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Ontology explorer

Gene ontology
Version 2014-12-22
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51 different search results found


Details for Sm-like protein family complex
Gene ontology ID
GO:0120114
Definition
A protein complex containing members of the Like-Sm family of proteins, which includes both the Sm proteins and the Lsm proteins, and which generally form hexameric or heptameric ring structures which bind to RNA. While some of these ring complexes may form independently of RNA, many only form in association with their target RNA. In addition to Lsm-family proteins, many of these complexes contain additional protein members. Members of this family of complexes include the snRNPs which comprise the majority of the spliceosome. Others are involved in the 5' to 3' degradation pathways of mRNAs in the cytoplasm and of unspliced transcripts in the nucleus, as well as other diverse roles
References
1. GOC: bhm
2. GOC: krc
3. PMID 19121818
4. PMID 27627834
Legend
is an element of the parent element
is a part of the parent element
is related to the parent element
derives from the parent element
// at least 1 tissue/ enzyme/ localization link in this branch
// tissue/ enzyme/ localization link to BRENDA
Condensed Tree View
Gene ontology
cellular_component is a
peg and socket contact is a
protein-containing complex is a55 BRENDA localization in branch, click for list of all
PTEN phosphatase complex is a
ribose phosphate diphosphokinase complex is a
Cbp3p-Cbp6 complex is a
collagen type XX trimer is a
counting factor complex is a
Mcs4 RR-MAPKKK complex is a
membrane fusion priming complex is a
ornithine carbamoyltransferase inhibitor complex is a
protein phosphatase inhibitor complex is a
Slit-Robo signaling complex is a
interleukin-7 receptor complex is a
Sm-like protein family complex is a
Lsm2-8 complex is a5 BRENDA localization in branch, click for list of all
ISGF3 complex is a
sigma factor antagonist complex is a
RNA polymerase IV transcription repressor complex is a
translation repressor complex is a
tubulin folding cofactor complex is a
T=25 icosahedral viral capsid is a
natriuretic peptide receptor activity is a
fucose binding is a
galacturonate binding is a
cyclodextrin binding is a
alpha-D-glucan binding is a
Tree view
Gene ontology
biological_process is a
cellular_component is a
cell is a
cellular anatomical entity is a
intracellular is a81 BRENDA localization in branch, click for list of all
other organism part is a
protein-containing complex is a55 BRENDA localization in branch, click for list of all
3-methyl-2-oxobutanoate dehydrogenase (lipoamide) complex is a
3M complex is a
acetyl-CoA decarbonylase/synthase-carbon monoxide dehydrogenase complex is a
actin cytoskeleton-regulatory complex is a54 BRENDA localization in branch, click for list of all
acyl-CoA ceramide synthase complex is a
AIP1-IRE1 complex is a
amyloid-beta complex is a
AnxA2-p11 complex is a
ASAP complex is a
ATPase inhibitor complex is a
Bcl-2 family protein complex is a
BID-BCL-xl complex is a
bub1-bub3 complex is a
CAF-1 complex is a
calprotectin complex is a
catalytic complex is a53 BRENDA localization in branch, click for list of all
1-alkyl-2-acetylglycerophosphocholine esterase complex is a
2-iminoacetate synthase complex is a
ATPase complex is a18 BRENDA localization in branch, click for list of all
beta-galactosidase complex is a17 BRENDA localization in branch, click for list of all
beta-N-acetylhexosaminidase complex is a
carbon phosphorus lyase complex is a
cyclic-nucleotide phosphodiesterase complex is a
exoribonuclease complex is a16 BRENDA localization in branch, click for list of all
glucosidase complex is a
glutamate decarboxylase complex is a
glutaminase complex is a
glutathione synthase complex is a
GTPase complex is a15 BRENDA localization in branch, click for list of all
heparanase complex is a
isoamylase complex is a
methylcrotonoyl-CoA carboxylase complex is a
oxidoreductase complex is a14 BRENDA localization in branch, click for list of all
peptidase complex is a9 BRENDA localization in branch, click for list of all
phosphatase complex is a8 BRENDA localization in branch, click for list of all
ribonuclease MRP complex is a
sulfopyruvate decarboxylase complex is a
transferase complex is a6 BRENDA localization in branch, click for list of all
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase complex is a
acetyltransferase complex is a3 BRENDA localization in branch, click for list of all
aspartate carbamoyltransferase complex is a
cellulose synthase complex is a2 BRENDA localization in branch, click for list of all
primary cell wall cellulose synthase complex is a
secondary cell wall cellulose synthase complex is a1 BRENDA localization in branch, click for list of all
decaprenyl diphosphate synthase complex is a
dehydrodolichyl diphosphate synthase complex is a
methyl coenzyme M reductase complex is a
palmitoyltransferase complex is a
riboflavin synthase complex is a
SUMO ligase complex is a
transferase complex, transferring phosphorus-containing groups is a
adenylyltransferase complex is a
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase complex is a
creatine kinase complex is a
polyphosphate kinase complex is a
protein kinase complex is a1 BRENDA localization in branch, click for list of all
pyruvate kinase complex is a
ribose phosphate diphosphokinase complex is a
xylanosome is a
[Ni-Fe] hydrogenase complex is a
Cbf1-Met4-Met28 complex is a
Cbp3p-Cbp6 complex is a
CD20-Lck-Fyn complex is a
CD20-Lck-Lyn-Fyn complex is a
Cdc24p-Far1p-Gbetagamma complex is a
cell envelope Sec protein transport complex is a
CENP-A recruiting complex is a
chaperone complex is a33 BRENDA localization in branch, click for list of all
CHOP-ATF3 complex is a
CoA-synthesizing protein complex is a
collagen trimer is a
counting factor complex is a
CSF1-CSF1R complex is a
cytochrome complex is a32 BRENDA localization in branch, click for list of all
DiaA complex is a
DNA bending complex is a
DNA packaging complex is a31 BRENDA localization in branch, click for list of all
DNA recombinase mediator complex is a
DNA repair complex is a30 BRENDA localization in branch, click for list of all
Shu complex is a29 BRENDA localization in branch, click for list of all
DNA topoisomerase III-beta-TDRD3 complex is a
Dom34-Hbs1 complex is a
Dxr protein complex is a
EDS1 disease-resistance complex is a
enzyme activator complex is a
FAL1-SGD1 complex is a
FAR/SIN/STRIPAK complex is a
fatty acid beta-oxidation multienzyme complex is a28 BRENDA localization in branch, click for list of all
ferritin complex is a27 BRENDA localization in branch, click for list of all
formyl-methanofuran dehydrogenase (molybdenum enzyme) complex is a
formyl-methanofuran dehydrogenase (tungsten enzyme) complex is a
GAIT complex is a
GATOR1 complex is a
GATOR2 complex is a
glycoprotein complex is a26 BRENDA localization in branch, click for list of all
growth factor complex is a25 BRENDA localization in branch, click for list of all
Gtr1-Gtr2 GTPase complex is a
haptoglobin-hemoglobin complex is a24 BRENDA localization in branch, click for list of all
hemidesmosome associated protein complex is a
HICS complex is a
HIR complex is a
IKKalpha-IKKalpha complex is a
immunoglobulin complex is a23 BRENDA localization in branch, click for list of all
interferon regulatory factor complex is a
intraciliary transport particle is a
IRE1-RACK1-PP2A complex is a
Kelch-containing formin regulatory complex is a
KICSTOR complex is a
large latent transforming growth factor-beta complex is a
lymphotoxin complex is a
MAD1 complex is a
MAML1-RBP-Jkappa- ICN1 complex is a
MCM complex is a22 BRENDA localization in branch, click for list of all
MCM core complex is a
Mcs4 RR-MAPKKK complex is a
membrane fusion priming complex is a
metallochaperone complex is a
methyl accepting chemotaxis protein complex is a
methyl-tetrahydromethanopterin:coenzyme M methyltransferase complex is a
mitochondrial iron-sulfur cluster assembly complex is a
molybdopterin synthase complex is a
mRNA editing complex is a21 BRENDA localization in branch, click for list of all
MWP complex is a
NHE3/E3KARP/ACTN4 complex is a
Nicalin-NOMO complex is a
nitrite reductase complex [NAD(P)H] is a
NOS2-CD74 complex is a
Nrd1 complex is a
Nsk1-Dlc1 complex is a
nuclear exosome targeting complex is a
nucleotide-excision repair, DNA damage recognition complex is a
NVT complex is a
ornithine carbamoyltransferase inhibitor complex is a
PCSK9-AnxA2 complex is a
PCSK9-LDLR complex is a
peptidase inhibitor complex is a
protease inhibitor complex is a20 BRENDA localization in branch, click for list of all
PET complex is a
Pex17p-Pex14p docking complex is a
polycystin complex is a
prefoldin complex is a
protein complex involved in cell adhesion is a
protein phosphatase inhibitor complex is a
protein-carbohydrate complex is a
protein-DNA complex is a19 BRENDA localization in branch, click for list of all
DNA recombinase complex is a
enhanceosome is a1 BRENDA localization in branch, click for list of all
nucleotide-excision repair, preincision complex is a
pre-replicative complex is a
protein-DNA ISRE complex is a
retroviral intasome is a
SeqA-DNA complex is a
transcription preinitiation complex is a16 BRENDA localization in branch, click for list of all
protein-DNA-RNA complex is a
transcription ternary complex is a15 BRENDA localization in branch, click for list of all
protein-lipid complex is a14 BRENDA localization in branch, click for list of all
lipid tube is a
lipoprotein particle is a13 BRENDA localization in branch, click for list of all
protein-lipid-RNA complex is a
Prp19 complex is a12 BRENDA localization in branch, click for list of all
pyrophosphate-dependent phosphofructokinase complex is a
pyroptosome complex is a
R2TP complex is a11 BRENDA localization in branch, click for list of all
receptor complex is a10 BRENDA localization in branch, click for list of all
ANPR-A receptor complex is a
decoy receptor complex is a
ecdysone receptor holocomplex is a
GABA receptor complex is a
growth hormone receptor complex is a
interleukin-10 receptor complex is a
interleukin-15 receptor complex is a
interleukin-7 receptor complex is a
macrophage migration inhibitory factor receptor complex is a
nodal receptor complex is a
semaphorin receptor complex is a
serotonin receptor complex is a
taste receptor complex is a
tumor necrosis factor receptor superfamily complex is a
ribonucleoprotein complex is a8 BRENDA localization in branch, click for list of all
messenger ribonucleoprotein complex is a1 BRENDA localization in branch, click for list of all
polysome is a
pre-snoRNP complex is a
preribosome is a
RNAi effector complex is a
small nucleolar ribonucleoprotein complex is a
Rix1 complex is a
RNA cap binding complex is a
RPAP3/R2TP/prefoldin-like complex is a
RQC complex is a
Rvs161p-Rvs167p complex is a
S100A8 complex is a
Seh1-associated complex is a
SLAC complex is a
Sm-like protein family complex is a
Lsm1-7-Pat1 complex is a
Lsm2-8 complex is a5 BRENDA localization in branch, click for list of all
sperm individualization complex is a
Ste12p-Dig1p-Dig2p complex is a
sumoylated E2 ligase complex is a
TAM protein secretion complex is a
TBK1-IKKE-DDX3 complex is a
Tec1p-Ste12p-Dig1p complex is a
TRAF2-GSTP1 complex is a
trans-synaptic protein complex is a
transcription regulator complex is a
RNA polymerase II transcription regulator complex is a
RNA polymerase III transcription regulator complex is a
RNA polymerase IV transcription regulator complex is a
RNA polymerase V transcription regulator complex is a
sigma factor antagonist complex is a
snRNA-activating protein complex is a
transcription repressor complex is a
RNA polymerase I transcription repressor complex is a
RNA polymerase II transcription repressor complex is a
DRM complex is a
Mad-Max complex is a
Mad-Max-mSin3A complex is a
Mad-Max-mSin3B complex is a
negative cofactor 2 complex is a
Tle3-Aes complex is a
RNA polymerase III transcription repressor complex is a
RNA polymerase IV transcription repressor complex is a
RNA polymerase V transcription repressor complex is a
toxin-antitoxin complex is a
transforming growth factor beta activated kinase 1 complex is a
translation repressor complex is a
transporter complex is a2 BRENDA localization in branch, click for list of all
TTT complex is a
tubulin folding cofactor complex is a
tubulobulbar complex is a
type I protein secretion system complex is a
type II protein secretion system complex is a
type III protein secretion system complex is a
type IV secretion system complex is a1 BRENDA localization in branch, click for list of all
type V protein secretion system complex is a
type VI protein secretion system complex is a
ubiquinone biosynthesis complex is a
Ubp3-Bre5 deubiquitination complex is a
USH2 complex is a
vesicle tethering complex is a
viral portal complex is a
viral scaffold is a
viral terminase complex is a
viral transcriptional complex is a
Vma12-Vma22 assembly complex is a
VRK3/VHR/ERK complex is a
virion is a9 BRENDA localization in branch, click for list of all
structural constituent of virion
virion part part of
capsomere is a8 BRENDA localization in branch, click for list of all
icosahedral viral capsid, collar is a
icosahedral viral capsid, neck is a
icosahedral viral capsid, spike is a
viral capsid is a7 BRENDA localization in branch, click for list of all
helical viral capsid is a
icosahedral viral capsid is a
T=1 icosahedral viral capsid is a
T=13 icosahedral viral capsid is a
T=147 icosahedral capsid is a
T=16 icosahedral viral capsid is a
T=169 icosahedral viral capsid is a
T=2 icosahedral viral capsid is a
T=219 icosahedral capsid is a
T=25 icosahedral viral capsid is a
T=3 icosahedral viral capsid is a
T=4 icosahedral viral capsid is a
T=7 icosahedral viral capsid is a
T=pseudo3 icosahedral viral capsid is a
viral capsid, turret part of
viral inner capsid part of
viral intermediate capsid part of
viral outer capsid part of
viral capsid, decoration part of
viral nucleocapsid part of4 BRENDA localization in branch, click for list of all
viral capsid, internal space is a
viral membrane is a3 BRENDA localization in branch, click for list of all
viral envelope is a
viral inner membrane is a
viral procapsid is a1 BRENDA localization in branch, click for list of all
viral tegument is a
virus tail is a
molecular_function is a