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Literature summary extracted from

  • Bleeker, P.M.; Spyropoulou, E.A.; Diergaarde, P.J.; Volpin, H.; De Both, M.T.; Zerbe, P.; Bohlmann, J.; Falara, V.; Matsuba, Y.; Pichersky, E.; Haring, M.A.; Schuurink, R.C.
    RNA-seq discovery, functional characterization, and comparison of sesquiterpene synthases from Solanum lycopersicum and Solanum habrochaites trichomes (2011), Plant Mol. Biol., 77, 323-336.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

EC Number Cloned (Comment) Organism
4.2.3.88 expressed in Escherichia coli Solanum lycopersicum
4.2.3.88 expressed in Escherichia coli Solanum habrochaites

Organism

EC Number Organism UniProt Comment Textmining
4.2.3.88 Solanum habrochaites
-
 Solanum habrochaites subsp. trichomes
-
4.2.3.88 Solanum habrochaites PI127826
-
 Solanum habrochaites subsp. trichomes
-
4.2.3.88 Solanum lycopersicum
-
 cultivar Moneymaker
-
4.2.3.104 Solanum habrochaites G8H5M8
-
-

Source Tissue

EC Number Source Tissue Comment Organism Textmining
4.2.3.88 flower
-
 Solanum lycopersicum
-
4.2.3.88 flower
-
 Solanum habrochaites
-
4.2.3.88 fruit
-
 Solanum lycopersicum
-
4.2.3.88 fruit
-
 Solanum habrochaites
-
4.2.3.88 leaf high expression Solanum lycopersicum
-
4.2.3.88 leaf high expression Solanum habrochaites
-
4.2.3.88 additional information not expressed in bald stems Solanum lycopersicum
-
4.2.3.88 additional information not expressed in bald stems Solanum habrochaites
-
4.2.3.88 root
-
 Solanum lycopersicum
-
4.2.3.88 root
-
 Solanum habrochaites
-
4.2.3.88 stem
-
 Solanum lycopersicum
-
4.2.3.88 stem
-
 Solanum habrochaites
-
4.2.3.88 trichome stem trichome, highest expression Solanum lycopersicum
-
4.2.3.88 trichome stem trichome, highest expression Solanum habrochaites
-
4.2.3.104 trichome
-
 Solanum habrochaites
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.2.3.88 (E,E)-farnesyl diphosphate
-
 Solanum lycopersicum viridiflorene + diphosphate viridiflorene is the major product ?
4.2.3.88 (E,E)-farnesyl diphosphate
-
 Solanum habrochaites viridiflorene + diphosphate viridiflorene is the major product ?
4.2.3.88 (E,E)-farnesyl diphosphate
-
 Solanum habrochaites PI127826 viridiflorene + diphosphate viridiflorene is the major product ?
4.2.3.104 (2E,6E)-farnesyl diphosphate
-
 Solanum habrochaites alpha-humulene + diphosphate the main product is alpha-humulene, second product is beta-caryophyllene ?

Synonyms

EC Number Synonyms Comment Organism
4.2.3.88 TPS31
-
 Solanum lycopersicum
4.2.3.88 TPS31
-
 Solanum habrochaites
4.2.3.104 beta-caryophyllene/alpha-humulene synthase
-
 Solanum habrochaites
4.2.3.104 CAHS
-
 Solanum habrochaites
4.2.3.104 TPS12
-
 Solanum habrochaites

Expression

EC Number Organism Comment Expression
4.2.3.88 Solanum lycopersicum the enzyme expression is induced 3fold by jasmonic acid treatment up
4.2.3.88 Solanum habrochaites the enzyme expression is induced 3fold by jasmonic acid treatment up