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Information on Organism Brassica nigra

TaxTree of Organism Brassica nigra
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(3R)-N-[(2S)-1-hydroxy-6-[(3R)-3-isocyanobutanamido]hexan-2-yl]-3-isocyanobutanamide biosynthesis
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PWY-8320
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
1,3-propanediol biosynthesis (engineered)
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PWY-7385
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
2-methyl-branched fatty acid beta-oxidation
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PWY-8181
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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CHLOROPHYLL-SYN
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
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PWY-5531
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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PWY-7159
4-hydroxy-2-nonenal detoxification
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PWY-7112
4-oxopentanoate degradation
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PWY-7948
6-gingerol analog biosynthesis (engineered)
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PWY-6920
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
alpha-linolenate metabolites biosynthesis
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PWY-8398
alpha-Linolenic acid metabolism
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alpha-tomatine degradation
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PWY18C3-5
Amino sugar and nucleotide sugar metabolism
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ammonia oxidation II (anaerobic)
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P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
anandamide biosynthesis I
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PWY-8051
anandamide biosynthesis II
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PWY-8053
apratoxin A biosynthesis
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PWY-8361
arachidonate metabolites biosynthesis
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PWY-8397
Arachidonic acid metabolism
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arachidonic acid metabolism
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Arginine and proline metabolism
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aromatic glucosinolate activation
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PWY-6684
aromatic polyketides biosynthesis
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PWY-6316
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
avenanthramide biosynthesis
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PWY-8157
baicalein degradation (hydrogen peroxide detoxification)
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PWY-7214
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
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PWY-6444
betanidin degradation
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PWY-5461
Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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Biosynthesis of unsaturated fatty acids
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Brassinosteroid biosynthesis
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Butanoate metabolism
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C20 prostanoid biosynthesis
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PWY66-374
C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
C5-Branched dibasic acid metabolism
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Calvin-Benson-Bassham cycle
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CALVIN-PWY
camalexin biosynthesis
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CAMALEXIN-SYN
cannabinoid biosynthesis
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PWY-5140
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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Carotenoid biosynthesis
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carotenoid biosynthesis
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CDP-diacylglycerol biosynthesis
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CDP-diacylglycerol biosynthesis I
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PWY-5667
CDP-diacylglycerol biosynthesis II
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PWY0-1319
CDP-diacylglycerol biosynthesis III
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PWY-5981
cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
chitin biosynthesis
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PWY-6981
chitin deacetylation
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PWY-7118
chlorophyll metabolism
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cinnamoyl-CoA biosynthesis
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PWY-6457
CO2 fixation into oxaloacetate (anaplerotic)
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PWYQT-4429
coumarin biosynthesis (via 2-coumarate)
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PWY-5176
curacin A biosynthesis
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PWY-8358
Cutin, suberine and wax biosynthesis
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Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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denitrification
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di-homo-gamma-linolenate metabolites biosynthesis
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PWY-8396
diacylglycerol and triacylglycerol biosynthesis
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TRIGLSYN-PWY
diethylphosphate degradation
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PWY-5491
divinyl ether biosynthesis II
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PWY-5409
Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ephedrine biosynthesis
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PWY-5883
ethanol degradation IV
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PWY66-162
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis V (engineered)
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PWY-7124
fatty acid salvage
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PWY-7094
Fe(II) oxidation
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PWY-6692
ferrichrome A biosynthesis
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PWY-7571
firefly bioluminescence
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PWY-7913
flavonoid biosynthesis
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PWY1F-FLAVSYN
Flavonoid biosynthesis
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flavonoid biosynthesis (in equisetum)
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PWY-6787
flavonoid di-C-glucosylation
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PWY-7897
Folate biosynthesis
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formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
Fructose and mannose metabolism
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Galactose metabolism
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ginsenoside metabolism
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gliotoxin biosynthesis
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PWY-7533
gluconeogenesis
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gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glucosinolate activation
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PWY-5267
Glucosinolate biosynthesis
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glucosinolate biosynthesis from dihomomethionine
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PWYQT-4471
glucosinolate biosynthesis from hexahomomethionine
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PWYQT-4475
glucosinolate biosynthesis from homomethionine
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PWY-1187
glucosinolate biosynthesis from pentahomomethionine
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PWYQT-4474
glucosinolate biosynthesis from phenylalanine
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PWY-2821
glucosinolate biosynthesis from tetrahomomethionine
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PWYQT-4473
glucosinolate biosynthesis from trihomomethionine
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PWYQT-4472
glucosinolate biosynthesis from tryptophan
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PWY-601
glucosinolate biosynthesis from tyrosine
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PWY-7901
glutamate and glutamine metabolism
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Glutathione metabolism
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glutathione metabolism
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glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glycerol degradation to butanol
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PWY-7003
Glycerolipid metabolism
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Glycerophospholipid metabolism
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glycosaminoglycan degradation
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Glyoxylate and dicarboxylate metabolism
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heme degradation I
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PWY-5874
heme metabolism
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heterolactic fermentation
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P122-PWY
icosapentaenoate metabolites biosynthesis
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PWY-8399
indole glucosinolate activation (herbivore attack)
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PWYQT-4476
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
isoprene biosynthesis II (engineered)
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PWY-7391
jasmonic acid biosynthesis
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PWY-735
justicidin B biosynthesis
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PWY-6824
ketogenesis
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PWY66-367
L-carnitine degradation II
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PWY-3641
L-glutamate degradation VI (to pyruvate)
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PWY-5087
L-histidine degradation V
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PWY-5031
L-lactaldehyde degradation
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L-malate degradation II
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PWY-7686
lactate fermentation
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linamarin degradation
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PWY-3121
linoleate metabolites biosynthesis
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PWY-8395
Linoleic acid metabolism
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linustatin bioactivation
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PWY-7091
lipid metabolism
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lotaustralin degradation
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PWY-6002
luteolin triglucuronide degradation
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PWY-7445
matairesinol biosynthesis
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PWY-5466
Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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methane metabolism
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Methanobacterium thermoautotrophicum biosynthetic metabolism
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PWY-6146
methanol oxidation to formaldehyde IV
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PWY-5506
methyl indole-3-acetate interconversion
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PWY-6303
methylaspartate cycle
methylglyoxal degradation
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methylglyoxal degradation I
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PWY-5386
methylglyoxal degradation VIII
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PWY-5386-1
methylsalicylate degradation
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PWY18C3-24
mevalonate metabolism
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mevalonate pathway I (eukaryotes and bacteria)
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PWY-922
mevalonate pathway II (haloarchaea)
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PWY-6174
mevalonate pathway III (Thermoplasma)
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PWY-7524
mevalonate pathway IV (archaea)
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PWY-8125
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
NAD metabolism
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NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
naringenin biosynthesis (engineered)
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PWY-7397
neolinustatin bioactivation
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PWY-7092
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
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PWY-6748
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
Nitrogen metabolism
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nitrogen remobilization from senescing leaves
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PWY-6549
nocardicin A biosynthesis
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PWY-7797
non-pathway related
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octane oxidation
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P221-PWY
oleate biosynthesis II (animals and fungi)
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PWY-5996
oleate biosynthesis III (cyanobacteria)
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PWY-7587
Oxidative phosphorylation
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oxidative phosphorylation
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palmitate biosynthesis II (type II fatty acid synthase)
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PWY-5971
palmitoleate biosynthesis III (cyanobacteria)
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PWY-7589
palmitoleate biosynthesis IV (fungi and animals)
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PWY3O-1801
palmitoyl ethanolamide biosynthesis
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PWY-8055
partial TCA cycle (obligate autotrophs)
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PWY-5913
pentachlorophenol degradation
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PCPDEG-PWY
Pentose phosphate pathway
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-
pentose phosphate pathway (non-oxidative branch) II
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PWY-8178
Phenylalanine metabolism
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-
Phenylpropanoid biosynthesis
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-
phenylpropanoid biosynthesis
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phenylpropanoid biosynthesis, initial reactions
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PWY1F-467
phloridzin biosynthesis
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PWY-6515
phosphate acquisition
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PWY-6348
phosphatidate biosynthesis (yeast)
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PWY-7411
phospholipid remodeling (phosphatidate, yeast)
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PWY-7417
photosynthesis
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photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
plasmalogen biosynthesis I (aerobic)
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PWY-7782
Porphyrin and chlorophyll metabolism
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Propanoate metabolism
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Purine metabolism
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pyruvate fermentation to (S)-lactate
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PWY-5481
Pyruvate metabolism
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reactive oxygen species degradation
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DETOX1-PWY-1
retinol biosynthesis
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PWY-6857
Riboflavin metabolism
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-
rosmarinic acid biosynthesis I
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-
PWY-5048
Rubisco shunt
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-
PWY-5723
sesamin biosynthesis
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PWY-5469
sinapate ester biosynthesis
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PWY-3301
sorgoleone biosynthesis
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-
PWY-5987
sporopollenin precursors biosynthesis
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PWY-6733
Starch and sucrose metabolism
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-
Steroid biosynthesis
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sterol:steryl ester interconversion (yeast)
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PWY-7424
stigma estolide biosynthesis
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-
PWY-6453
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sucrose degradation II (sucrose synthase)
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PWY-3801
sulfopterin metabolism
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superoxide radicals degradation
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DETOX1-PWY
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of methylsalicylate metabolism
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PWY18C3-25
Terpenoid backbone biosynthesis
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Thiamine metabolism
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traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
triacylglycerol degradation
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-
LIPAS-PWY
Tryptophan metabolism
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Valine, leucine and isoleucine degradation
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valproate beta-oxidation
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PWY-8182
vitamin B1 metabolism
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xanthohumol biosynthesis
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PWY-5135
xanthommatin biosynthesis
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PWY-8249
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Brassica nigra)