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Literature summary extracted from

  • Buchan, A.; Neidle, E.L.; Moran, M.A.
    Diverse organization of genes of the beta-ketoadipate pathway in members of the marine Roseobacter lineage (2004), Appl. Environ. Microbiol., 70, 1658-1668.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

EC Number Cloned (Comment) Organism
1.13.11.3 expressed in Escherichia coli Roseovarius nubinhibens ISM
4.1.1.44 expressed in Escherichia coli Sulfitobacter pontiacus
4.1.1.44 expressed in Escherichia coli Roseovarius nubinhibens ISM

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
1.13.11.3 protocatechuate + O2 Ruegeria pomeroyi
-
beta-carboxy-cis-cis-muconate
-
?
1.13.11.3 protocatechuate + O2 Sulfitobacter sp.
-
beta-carboxy-cis-cis-muconate
-
?
1.13.11.3 protocatechuate + O2 Roseovarius nubinhibens ISM
-
beta-carboxy-cis-cis-muconate
-
?
1.13.11.3 protocatechuate + O2 Sagittula stellata E-37
-
beta-carboxy-cis-cis-muconate
-
?
4.1.1.44 4-carboxymuconolactone Sulfitobacter pontiacus
-
5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone Ruegeria pomeroyi
-
5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone Roseovarius nubinhibens ISM
-
5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone Sulfitobacter sp.
-
5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone Sagittula stellata E-37
-
5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone Sulfitobacter pontiacus ChLG 10
-
5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?

Organism

EC Number Organism UniProt Comment Textmining
1.13.11.3 Roseovarius nubinhibens ISM
-
-
-
1.13.11.3 Ruegeria pomeroyi
-
-
-
1.13.11.3 Sagittula stellata E-37
-
-
-
1.13.11.3 Sulfitobacter sp.
-
and strains Y3F, Y4I
-
4.1.1.44 Roseovarius nubinhibens ISM Q6SJC5
-
-
4.1.1.44 Ruegeria pomeroyi Q6SJB9
-
-
4.1.1.44 Sagittula stellata E-37 Q9L5B1
-
-
4.1.1.44 Sulfitobacter pontiacus
-
-
-
4.1.1.44 Sulfitobacter pontiacus ChLG 10
-
-
-
4.1.1.44 Sulfitobacter sp. Q6SJA7 and strains Y3F, Y4I
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.13.11.3 protocatechuate + O2
-
Ruegeria pomeroyi beta-carboxy-cis-cis-muconate
-
?
1.13.11.3 protocatechuate + O2
-
Sulfitobacter sp. beta-carboxy-cis-cis-muconate
-
?
1.13.11.3 protocatechuate + O2
-
Roseovarius nubinhibens ISM beta-carboxy-cis-cis-muconate
-
?
1.13.11.3 protocatechuate + O2
-
Sagittula stellata E-37 beta-carboxy-cis-cis-muconate
-
?
4.1.1.44 4-carboxymuconolactone
-
Sulfitobacter pontiacus 5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone
-
Ruegeria pomeroyi 5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone
-
Roseovarius nubinhibens ISM 5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone
-
Sulfitobacter sp. 5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone
-
Sagittula stellata E-37 5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?
4.1.1.44 4-carboxymuconolactone
-
Sulfitobacter pontiacus ChLG 10 5-oxo-4,5-dihydrofuran 2-acetate + CO2
-
?

Synonyms

EC Number Synonyms Comment Organism
1.13.11.3 P3,4DO
-
Ruegeria pomeroyi
1.13.11.3 P3,4DO
-
Sulfitobacter sp.
1.13.11.3 P3,4DO
-
Roseovarius nubinhibens ISM
1.13.11.3 P3,4DO
-
Sagittula stellata E-37
1.13.11.3 PcaHG
-
Ruegeria pomeroyi
1.13.11.3 PcaHG
-
Sulfitobacter sp.
1.13.11.3 PcaHG
-
Roseovarius nubinhibens ISM
1.13.11.3 PcaHG
-
Sagittula stellata E-37
1.13.11.3 protocatechuate 3,4-dioxygenase
-
Ruegeria pomeroyi
1.13.11.3 protocatechuate 3,4-dioxygenase
-
Sulfitobacter sp.
1.13.11.3 protocatechuate 3,4-dioxygenase
-
Roseovarius nubinhibens ISM
1.13.11.3 protocatechuate 3,4-dioxygenase
-
Sagittula stellata E-37
4.1.1.44 gamma-carboxymuconolactone decarboxylase
-
Sulfitobacter pontiacus
4.1.1.44 gamma-carboxymuconolactone decarboxylase
-
Ruegeria pomeroyi
4.1.1.44 gamma-carboxymuconolactone decarboxylase
-
Roseovarius nubinhibens ISM
4.1.1.44 gamma-carboxymuconolactone decarboxylase
-
Sulfitobacter sp.
4.1.1.44 gamma-carboxymuconolactone decarboxylase
-
Sagittula stellata E-37
4.1.1.44 PcaC
-
Sulfitobacter pontiacus
4.1.1.44 PcaC
-
Ruegeria pomeroyi
4.1.1.44 PcaC
-
Roseovarius nubinhibens ISM
4.1.1.44 PcaC
-
Sulfitobacter sp.
4.1.1.44 PcaC
-
Sagittula stellata E-37

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
1.13.11.3 7.5
-
assay at Roseovarius nubinhibens ISM
4.1.1.44 7.5
-
assay at Sulfitobacter pontiacus
4.1.1.44 7.5
-
assay at Roseovarius nubinhibens ISM