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TaxTree of Organism Alcaligenes sp.
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EC NUMBER 
COMMENTARY 
-
preliminary BRENDA-supplied EC number
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(1,3)-beta-D-xylan degradation
-
-
PWY-6789
(R)-camphor degradation
-
-
P601-PWY
(S)-camphor degradation
-
-
PWY-6989
1,2-dichloroethane degradation
-
-
12DICHLORETHDEG-PWY
1,4-dichlorobenzene degradation
-
-
14DICHLORBENZDEG-PWY
1,5-anhydrofructose degradation
-
-
PWY-6992
11-oxyandrogens biosynthesis
-
-
PWY-8202
2,4,5-trichlorophenoxyacetate degradation
-
-
PWY-6200
2,4,6-trichlorophenol degradation
-
-
PWY-6178
2,4-dichlorotoluene degradation
-
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PWY-6190
2,5-dichlorotoluene degradation
-
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PWY-6191
2,5-xylenol and 3,5-xylenol degradation
-
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PWY-7698
2-chloroacrylate degradation I
-
-
PWY-7425
2-nitrophenol degradation
-
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PWY-5636
2-nitrotoluene degradation
-
-
PWY-5641
3,4,6-trichlorocatechol degradation
-
-
PWY-6094
3,4-dichlorobenzoate degradation
-
-
PWY-6217
3,4-dichlorotoluene degradation
-
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PWY-6192
3,5-dichlorocatechol degradation
-
-
PWY-6084
3-chlorobenzoate degradation II (via protocatechuate)
-
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PWY-6216
3-chlorocatechol degradation I (ortho)
-
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PWY-6089
3-chlorocatechol degradation II (ortho)
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PWY-6193
4,5-dichlorocatechol degradation
-
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PWY-6093
4-aminophenol degradation
-
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PWY-7081
4-chlorobenzoate degradation
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PWY-6215
4-chlorocatechol degradation
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PWY-6087
4-coumarate degradation (aerobic)
-
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PWY-8002
4-hydroxyacetophenone degradation
-
-
PWY-7002
4-hydroxymandelate degradation
4-methylcatechol degradation (ortho cleavage)
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PWY-6185
4-methylphenol degradation to protocatechuate
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PWY-7700
4-nitrophenol degradation I
-
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PWY-5487
4-nitrophenol degradation II
-
-
PWY-5488
4-sulfocatechol degradation
-
-
PWY-6041
5-chloro-3-methyl-catechol degradation
-
-
PWY-6102
5-nitroanthranilate degradation
-
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PWY-7044
5-oxo-L-proline metabolism
-
-
PWY-7942
acetaldehyde biosynthesis II
-
-
PWY-6330
acrylonitrile degradation I
-
-
PWY-7308
acrylonitrile degradation II
-
-
PWY-7309
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage III
-
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PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenosine nucleotides degradation I
-
-
PWY-6596
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
aldoxime degradation
-
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P345-PWY
ammonia oxidation II (anaerobic)
-
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P303-PWY
arsenic detoxification (mammals)
-
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PWY-4202
astaxanthin biosynthesis (bacteria, fungi, algae)
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PWY-5288
atrazine degradation I (aerobic)
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-
P141-PWY
atrazine degradation III
-
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PWY-5731
beta-(1,4)-mannan degradation
-
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PWY-7456
beta-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation
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PWY-7586
Bifidobacterium shunt
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P124-PWY
biphenyl degradation
-
-
PWY5F9-12
bisphenol A degradation
-
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PWY-7757
butachlor degradation
-
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PWY-7771
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
caffeine degradation III (bacteria, via demethylation)
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PWY-6538
catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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PWY-5419
catechol degradation to beta-ketoadipate
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CATECHOL-ORTHO-CLEAVAGE-PWY
chlorinated phenols degradation
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PWY-6197
chlorosalicylate degradation
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PWY-6107
chlorpyrifos degradation
-
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PWY-8065
cholesterol degradation to androstenedione I (cholesterol oxidase)
-
-
PWY-6945
creatinine degradation I
-
-
CRNFORCAT-PWY
creatinine degradation III
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PWY-4741
cyanide detoxification II
-
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PWY-7142
D-carnitine degradation II
-
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PWY-7472
D-mannose degradation I
-
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MANNCAT-PWY
D-mannose degradation II
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PWY3O-1743
degradation of aromatic, nitrogen containing compounds
-
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dimethylsulfoniopropanoate degradation I (cleavage)
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PWY-6046
diphenyl ethers degradation
-
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PWY-7747
Entner-Doudoroff pathway I
-
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
erythromycin D biosynthesis
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PWY-7106
ethanol degradation IV
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PWY66-162
flexixanthin biosynthesis
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PWY-7947
fluoroacetate and fluorothreonine biosynthesis
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PWY-6644
fluoroacetate degradation
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PWY-6646
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
gamma-glutamyl cycle
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PWY-4041
gamma-hexachlorocyclohexane degradation
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GAMMAHEXCHLORDEG-PWY
gamma-resorcylate degradation I
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PWY-7773
gamma-resorcylate degradation II
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PWY-7772
GDP-mannose biosynthesis
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PWY-5659
gentisate degradation I
-
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PWY-6223
gentisate degradation II
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PWY-7469
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis III
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PWY66-399
glycerol degradation to butanol
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PWY-7003
glycogen degradation II
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PWY-5941
glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
gossypol biosynthesis
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PWY-5773
guanine and guanosine salvage I
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PWY-6620
guanosine nucleotides degradation I
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PWY-6607
guanosine nucleotides degradation II
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PWY-6606
guanosine nucleotides degradation III
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PWY-6608
heterolactic fermentation
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P122-PWY
indole glucosinolate activation (herbivore attack)
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PWYQT-4476
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
indole-3-acetate biosynthesis V (bacteria and fungi)
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PWY-5026
inosine 5'-phosphate degradation
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PWY-5695
inulin degradation
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PWY-8314
justicidin B biosynthesis
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PWY-6824
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-ascorbate biosynthesis I (plants, L-galactose pathway)
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PWY-882
L-ascorbate biosynthesis VII (plants, D-galacturonate pathway)
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PWY-8143
L-carnitine degradation III
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PWY-3602
L-methionine degradation III
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PWY-5082
long chain fatty acid ester synthesis (engineered)
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PWY-6873
mannitol biosynthesis
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PWY-3881
mannitol degradation II
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PWY-3861
matairesinol biosynthesis
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PWY-5466
methanol oxidation to formaldehyde IV
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PWY-5506
methyl indole-3-acetate interconversion
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PWY-6303
methyl parathion degradation
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PWY-5489
methylsalicylate degradation
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PWY-6184, PWY18C3-24
NAD salvage (plants)
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PWY-5381
NAD salvage pathway I (PNC VI cycle)
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PYRIDNUCSAL-PWY
NAD salvage pathway V (PNC V cycle)
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PWY3O-4107
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
nicotinate degradation I
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PWY-722
nicotinate degradation II
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PWY-5033
nicotine degradation II (pyrrolidine pathway)
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PWY-6993
nicotine degradation III (VPP pathway)
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PWY-7128
nicotine degradation IV
-
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PWY66-201
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
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PWY-381
nitrate reduction VII (denitrification)
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PWY-6748
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
nucleoside and nucleotide degradation (archaea)
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PWY-5532
orthanilate degradation
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2ASDEG-PWY
oxalate degradation III
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PWY-6696
paraoxon degradation
-
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PWY-5490
parathion degradation
-
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PARATHION-DEGRADATION-PWY
pentachlorophenol degradation
-
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PCPDEG-PWY
pentose phosphate pathway (non-oxidative branch) II
-
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PWY-8178
peptidoglycan biosynthesis I (meso-diaminopimelate containing)
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PEPTIDOGLYCANSYN-PWY
peptidoglycan biosynthesis II (staphylococci)
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PWY-5265
peptidoglycan biosynthesis III (mycobacteria)
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PWY-6385
peptidoglycan biosynthesis IV (Enterococcus faecium)
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PWY-6471
peptidoglycan biosynthesis V (beta-lactam resistance)
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PWY-6470
peptidoglycan maturation (meso-diaminopimelate containing)
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PWY0-1586
phenol degradation I (aerobic)
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PWY-5418
phenolphthiocerol biosynthesis
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PWY-7742
photosynthesis light reactions
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PWY-101
phytate degradation I
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PWY-4702
picolinate degradation
-
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PWY-8085
pinoresinol degradation
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PWY-7982
polybrominated dihydroxylated diphenyl ethers biosynthesis
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PWY-7934
protocatechuate degradation I (meta-cleavage pathway)
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P184-PWY
protocatechuate degradation II (ortho-cleavage pathway)
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PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY
purine deoxyribonucleosides degradation I
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PWY-7179
purine deoxyribonucleosides degradation II
-
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PWY-7179-1
purine nucleobases degradation II (anaerobic)
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PWY-5497
purine ribonucleosides degradation
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PWY0-1296
pyruvate fermentation to acetate VIII
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PWY-5768
pyruvate fermentation to acetoin III
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PWY3O-440
pyruvate fermentation to ethanol II
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PWY-5486
reactive oxygen species degradation
-
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DETOX1-PWY-1
resorcinol degradation
retinol biosynthesis
-
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PWY-6857
salicylate degradation I
-
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PWY-6183
salicylate degradation II
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PWY-6224
salicylate degradation IV
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PWY-6640
salicylate glucosides biosynthesis II
-
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PWY-6623
salinosporamide A biosynthesis
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PWY-6627
sesamin biosynthesis
-
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PWY-5469
sorbitol biosynthesis II
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PWY-5530
spongiadioxin C biosynthesis
-
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PWY-7935
sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sucrose degradation III (sucrose invertase)
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PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
-
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PWY66-373
superoxide radicals degradation
-
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DETOX1-PWY
superpathway of dimethylsulfoniopropanoate degradation
-
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PWY-6049
superpathway of glucose and xylose degradation
-
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PWY-6901
superpathway of methylsalicylate metabolism
-
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PWY18C3-25
taurine biosynthesis I
-
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PWY-5331
taurine biosynthesis II
-
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PWY-7850
testosterone and androsterone degradation to androstendione (aerobic)
-
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PWY-6943
theophylline degradation
-
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PWY-6999
thiosulfate oxidation I (to tetrathionate)
-
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THIOSULFOX-PWY
toluene degradation II (aerobic) (via 4-methylcatechol)
-
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TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
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TOLUENE-DEG-2-OH-PWY
triacylglycerol degradation
-
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LIPAS-PWY
UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-mannuronate biosynthesis
-
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PWY-7090
UDP-N-acetyl-alpha-D-galactosaminuronate biosynthesis
-
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PWY-7336
vanillin and vanillate degradation II
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PWY-7098
xanthine and xanthosine salvage
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SALVPURINE2-PWY
xyloglucan degradation II (exoglucanase)
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PWY-6807
4-hydroxymandelate degradation
-
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4-HYDROXYMANDELATE-DEGRADATION-PWY
resorcinol degradation
-
-
P343-PWY
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
3753, 3799, 3964, 7065, 7066, 34602, 34604, 34605, 34606, 80792, 172078, 208859, 208867, 208870, 208871, 209201, 209394, 210654, 247105, 247106, 285737, 287214, 288986, 389503, 389720, 389721, 389722, 389725, 389728, 389902, 390206, 390694, 394123, 642101, 644594, 653001, 659633, 659874, 661151, 664958, 674036, 676916, 686105, 686783, 691762, 695307, 697063, 701172, 701879, 712950, 712974, 715147, 715432, 718661, 739846, 740932, 740937, 755886, 764841
-
-
-
SwissProt
properties are conspiciously different from those of Clostridium pasteurianum
-
-
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
additional information
the organism is able to grow on ortho-nitrophenol as the sole source of carbon, nitrogen, and energy
-
high levels of the enzyme is produced at the late stage of cultivation in the presence of citrate and with limited aeration
-
significantly lower activity compared to phenanthrene-grown cells
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
: 
