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Literature summary extracted from

  • Tocchini-Valentini, G.D.; Fruscoloni, P.; Tocchini-Valentini, G.P.
    Evolution of introns in the archaeal world (2011), Proc. Natl. Acad. Sci. USA, 108, 4782-4787.
    View publication on PubMedView publication on EuropePMC

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4.6.1.16 pretRNA Schizosaccharomyces pombe
-
a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?
4.6.1.16 pretRNA Archaeoglobus fulgidus
-
a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?
4.6.1.16 pretRNA Methanocaldococcus jannaschii
-
a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?
4.6.1.16 pretRNA Saccharolobus solfataricus
-
a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?
4.6.1.16 pretRNA Saccharolobus solfataricus 98/2
-
a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?

Organism

EC Number Organism UniProt Comment Textmining
4.6.1.16 Archaeoglobus fulgidus O29362
-
-
4.6.1.16 Methanocaldococcus jannaschii Q58819
-
-
4.6.1.16 Saccharolobus solfataricus D0KSD0
-
-
4.6.1.16 Saccharolobus solfataricus 98/2 D0KSD0
-
-
4.6.1.16 Schizosaccharomyces pombe
-
-
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.6.1.16 additional information the enzyme recognizes a bulge-helix-bulge motif Schizosaccharomyces pombe ?
-
?
4.6.1.16 additional information the enzyme recognizes a bulge-helix-bulge motif Archaeoglobus fulgidus ?
-
?
4.6.1.16 additional information the enzyme recognizes a bulge-helix-bulge motif Methanocaldococcus jannaschii ?
-
?
4.6.1.16 additional information the enzyme recognizes a bulge-helix-bulge motif Saccharolobus solfataricus ?
-
?
4.6.1.16 additional information the enzyme recognizes a bulge-helix-bulge motif Saccharolobus solfataricus 98/2 ?
-
?
4.6.1.16 pretRNA
-
Schizosaccharomyces pombe a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?
4.6.1.16 pretRNA
-
Archaeoglobus fulgidus a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?
4.6.1.16 pretRNA
-
Methanocaldococcus jannaschii a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?
4.6.1.16 pretRNA
-
Saccharolobus solfataricus a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?
4.6.1.16 pretRNA
-
Saccharolobus solfataricus 98/2 a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
?

Subunits

EC Number Subunits Comment Organism
4.6.1.16 heterodimer
-
Saccharolobus solfataricus
4.6.1.16 heterotetramer
-
Schizosaccharomyces pombe
4.6.1.16 homodimer
-
Archaeoglobus fulgidus
4.6.1.16 homotetramer
-
Methanocaldococcus jannaschii

Synonyms

EC Number Synonyms Comment Organism
4.6.1.16 AF_0900 locus name Archaeoglobus fulgidus
4.6.1.16 EndA
-
Schizosaccharomyces pombe
4.6.1.16 EndA
-
Archaeoglobus fulgidus
4.6.1.16 EndA
-
Methanocaldococcus jannaschii
4.6.1.16 EndA
-
Saccharolobus solfataricus
4.6.1.16 MJ1424 locus name Methanocaldococcus jannaschii
4.6.1.16 pre-tRNA splicing endonuclease
-
Schizosaccharomyces pombe
4.6.1.16 pre-tRNA splicing endonuclease
-
Archaeoglobus fulgidus
4.6.1.16 pre-tRNA splicing endonuclease
-
Methanocaldococcus jannaschii
4.6.1.16 pre-tRNA splicing endonuclease
-
Saccharolobus solfataricus
4.6.1.16 ssol_1416 locus name Saccharolobus solfataricus