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Information on Organism Clostridium sp.

Synonyms:
Anaerobacter sp.; Clostridium sp.;
Word Map for Organism Clostridium sp.
TaxTree of Organism Clostridium sp.
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Firmicutes can be found in Brenda BRENDA pathways(phylum)
Clostridia can be found in Brenda BRENDA pathways(class)
Eubacteriales can be found in Brenda BRENDA pathways(order)
Clostridiaceae can be found in Brenda BRENDA pathways(family)
Clostridium can be found in Brenda BRENDA pathways(genus)
unclassified Clostridium can be found in Brenda
Clostridium sp. can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(1,4)-beta-D-xylan degradation
-
-
PWY-6717
(aminomethyl)phosphonate degradation
-
-
PWY-7805
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,2-propanediol biosynthesis from lactate (engineered)
-
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PWY-7541
1,3-propanediol biosynthesis (engineered)
-
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PWY-7385
1,5-anhydrofructose degradation
-
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PWY-6992
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
2-arachidonoylglycerol biosynthesis
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-
PWY-8052
2-nitrotoluene degradation
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PWY-5641
3-methylbutanol biosynthesis (engineered)
-
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PWY-6871
4-aminobutanoate degradation V
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PWY-5022
acetaldehyde biosynthesis I
-
-
PWY-6333
acetate and ATP formation from acetyl-CoA I
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PWY0-1312
acetoacetate degradation (to acetyl CoA)
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ACETOACETATE-DEG-PWY
acetyl-CoA fermentation to butanoate
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PWY-5676
acetylene degradation (anaerobic)
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-
P161-PWY
adenosine nucleotides degradation I
-
-
PWY-6596
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
adenosine ribonucleotides de novo biosynthesis
-
-
PWY-7219
aerobic toluene degradation
-
-
alanine metabolism
-
-
Alanine, aspartate and glutamate metabolism
-
-
alpha-Linolenic acid metabolism
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-
alpha-tomatine degradation
-
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PWY18C3-5
Amino sugar and nucleotide sugar metabolism
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-
Aminobenzoate degradation
-
-
ammonia assimilation cycle I
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-
PWY-6963
ammonia assimilation cycle II
-
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PWY-6964
ammonia assimilation cycle III
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-
AMMASSIM-PWY
Arginine and proline metabolism
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-
Arginine biosynthesis
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-
Ascorbate and aldarate metabolism
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-
ATP biosynthesis
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-
PWY-7980
Atrazine degradation
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-
Benzoate degradation
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-
beta-D-glucuronide and D-glucuronate degradation
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PWY-7247
Bifidobacterium shunt
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-
P124-PWY
bile acid 7alpha-dehydroxylation
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PWY-7754
bile acids 12-O-epimerization
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-
PWY-8256
bile acids 7-O epimerization
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PWY-8254
Biosynthesis of ansamycins
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-
Biosynthesis of secondary metabolites
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-
Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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-
PWY-7117
C5-Branched dibasic acid metabolism
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caffeine degradation III (bacteria, via demethylation)
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PWY-6538
Calvin-Benson-Bassham cycle
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CALVIN-PWY
Carbon fixation in photosynthetic organisms
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-
Carbon fixation pathways in prokaryotes
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-
catechol degradation to 2-hydroxypentadienoate I
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-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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-
PWY-5419
cellulose and hemicellulose degradation (cellulolosome)
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-
PWY-6784
cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
chitin biosynthesis
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PWY-6981
chitin degradation I (archaea)
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PWY-6855
chitin degradation II (Vibrio)
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PWY-6902
chitin degradation III (Serratia)
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PWY-7822
Chloroalkane and chloroalkene degradation
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Chlorocyclohexane and chlorobenzene degradation
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-
chlorogenic acid degradation
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PWY-6781
Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation in Crenarchaeota
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coumarin biosynthesis (via 2-coumarate)
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PWY-5176
creatinine degradation
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creatinine degradation II
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PWY-4722
Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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-
cysteine metabolism
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-
D-Amino acid metabolism
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-
D-arabinitol degradation I
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DARABITOLUTIL-PWY
D-sorbitol biosynthesis I
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-
PWY-5054
d-xylose degradation
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-
D-xylose degradation I
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XYLCAT-PWY
degradation of pentoses
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-
degradation of sugar acids
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-
degradation of sugar alcohols
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-
diethylphosphate degradation
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PWY-5491
drosopterin and aurodrosopterin biosynthesis
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PWY-7442
Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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Entner Doudoroff pathway
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Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ethanol degradation I
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-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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-
PWY66-21
ethanol degradation IV
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-
PWY66-162
ethanol fermentation
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-
ethanolamine utilization
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PWY0-1477
ethene biosynthesis IV (engineered)
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PWY-7126
Ether lipid metabolism
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Fatty acid degradation
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firefly bioluminescence
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PWY-7913
Flavone and flavonol biosynthesis
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-
Folate biosynthesis
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-
folate polyglutamylation
folate transformations I
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PWY-2201
folate transformations II (plants)
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PWY-3841
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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-
P185-PWY
formaldehyde oxidation
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-
formaldehyde oxidation I
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-
RUMP-PWY
formaldehyde oxidation II (glutathione-dependent)
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PWY-1801
formate assimilation into 5,10-methylenetetrahydrofolate
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PWY-1722
fructan degradation
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PWY-862
Fructose and mannose metabolism
-
-
Galactose metabolism
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-
gallate degradation
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-
gallate degradation III (anaerobic)
-
-
P3-PWY
GDP-mannose biosynthesis
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PWY-5659
ginsenoside metabolism
-
-
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glutamate and glutamine metabolism
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-
glycerol degradation II
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PWY-6131
glycerol degradation III
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-
PWY-6130
glycerol degradation to butanol
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PWY-7003
glycerol degradation V
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GLYCEROLMETAB-PWY
Glycerolipid metabolism
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Glycerophospholipid metabolism
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glycine degradation (reductive Stickland reaction)
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PWY-8015
Glycine, serine and threonine metabolism
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glycogen degradation I
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GLYCOCAT-PWY
glycogen metabolism
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-
glycolysis
-
-
Glycolysis / Gluconeogenesis
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-
glycolysis I (from glucose 6-phosphate)
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-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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-
PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glycosaminoglycan degradation
-
-
Glyoxylate and dicarboxylate metabolism
-
-
glyphosate degradation III
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PWY-7807
gossypol biosynthesis
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PWY-5773
guanosine nucleotides degradation I
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-
PWY-6607
guanosine nucleotides degradation II
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PWY-6606
guanosine nucleotides degradation III
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PWY-6608
guanosine ribonucleotides de novo biosynthesis
-
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PWY-7221
heme metabolism
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-
heterolactic fermentation
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P122-PWY
hydrogen oxidation I (aerobic)
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P283-PWY
hydrogen production
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-
inosine 5'-phosphate degradation
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PWY-5695
Inositol phosphate metabolism
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-
isoleucine metabolism
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justicidin B biosynthesis
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PWY-6824
L-alanine degradation II (to D-lactate)
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-
ALACAT2-PWY
L-aspartate degradation II (aerobic)
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PWY-8291
L-aspartate degradation III (anaerobic)
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PWY-8294
L-cysteine biosynthesis I
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-
CYSTSYN-PWY
L-glutamate degradation I
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GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation VI (to pyruvate)
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PWY-5087
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-glutamine biosynthesis I
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-
GLNSYN-PWY
L-isoleucine biosynthesis III
-
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PWY-5103
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
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PWY-5076
L-lysine fermentation to acetate and butanoate
-
-
P163-PWY
L-methionine degradation III
-
-
PWY-5082
L-phenylalanine degradation III
-
-
PWY-5079
L-threonine degradation I
-
-
PWY-5437
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
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PWY-5057
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
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PWY-8377
leucine metabolism
-
-
linamarin degradation
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PWY-3121
linustatin bioactivation
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-
PWY-7091
lipid metabolism
-
-
lotaustralin degradation
-
-
PWY-6002
luteolin triglucuronide degradation
-
-
PWY-7445
Lysine degradation
-
-
lysine metabolism
-
-
matairesinol biosynthesis
-
-
PWY-5466
Metabolic pathways
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-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methanogenesis from acetate
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-
METH-ACETATE-PWY
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methionine metabolism
-
-
methylaspartate cycle
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
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-
FERMENTATION-PWY
NAD metabolism
-
-
NAD salvage (plants)
-
-
PWY-5381
NAD salvage pathway III (to nicotinamide riboside)
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NAD-BIOSYNTHESIS-II
Naphthalene degradation
-
-
neolinustatin bioactivation
-
-
PWY-7092
Nicotinate and nicotinamide metabolism
-
-
nicotinate degradation III
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PWY-5055
nitrate assimilation
-
-
nitrate reduction II (assimilatory)
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PWY-381
nitrogen fixation I (ferredoxin)
-
-
N2FIX-PWY
Nitrogen metabolism
-
-
nitrogen remobilization from senescing leaves
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PWY-6549
Nitrotoluene degradation
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-
non-pathway related
-
-
noradrenaline and adrenaline degradation
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PWY-6342
One carbon pool by folate
-
-
ornithine metabolism
-
-
Oxidative phosphorylation
-
-
oxidative phosphorylation
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-
Penicillin and cephalosporin biosynthesis
-
-
Pentose and glucuronate interconversions
-
-
Pentose phosphate pathway
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-
pentose phosphate pathway
-
-
pentose phosphate pathway (non-oxidative branch) I
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NONOXIPENT-PWY
pentose phosphate pathway (non-oxidative branch) II
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-
PWY-8178
pentose phosphate pathway (partial)
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-
P21-PWY
phenol degradation
-
-
Phenylalanine metabolism
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-
phenylalanine metabolism
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-
phenylethanol biosynthesis
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-
PWY-5751
Phenylpropanoid biosynthesis
-
-
phospholipases
-
-
LIPASYN-PWY
Photosynthesis
-
-
photosynthesis
-
-
phytol degradation
-
-
PWY66-389
plasmalogen biosynthesis I (aerobic)
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
Polycyclic aromatic hydrocarbon degradation
-
-
Porphyrin and chlorophyll metabolism
-
-
propanoate fermentation to 2-methylbutanoate
-
-
PWY-5109
Propanoate metabolism
-
-
propanol degradation
-
-
protein S-nitrosylation and denitrosylation
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PWY-7798
Purine metabolism
-
-
purine metabolism
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-
purine nucleobases degradation I (anaerobic)
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-
P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
Pyrimidine metabolism
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-
pyruvate fermentation to acetate II
-
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PWY-5482
pyruvate fermentation to acetate IV
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PWY-5485
pyruvate fermentation to acetone
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-
PWY-6588
pyruvate fermentation to ethanol I
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-
PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
pyruvate fermentation to propanoate II (acrylate pathway)
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PWY-5494
Pyruvate metabolism
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-
reactive oxygen species degradation
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DETOX1-PWY-1
reductive acetyl coenzyme A pathway
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-
reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
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CODH-PWY
reductive glycine pathway of autotrophic CO2 fixation
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PWY-8303
reductive monocarboxylic acid cycle
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-
PWY-5493
retinol biosynthesis
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-
PWY-6857
Retinol metabolism
-
-
Rubisco shunt
-
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PWY-5723
salidroside biosynthesis
-
-
PWY-6802
Secondary bile acid biosynthesis
-
-
sedoheptulose bisphosphate bypass
-
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PWY0-1517
seleno-amino acid biosynthesis (plants)
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PWY-6936
Selenocompound metabolism
-
-
serotonin degradation
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PWY-6313
serotonin metabolism
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-
sesamin biosynthesis
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-
PWY-5469
Sphingolipid metabolism
-
-
Starch and sucrose metabolism
-
-
starch biosynthesis
-
-
PWY-622
starch degradation
-
-
starch degradation I
-
-
PWY-842
Steroid hormone biosynthesis
-
-
Styrene degradation
-
-
succinate fermentation to butanoate
-
-
PWY-5677
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
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-
PWY-7238
sucrose biosynthesis III
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PWY-7347
sucrose degradation II (sucrose synthase)
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PWY-3801
sucrose degradation III (sucrose invertase)
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PWY-621
sucrose degradation IV (sucrose phosphorylase)
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PWY-5384
sucrose degradation V (sucrose alpha-glucosidase)
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PWY66-373
sulfopterin metabolism
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Sulfur metabolism
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superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
Taurine and hypotaurine metabolism
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-
tetrachloroethene degradation
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PCEDEG-PWY
tetrapyrrole biosynthesis I (from glutamate)
-
-
PWY-5188
tetrapyrrole biosynthesis II (from glycine)
-
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PWY-5189
theophylline degradation
-
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PWY-6999
Thiamine metabolism
-
-
threonine metabolism
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toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
triacylglycerol degradation
-
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LIPAS-PWY
Tryptophan metabolism
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tunicamycin biosynthesis
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PWY-7821
Tyrosine metabolism
-
-
tyrosine metabolism
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-
Ubiquinone and other terpenoid-quinone biosynthesis
-
-
UDP-N-acetyl-D-galactosamine biosynthesis II
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-
PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
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-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
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UDPNACETYLGALSYN-PWY
urea cycle
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-
urea degradation II
-
-
PWY-5704
ursodeoxycholate biosynthesis (bacteria)
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PWY-7588
UTP and CTP dephosphorylation I
-
-
PWY-7185
valine metabolism
-
-
vitamin K-epoxide cycle
Xylene degradation
-
-
xylitol degradation I
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LARABITOLUTIL-PWY
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
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enzyme in 50% glycerol-containing solution
Manually annotated by BRENDA team
additional information
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enzyme is more active in vegetative cells than in germinating spores
Manually annotated by BRENDA team
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
-
accumulates until bacterial lysis
Manually annotated by BRENDA team
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LINKS TO OTHER DATABASES (specific for Clostridium sp.)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA