Any feedback?
BRENDA home
Organism related
Word Map for Organism Methylococcus capsulatus
- Methylococcus capsulatus
- monooxygenase
- bath
- parvus
-
methanotrophic
- trichosporium
- methylosinus
- methylomonas
- methanotrophs
- methylomicrobium
- methylocystis
-
methane-oxidizing
- methanica
-
carboxylate-bridged
-
dinuclear
TaxTree of Organism Methylococcus capsulatus
Condensed Tree View
Please wait a moment until all data is loaded. This message will disappear when all data is loaded.
topPlease wait a moment until the data is sorted. This message will disappear when the data is sorted.
EC NUMBER 
COMMENTARY 
-
preliminary BRENDA-supplied EC number
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(aminomethyl)phosphonate degradation
-
-
PWY-7805
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,5-anhydrofructose degradation
-
-
PWY-6992
2-methylpropene degradation
-
-
PWY-7778
2-nitrotoluene degradation
-
-
PWY-5641
2-oxoglutarate decarboxylation to succinyl-CoA
-
-
PWY-5084
24-epi-campesterol, fucosterol, and clionasterol biosynthesis (diatoms)
-
-
PWY-8238
3-hydroxypropanoate cycle
-
-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
acetaldehyde biosynthesis I
-
-
PWY-6333
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
acetylene degradation (anaerobic)
-
-
P161-PWY
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage III
-
-
PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
alpha-amyrin biosynthesis
-
-
PWY-5377
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
ammonia oxidation I (aerobic)
-
-
AMMOXID-PWY
ammonia oxidation III
-
-
PWY-2242
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
arsenic detoxification (mammals)
-
-
PWY-4202
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
benzene degradation II (aerobic)
-
-
PWY-8386
bupropion degradation
-
-
PWY66-241
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
-
-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
camalexin biosynthesis
-
-
CAMALEXIN-SYN
catechol degradation to 2-hydroxypentadienoate I
-
-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
-
-
PWY-5419
catecholamine biosynthesis
cellulose degradation II (fungi)
-
-
PWY-6788
chlorinated phenols degradation
-
-
PWY-6197
cholesterol biosynthesis (algae, late side-chain reductase)
-
-
PWY-8191
cholesterol biosynthesis (diatoms)
-
-
PWY-8239
cholesterol biosynthesis (plants, early side-chain reductase)
-
-
PWY18C3-1
cholesterol biosynthesis II (via 24,25-dihydrolanosterol)
-
-
PWY66-3
CO2 fixation into oxaloacetate (anaplerotic)
-
-
PWYQT-4429
coenzyme B biosynthesis
-
-
P241-PWY
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
-
-
PWY-7854
cyanate degradation
diploterol biosynthesis
-
-
PWY-6098
epoxysqualene biosynthesis
-
-
PWY-5670
ergosterol biosynthesis II
-
-
PWY-7154
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation IV
-
-
PWY66-162
ethanolamine utilization
-
-
PWY0-1477
ethene and chloroethene degradation
-
-
PWY-7776
ethylmalonyl-CoA pathway
Fe(II) oxidation
-
-
PWY-6692
fluoroacetate and fluorothreonine biosynthesis
-
-
PWY-6644
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
formaldehyde oxidation I
-
-
RUMP-PWY
formaldehyde oxidation IV (thiol-independent)
-
-
FORMASS-PWY
formaldehyde oxidation VI (H4MPT pathway)
-
-
PWY-1723
formate oxidation to CO2
-
-
PWY-1881
fructan biosynthesis
-
-
PWY-822
fructan degradation
-
-
PWY-862
ginsenosides biosynthesis
-
-
PWY-5672
gliotoxin biosynthesis
-
-
PWY-7533
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glutathione-peroxide redox reactions
-
-
PWY-4081
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
glyoxylate assimilation
-
-
PWY-5744
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
glyphosate degradation III
-
-
PWY-7807
guanine and guanosine salvage I
-
-
PWY-6620
guanosine nucleotides degradation III
-
-
PWY-6608
heterolactic fermentation
-
-
P122-PWY
hopanoid biosynthesis (bacteria)
-
-
PWY-7072
hydrogen oxidation II (aerobic, NAD)
-
-
PWY-5382
hydrogen production II
-
-
PWY-6758
hydrogen production III
-
-
PWY-6759
hydrogen production VI
-
-
PWY-6780
hydrogen production VIII
-
-
PWY-6785
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
inosine 5'-phosphate degradation
-
-
PWY-5695
isoprene degradation
-
-
PWY-7777
L-aspartate degradation II (aerobic)
-
-
PWY-8291
L-aspartate degradation III (anaerobic)
-
-
PWY-8294
L-glutamate degradation VII (to butanoate)
-
-
GLUDEG-II-PWY
L-glutamine biosynthesis I
-
-
GLNSYN-PWY
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-lysine biosynthesis IV
-
-
LYSINE-AMINOAD-PWY
L-lysine biosynthesis V
-
-
PWY-3081
L-methionine degradation III
-
-
PWY-5082
L-phenylalanine degradation III
-
-
PWY-5079
L-serine biosynthesis II
-
-
PWY-8011
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
-
-
PWY-5057
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
-
-
PWY-8377
lanosterol biosynthesis
-
-
PWY-6132
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
mangrove triterpenoid biosynthesis
-
-
PWY-6109
melatonin degradation I
-
-
PWY-6398
methane oxidation to methanol I
-
-
PWY-1641
methane oxidation to methanol II
-
-
PWY-6742
methanogenesis from H2 and CO2
-
-
METHANOGENESIS-PWY
methanol oxidation to carbon dioxide
-
-
PWY-7616
methanol oxidation to formaldehyde II
-
-
PWY-6510
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methoxylated aromatic compound degradation II
-
-
PWY-8305
methyl indole-3-acetate interconversion
-
-
PWY-6303
methyl-coenzyme M oxidation to CO2
-
-
PWY-5209
methylaspartate cycle
methylsalicylate degradation
-
-
PWY18C3-24
mixed acid fermentation
-
-
FERMENTATION-PWY
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitrogen fixation I (ferredoxin)
-
-
N2FIX-PWY
nitrogen remobilization from senescing leaves
-
-
PWY-6549
nocardicin A biosynthesis
-
-
PWY-7797
noradrenaline and adrenaline degradation
-
-
PWY-6342
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
octane oxidation
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
pentachlorophenol degradation
-
-
PCPDEG-PWY
pentacyclic triterpene biosynthesis
-
-
PWY-7251
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
pentose phosphate pathway (oxidative branch) II
-
-
PWY-7796
phenol degradation I (aerobic)
-
-
PWY-5418
phenylethanol biosynthesis
-
-
PWY-5751
phenylmercury acetate degradation
phosphatidylcholine biosynthesis V
-
-
PWY-6825
phospholipid remodeling (phosphatidylethanolamine, yeast)
-
-
PWY-7409
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
photorespiration I
-
-
PWY-181
photorespiration II
-
-
PWY-8362
photorespiration III
-
-
PWY-8363
phytol degradation
-
-
PWY66-389
phytosterol biosynthesis (plants)
-
-
PWY-2541
propene degradation
-
-
PWY-5534
purine deoxyribonucleosides degradation I
-
-
PWY-7179
purine deoxyribonucleosides degradation II
-
-
PWY-7179-1
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
purine ribonucleosides degradation
-
-
PWY0-1296
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive acetyl coenzyme A pathway II (autotrophic methanogens)
-
-
PWY-7784
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
Rubisco shunt
-
-
PWY-5723
salidroside biosynthesis
-
-
PWY-6802
salinosporamide A biosynthesis
-
-
PWY-6627
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
serotonin degradation
-
-
PWY-6313
sterol biosynthesis (methylotrophs)
-
-
PWY-8026
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VIII (Chlamydia)
-
-
TCA-1
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
toluene degradation to 4-methylphenol
-
-
TOLUENE-DEG-4-OH-PWY
triacylglycerol degradation
-
-
LIPAS-PWY
tRNA charging
-
-
TRNA-CHARGING-PWY
tRNA processing
-
-
PWY0-1479
vanillin biosynthesis I
-
-
PWY-5665
xanthine and xanthosine salvage
-
-
SALVPURINE2-PWY
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
zymosterol biosynthesis
-
-
PWY-6074
catecholamine biosynthesis
-
-
PWY66-301
cyanate degradation
-
-
CYANCAT-PWY
ethylmalonyl-CoA pathway
-
-
PWY-5741
methylaspartate cycle
-
-
PWY-6728
octane oxidation
-
-
P221-PWY
phenylmercury acetate degradation
-
-
P641-PWY
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
3602, 33265, 37506, 288110, 288469, 394347, 394626, 438942, 440058, 657643, 658632, 671722, 671727, 671965, 672049, 672301, 672414, 673211, 673999, 674005, 674145, 674158, 674170, 675248, 675831, 684112, 684114, 684749, 684946, 685113, 686085, 687284, 690034, 690791, 694439, 695279, 695919, 701759, 701850, 702501, 703343, 703745, 706752, 711260, 713934, 716108, 716109, 726715, 727681, 728079, 744688, 745389, 745730, 746420, 752058
-
-
-
UniProt
alpha subunit and beta subunit and gamma subunit
UniProt
alpha- and beta-subunits
UniProt
Bath
288252, 438920, 438922, 438923, 438928, 438929, 438930, 438931, 438932, 438936, 438937, 438938, 438939, 438943, 438944, 438949, 438952, 657810, 658051, 659033, 660351
-
-
enzyme expression is regulated by the availabilty of copper
SwissProt
P22869 (MmoX), P18798 (MmoY), P11987 (MmoZ), P18797 (MmoB), P22868 (MmoC), P22867 (MmoD). The soluble methane monooxygenase (sMMO) consists of four components A/MMOH (composed of alpha/MmoX, beta/MmoY and gamma/MmoZ), B/MMOB (MmoB), C/MMOR (MmoC) and D/MMOD (MmoD)
SwissProt
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
additional information
additional information
G1UBD1 AND Q607G3
transcriptomic profiling of particulate MMO is used to investigate the gene expression pattern in Methylococcus capsulatus during methanotrophic growth in the presence and absence of copper, overview
additional information
P22869 and P18798 and P11987 and P18797 and P22868 and P22867
transcriptomic profiling of soluble MMO is used to investigate the gene expression pattern in Methylococcus capsulatus during methanotrophic growth in the presence and absence of copper, overview
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
noncovalent association with cell surface, exposed to cell exterior
-
AmoB-protein is located in all genera (Nitrosomonas, Nitrosospira, Nitrosococcus, Methylococcus) on the cytoplasmic membrane. In cells of Nitrosomonas and Nitrosococcus additional but less AmoB-labeling is found on the intracytoplasmic membrane
-
-
AmoB-protein is located in all genera (Nitrosomonas, Nitrosospira, Nitrosococcus, Methylococcus) on the cytoplasmic membrane. In cells of Nitrosomonas and Nitrosococcus additional but less AmoB-labeling is found on the intracytoplasmic membrane
-
additional information
-
two distinct enzyme forms exist: a soluble cytoplasmic sMMO and a membrane-bound particulate pMMO
-
P22869 and P18798 and P11987 and P18797 and P22868 and P22867
-
438920, 438922, 438929, 438932, 438936, 438937, 438939, 438942, 701759, 744688, 745157, 745159, 745389, 745535, 745730, 746420
-
cytoplasmatic, soluble enzyme form termed sMMO
-
enzyme from cells grown under conditions of low copper availability
-
438942, 440058, 671727, 684112, 685113, 686085, 687284, 690034, 701759, 702170, 702501, 703343, 706752, 713934, 716108, 716109, 726715, 727340, 728079, 745154, 745721, 745730
-
enzyme from cells grown under conditions of high copper availability is membrane-bound
G1UBD1 AND Q607G3
membrane-bound
-
membrane-bound particulate enzyme form termed pMMO
G1UBD1 AND Q607G3
membrane-bound pMMO is expressed abundantly in high surface area
LINKS TO OTHER DATABASES (specific for Methylococcus capsulatus)
SILVA: 16S/18S rRNA, 23S/28S rRNA
Use of this online version of BRENDA is free under the CC BY 4.0 license. See terms of use for full details.
Release 2023.1 (January 2023)
Legal
Curated at
Member of
