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Literature summary extracted from

  • Landete, J.M.; Arena, M.E.; Pardo, I.; Manca de Nadra, M.C.; Ferrer, S.
    Comparative survey of putrescine production from agmatine deamination in different bacteria (2008), Food Microbiol., 25, 882-887.
    View publication on PubMed

Activating Compound

EC Number Activating Compound Comment Organism Structure
3.5.3.12 histamine at concentration of 0.1 g/l about 2% more putrescine production, at concentration of 1 g/l about 5% more putrescine production Lentilactobacillus hilgardii
3.5.3.12 histamine at concentration of 0.1 g/l and 1.0 g/l about 10% more putrescine production Pseudomonas aeruginosa
3.5.3.12 additional information diverse polyamines and sugars increased putrescine production, e.g. succinic acid increases putrescine production, but does not alter agmatine deimination, overview Pseudomonas aeruginosa
3.5.3.12 spermidine at concentration of 0.1 g/l about 10% more putrescine production, at concentration of 1 g/l 32% more putrescine production Pseudomonas aeruginosa
3.5.3.12 spermine at concentration of 0.1 g/l about 2% more putrescine production, at concentration of 1 g/l 23% more putrescine production Pseudomonas aeruginosa
3.5.3.12 succinate at concentration of 0.1 g/l about 15% more putrescine production, at concentration of 1 g/l about 35% more putrescine production Pseudomonas aeruginosa
3.5.3.12 succinate at concentration of 1 g/l about 5% more putrescine production Bacillus cereus
3.5.3.12 tyramine at concentration of 0.1 g/l about 15% more putrescine production, at concentration of 1 g/l 20% more putrescine production Pseudomonas aeruginosa
3.5.3.12 tyramine at concentration of 1 g/l about 2% more putrescine production Lentilactobacillus hilgardii

Inhibitors

EC Number Inhibitors Comment Organism Structure
3.5.3.12 arginine highest inhibitory effect with 10 g/l arginine, up to 80% less putrescine production Bacillus cereus
3.5.3.12 arginine highest inhibitory effect with 10 g/l arginine, up to 83% less putrescine production Enterococcus faecalis
3.5.3.12 arginine highest inhibitory effect with 10 g/l arginine, up to 75% less putrescine production Lentilactobacillus hilgardii
3.5.3.12 arginine highest inhibitory effect with 10 g/l arginine, up to 68% less putrescine production Pseudomonas aeruginosa
3.5.3.12 fructose at concentration of 0.1 g/l about 18% less putrescine production, at concentration of 1 g/l about 60% less putrescine production Bacillus cereus
3.5.3.12 fructose at concentration of 0.1 g/l about 5% less putrescine production, at concentration of 1 g/l about 30% less putrescine production Enterococcus faecalis
3.5.3.12 fructose at concentration of 0.1 g/l about 5% less putrescine production, at concentration of 1 g/l about 75% less putrescine production Lentilactobacillus hilgardii
3.5.3.12 fructose at concentration of 0.1 g/l about 60% less putrescine production, at concentration of 1 g/l 70% less putrescine production Pseudomonas aeruginosa
3.5.3.12 glucose at concentration of 0.1 g/l about 22% less putrescine production, at concentration of 1 g/l about 70% less putrescine production Bacillus cereus
3.5.3.12 glucose at concentration of 0.1 g/l about 8% less putrescine production, at concentration of 1 g/l about 70% less putrescine production Enterococcus faecalis
3.5.3.12 glucose at concentration of 0.1 g/l about 16% less putrescine production, at concentration of 1 g/l about 73% less putrescine production Lentilactobacillus hilgardii
3.5.3.12 glucose at concentration of 0.1 g/l about 10% less putrescine production, at concentration of 1 g/l 19% less putrescine production Pseudomonas aeruginosa
3.5.3.12 spermidine at concentration of 0.1 g/l about 10% less putrescine production, at concentration of 1 g/l about 20% less putrescine production Bacillus cereus
3.5.3.12 spermidine at concentration of 0.1 g/l about 18% less putrescine production, at concentration of 1 g/l about 25% less putrescine production Enterococcus faecalis
3.5.3.12 spermidine at concentration of 0.1 g/l about 5% less putrescine production, at concentration of 1 g/l about 23% less putrescine production Lentilactobacillus hilgardii
3.5.3.12 spermine at concentration of 0.1 g/l about 10% less putrescine production, at concentration of 1 g/l about 20% less putrescine production Bacillus cereus
3.5.3.12 spermine at concentration of 0.1 g/l about 5% less putrescine production, at concentration of 1 g/l about 25% less putrescine production Enterococcus faecalis
3.5.3.12 spermine at concentration of 0.1 g/l about 20% less putrescine production, at concentration of 1 g/l about 25% less putrescine production Lentilactobacillus hilgardii
3.5.3.12 succinate at concentration of 0.1 g/l and 1 g/l only about 2% less putrescine production Lentilactobacillus hilgardii
3.5.3.12 tyramine at concentration of 0.1 g/l about 2% less putrescine production Lentilactobacillus hilgardii

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
3.5.3.12 agmatine + H2O Pseudomonas aeruginosa Pseudomonas aeruginosa is an organism with high putrescine production activity compared to other microorganisms, overview N-carbamoylputrescine + NH3
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
3.5.3.12 Bacillus cereus
-
-
-
3.5.3.12 Bacillus cereus CECT 148
-
-
-
3.5.3.12 Enterococcus faecalis
-
 strain ATCC11700
-
3.5.3.12 Enterococcus faecalis ATCC 11700
-
 strain ATCC11700
-
3.5.3.12 Lentilactobacillus hilgardii
-
-
-
3.5.3.12 Lentilactobacillus hilgardii X1B
-
-
-
3.5.3.12 Pseudomonas aeruginosa
-
-
-
3.5.3.12 Pseudomonas aeruginosa Q9I6J9 CECT 4122
-

Specific Activity [micromol/min/mg]

EC Number Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
3.5.3.12 additional information
-
-
 Pseudomonas aeruginosa

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.5.3.12 agmatine + H2O
-
 Pseudomonas aeruginosa N-carbamoylputrescine + NH3
-
 ?
3.5.3.12 agmatine + H2O Pseudomonas aeruginosa is an organism with high putrescine production activity compared to other microorganisms, overview Pseudomonas aeruginosa N-carbamoylputrescine + NH3
-
 ?
3.5.3.12 agmatine + H2O assay at pH 6.5, 28°C, 8 h Pseudomonas aeruginosa NH3 + N-carbamoylputrescine
-
 ir
3.5.3.12 agmatine + H2O assay at pH 6.5, 28°C, 8 h Enterococcus faecalis NH3 + N-carbamoylputrescine
-
 ir
3.5.3.12 agmatine + H2O assay at pH 6.5, 28°C, 8 h Bacillus cereus NH3 + N-carbamoylputrescine
-
 ir
3.5.3.12 agmatine + H2O assay at pH 6.5, 28°C, 8 h Lentilactobacillus hilgardii NH3 + N-carbamoylputrescine
-
 ir
3.5.3.12 agmatine + H2O assay at pH 6.5, 28°C, 8 h Bacillus cereus CECT 148 NH3 + N-carbamoylputrescine
-
 ir
3.5.3.12 agmatine + H2O assay at pH 6.5, 28°C, 8 h Enterococcus faecalis ATCC 11700 NH3 + N-carbamoylputrescine
-
 ir
3.5.3.12 agmatine + H2O assay at pH 6.5, 28°C, 8 h Lentilactobacillus hilgardii X1B NH3 + N-carbamoylputrescine
-
 ir

Synonyms

EC Number Synonyms Comment Organism
3.5.3.12 agmatine deiminase
-
 Pseudomonas aeruginosa
3.5.3.12 agmatine deiminase
-
 Enterococcus faecalis
3.5.3.12 agmatine deiminase
-
 Bacillus cereus
3.5.3.12 agmatine deiminase
-
 Lentilactobacillus hilgardii

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
3.5.3.12 28
-
 assay at Pseudomonas aeruginosa
3.5.3.12 28
-
 assay at Enterococcus faecalis
3.5.3.12 28
-
 assay at Bacillus cereus
3.5.3.12 28
-
 assay at Lentilactobacillus hilgardii
3.5.3.12 28
-
 in vivo assay at Pseudomonas aeruginosa

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
3.5.3.12 6.5
-
 assay at Pseudomonas aeruginosa
3.5.3.12 6.5
-
 assay at Enterococcus faecalis
3.5.3.12 6.5
-
 assay at Bacillus cereus
3.5.3.12 6.5
-
 assay at Lentilactobacillus hilgardii
3.5.3.12 6.5
-
 in vivo assay at Pseudomonas aeruginosa