-
PWY-7622
urea cycle
urea degradation II
-
-
PWY-5704
valproate beta-oxidation
-
-
PWY-8182
vernolate biosynthesis III
-
-
PWY-6917
vitamin K-epoxide cycle
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
[2Fe-2S] iron-sulfur cluster biosynthesis
-
-
PWY-7250
ethylmalonyl-CoA pathway
-
-
PWY-5741
methylaspartate cycle
-
-
PWY-6728
urea cycle
-
-
PWY-4984
vitamin K-epoxide cycle
-
-
PWY-7999
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
58, 788, 4485, 4517, 5223, 33964, 34691, 37532, 80991, 134746, 210866, 210868, 246406, 287375, 288106, 289160, 391087, 391406, 391409, 392651, 392680, 392685, 392705, 392706, 392710, 392711, 392717, 392718, 394086, 394516, 394536, 394634, 395028, 395063, 395112, 395114, 395115, 395116, 395118, 395120, 395121, 395124, 395127, 395133, 395134, 395135, 395136, 395137, 395139, 395140, 395141, 395162, 395991, 395995, 395996, 396001, 396003, 396034, 396042, 396044, 396060, 396134, 396137, 396581, 396585, 396586, 396587, 437899, 439946, 439995, 440001, 440003, 440012, 440014, 440015, 440019, 642749, 644782, 651368, 654076, 654628, 654676, 654866, 655553, 656068, 656086, 656282, 657463, 657962, 658057, 658174, 658986, 659035, 659327, 663999, 665643, 671351, 671883, 671947, 671948, 671964, 672034, 672193, 672326, 672352, 673622, 673940, 674003, 674171, 674556, 675248, 675610, 685087, 685218, 685360, 685364, 686067, 686104, 688702, 691038, 691335, 693008, 696375, 697922, 697965, 699390, 699991, 702763, 707412, 707581, 711254, 713510, 713983, 714231, 715266, 715290, 715814, 716750, 718812, 724352, 724402, 724452, 725002, 725643, 726447, 727183, 729048, 730419, 736328, 741886, 741953, 742384, 742385, 747175, 748136, 754108, 757552, 764209, 764669
-
-
-
SwissProt
-
660478, 700984, 723880, 724308, 724419, 725551, 729048, 738522, 740940, 742319, 742965, 743241, 743659, 743677, 748061, 749071, 763257, 763557, 765195, 765320, 765399
A1B198, A1B5I2, A1B5Y0, A1B856, A1B9E3, A1B9Z3, A1BB88, A1BCD5, P05418, P72177, P98002, Q51658, Q51669, Q51705, V5YT97
UniProt
alpha and beta subunits encoded by genes mauA and mauB
UniProt
cytochrome c oxidase with catalase activity; gene ctaG
UniProt
i.e. assimilatory nitrate reductase (NADH) alpha subunit
UniProt
i.e. assimilatory nitrate reductase (NADH) alpha subunit NasC
UniProt
i.e. Thiosphaera pantotropha, heterotrophic nitrifying bacterium
-
-
in cells grown anaerobically and in iron-containing nitrate medium, overview
-
-
P12293 (large subunit, alpha) and P12293 (small subunit, beta)
UniProt
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
-
high activity in cells grown anaerobically in defined medium, low in cells grown in an iron-deficient medium and in cells grown aerobically
-
specific activity of the enzyme is higher in intact cells grown with butyrate than succinate as the sole source of carbon
-
up to the mid-exponential growth phase, used for purification purpose
-
specific activity of the enzyme is higher in intact cells grown with butyrate than succinate as the sole source of carbon
inducible enzyme, organism can grow on taurine as sole carbon source
additional information
-
gene nosZ, transcription of nosZ takes place concomitantly with that of narG under suboxic conditions. Catalytically functional N2OR is synthesized and active in aerobically raised cells transferred to vials with 7 vol% O2 in headspace, but N2O reduction rates are 10 times higher when anaerobic precultures are subjected to the same conditions. Upon oxygen exposure, there is an incomplete and transient inactivation of N2OR that can be ascribed to its lower ability to compete for electrons compared with terminal oxidases
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
-
391087, 391134, 392706, 392717, 392718, 395112, 395115, 395120, 395121, 395127, 395136, 395137, 395139, 395141, 396001, 439946, 440003, 440015, 440019, 656739, 658986, 659327, 671883, 671948, 674003, 724402, 724452, 741886
-
alpha and beta polypeptides, and therefore the active site for nitrate reduction, are located on the cytoplasmic side of the membrane. The gamma polypeptide is the only subunit which is embedded in the membrane
-
-
LINKS TO OTHER DATABASES (specific for Paracoccus denitrificans)
SILVA: 16S/18S rRNA, 23S/28S rRNA
: 146009
