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Information on Organism Geobacter sulfurreducens

TaxTree of Organism Geobacter sulfurreducens
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(5R)-carbapenem carboxylate biosynthesis
(S)-lactate fermentation to propanoate, acetate and hydrogen
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-
PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
2-methylcitrate cycle I
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-
PWY0-42
2-methylcitrate cycle II
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-
PWY-5747
3-hydroxy-4-methyl-anthranilate biosynthesis I
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-
PWY-7717
3-hydroxy-4-methyl-anthranilate biosynthesis II
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PWY-7765
3-methylbutanol biosynthesis (engineered)
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PWY-6871
4-aminobutanoate degradation V
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PWY-5022
5,6-dimethylbenzimidazole biosynthesis II (anaerobic)
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PWY-7729
5-hydroxybenzimidazole biosynthesis (anaerobic)
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PWY-8097
5-methoxy-6-methylbenzimidazole biosynthesis (anaerobic)
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PWY-8095
5-methoxybenzimidazole biosynthesis (anaerobic)
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PWY-8096
acetaldehyde biosynthesis I
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PWY-6333
acetate and ATP formation from acetyl-CoA I
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-
PWY0-1312
acetate fermentation
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-
acetate formation from acetyl-CoA (succinate)
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PWY-5536
acetylene degradation (anaerobic)
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-
P161-PWY
adipate biosynthesis
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-
PWY-8347
adipate degradation
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PWY-8354
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alanine metabolism
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Alanine, aspartate and glutamate metabolism
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alpha-Linolenic acid metabolism
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Aminoacyl-tRNA biosynthesis
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anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
Arginine and proline metabolism
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Arginine biosynthesis
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arsenate detoxification I
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PWY-8264
arsenate detoxification III
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PWY-8263
arsenic detoxification (plants)
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PWY-8259
arsenic detoxification (yeast)
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PWY-4621
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
ATP biosynthesis
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PWY-7980
beta-Alanine metabolism
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Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C5-Branched dibasic acid metabolism
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Carbon fixation pathways in prokaryotes
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Chloroalkane and chloroalkene degradation
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Citrate cycle (TCA cycle)
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-
citric acid cycle
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-
CO2 fixation in Crenarchaeota
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-
coenzyme B biosynthesis
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P241-PWY
coenzyme M biosynthesis
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-
Cysteine and methionine metabolism
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-
D-galactarate degradation I
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GALACTARDEG-PWY
D-glucarate degradation I
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GLUCARDEG-PWY
degradation of sugar acids
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-
Drug metabolism - cytochrome P450
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-
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
ethanol degradation I
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-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol degradation IV
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-
PWY66-162
ethanol fermentation
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-
ethanolamine utilization
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PWY0-1477
ethene biosynthesis II (microbes)
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PWY-6853
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis IV (engineered)
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PWY-7126
ethene biosynthesis V (engineered)
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PWY-7124
Fatty acid degradation
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Fe(II) oxidation
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PWY-6692
FeMo cofactor biosynthesis
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PWY-7710
formate oxidation to CO2
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PWY-1881
formate to nitrite electron transfer
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PWY0-1585
gallate degradation III (anaerobic)
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P3-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
glutamate and glutamine metabolism
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glycerol-3-phosphate to fumarate electron transfer
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PWY0-1582
glycine degradation (reductive Stickland reaction)
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PWY-8015
glycine metabolism
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Glycine, serine and threonine metabolism
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glycolate and glyoxylate degradation I
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GLYCOLATEMET-PWY
Glycolysis / Gluconeogenesis
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-
Glyoxylate and dicarboxylate metabolism
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-
glyoxylate cycle
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GLYOXYLATE-BYPASS
heterolactic fermentation
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P122-PWY
Histidine metabolism
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-
histidine metabolism
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-
hydrogen oxidation I (aerobic)
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P283-PWY
hydrogen production
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-
hydrogen production III
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PWY-6759
hydrogen production VI
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PWY-6780
hydrogen production VIII
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-
PWY-6785
hydrogen to fumarate electron transfer
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-
PWY0-1576
incomplete reductive TCA cycle
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P42-PWY
iron reduction and absorption
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-
PWY-5934
isoleucine metabolism
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-
isoprenoid biosynthesis
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-
isopropanol biosynthesis (engineered)
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PWY-6876
itaconate degradation
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-
PWY-5749
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-arginine degradation I (arginase pathway)
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ARGASEDEG-PWY
L-citrulline biosynthesis
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CITRULBIO-PWY
L-glutamate degradation I
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GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation VI (to pyruvate)
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PWY-5087
L-glutamate degradation VII (to butanoate)
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GLUDEG-II-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-histidine biosynthesis
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HISTSYN-PWY
L-histidine degradation V
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PWY-5031
L-isoleucine biosynthesis II
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-
PWY-5101
L-isoleucine degradation II
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PWY-5078
L-lactaldehyde degradation
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-
L-leucine degradation III
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-
PWY-5076
L-lysine biosynthesis IV
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-
LYSINE-AMINOAD-PWY
L-lysine biosynthesis V
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-
PWY-3081
L-lysine biosynthesis VI
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-
PWY-5097
L-lysine fermentation to acetate and butanoate
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-
P163-PWY
L-methionine degradation III
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-
PWY-5082
L-Ndelta-acetylornithine biosynthesis
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PWY-6922
L-phenylalanine degradation III
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-
PWY-5079
L-proline degradation I
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-
PROUT-PWY
L-threonine degradation I
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-
PWY-5437
L-threonine degradation V
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-
PWY66-428
L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
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PWY-5651
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tryptophan degradation XI (mammalian, via kynurenine)
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PWY-6309
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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-
PWY-5057
lactate fermentation
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-
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
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PWY-8377
leucine metabolism
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lipid metabolism
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-
Lysine biosynthesis
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-
lysine metabolism
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-
Metabolic pathways
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-
Metabolism of xenobiotics by cytochrome P450
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-
Methane metabolism
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methanogenesis from acetate
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METH-ACETATE-PWY
methanol oxidation to formaldehyde IV
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PWY-5506
methionine metabolism
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-
methyl-coenzyme M reduction to methane
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METHFORM-PWY
methylaspartate cycle
methylerythritol phosphate pathway I
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-
NONMEVIPP-PWY
methylerythritol phosphate pathway II
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PWY-7560
Microbial metabolism in diverse environments
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-
mixed acid fermentation
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FERMENTATION-PWY
NAD(P)/NADPH interconversion
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-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
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-
PWY0-1335
NADH to fumarate electron transfer
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PWY0-1336
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
Naphthalene degradation
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-
nitrate reduction IV (dissimilatory)
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PWY-5674
Nitrogen metabolism
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-
nitrogen remobilization from senescing leaves
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PWY-6549
Nitrotoluene degradation
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-
non-pathway related
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noradrenaline and adrenaline degradation
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PWY-6342
oleandomycin activation/inactivation
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-
PWY-6972
ornithine metabolism
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-
oxalate degradation III
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-
PWY-6696
oxalate degradation VI
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-
PWY-7985
Oxidative phosphorylation
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-
oxidative phosphorylation
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-
Pantothenate and CoA biosynthesis
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-
pantothenate biosynthesis
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-
partial TCA cycle (obligate autotrophs)
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-
PWY-5913
phenylalanine metabolism
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-
phenylethanol biosynthesis
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-
PWY-5751
phosphopantothenate biosynthesis I
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PANTO-PWY
Photosynthesis
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-
photosynthesis light reactions
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-
PWY-101
phytol degradation
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-
PWY66-389
Porphyrin and chlorophyll metabolism
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-
proline metabolism
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-
proline to cytochrome bo oxidase electron transfer
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-
PWY0-1544
Propanoate metabolism
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propanol degradation
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-
propionate fermentation
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-
Purine metabolism
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-
purine metabolism
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-
purine nucleobases degradation I (anaerobic)
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P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
pyrimidine deoxyribonucleotides biosynthesis from CTP
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PWY-7210
pyrimidine deoxyribonucleotides de novo biosynthesis I
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-
PWY-7184
pyrimidine deoxyribonucleotides de novo biosynthesis III
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-
PWY-6545
pyrimidine deoxyribonucleotides de novo biosynthesis IV
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PWY-7198
pyruvate decarboxylation to acetyl CoA III
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PWY-8275
pyruvate fermentation to (R)-lactate
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-
PWY-8274
pyruvate fermentation to (S)-lactate
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-
PWY-5481
pyruvate fermentation to acetate I
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-
P142-PWY
pyruvate fermentation to acetate II
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PWY-5482
pyruvate fermentation to acetate III
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-
PWY-5483
pyruvate fermentation to acetate IV
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-
PWY-5485
pyruvate fermentation to acetate V
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-
PWY-5537
pyruvate fermentation to acetate VI
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-
PWY-5538
pyruvate fermentation to acetate VII
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-
PWY-5600
pyruvate fermentation to acetone
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PWY-6588
pyruvate fermentation to butanoate
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CENTFERM-PWY
pyruvate fermentation to butanol I
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-
PWY-6583
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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-
PWY-6587
pyruvate fermentation to hexanol (engineered)
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-
PWY-6863
pyruvate fermentation to isobutanol (engineered)
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-
PWY-7111
pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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-
reactive oxygen species degradation
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-
DETOX1-PWY-1
reductive acetyl coenzyme A pathway
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-
reductive glycine pathway of autotrophic CO2 fixation
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-
PWY-8303
reductive monocarboxylic acid cycle
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-
PWY-5493
reductive TCA cycle I
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-
P23-PWY
reductive TCA cycle II
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-
PWY-5392
Retinol metabolism
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-
salidroside biosynthesis
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PWY-6802
serine metabolism
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-
serotonin degradation
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-
PWY-6313
serotonin metabolism
-
-
succinate fermentation to butanoate
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-
PWY-5677
succinate to chytochrome c oxidase via cytochrome c6
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-
PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
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-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
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PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
succinate to plastoquinol oxidase
-
-
PWY1YI0-8
sulfide oxidation IV (mitochondria)
-
-
PWY-7927
sulfoacetaldehyde degradation I
-
-
PWY-1281
sulfolactate degradation II
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-
PWY-6637
Sulfur metabolism
-
-
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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-
PWY4LZ-257
superpathway of glucose and xylose degradation
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-
PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
Taurine and hypotaurine metabolism
-
-
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
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-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
Terpenoid backbone biosynthesis
-
-
tetrachloroethene degradation
-
-
PCEDEG-PWY
Thiamine metabolism
-
-
thiosulfate disproportionation IV (rhodanese)
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-
PWY-5350
threonine metabolism
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-
tRNA charging
-
-
TRNA-CHARGING-PWY
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
Ubiquinone and other terpenoid-quinone biosynthesis
-
-
UTP and CTP dephosphorylation I
-
-
PWY-7185
valine metabolism
-
-
Valine, leucine and isoleucine biosynthesis
-
-
vancomycin resistance I
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-
PWY-6454
vitamin K-epoxide cycle
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Geobacter sulfurreducens)