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Literature summary extracted from

  • Axelrod, H.L.; McMullan, D.; Krishna, S.S.; Miller, M.D.; Elsliger, M.; Abdubek, P.; Ambing, E.; Astakhova, T.; Carlton, D.; Chiu, H.; Clayton, T.; Duan, L.; Feuerhelm, J.; Grzechnik, S.K.; Hale, J.; Han, G.W.; Haugen, J.; Jaroszewski, L.; Jin, K.K.; Klock, H.E.; Knuth, M.W.; Koesema, E.; Morse, A.T.; Nigoghossian, E.; Okach, L.; Oommachen, S.; Paulsen, J.; Quijano, K.; Reyes, R.; Rife, C.L.; van den Bedem, H.; Weekes, D.; White, A.; Wolf, G.; Xu, Q.; Hodgson, K.O.; Wooley, J.; Deacon. A.M.; Godzik, A.; Lesley, S.A.; Wilson, I.A.
    Crystal structure of AICAR transformylase IMP cyclohydrolase (TM1249) from Thermotoga maritima at 1.88 ANG. resolution (2008), Proteins Struct. Funct. Bioinform., 71, 1042-1049.
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
2.1.2.3 into the plasmid pMH4 for expression in the Escherichia coli strain GeneHogs Thermotoga maritima
3.5.4.10 expression of His-tagged enzyme in Escherichia coli Thermotoga maritima

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
2.1.2.3 the three-dimensional structure of TM1249 is determined to 1.88 A resolution by molecular replacement Thermotoga maritima
3.5.4.10 20 mg/ml purified recombinant enzyme in 20 mM Tris, pH 7.9, 150 mM NaCl, 0.25 mM TCEP, nanodroplet vapor diffusion method, the crystallization solution contains 20% w/v PEG 6000 and 0.1 M citrate pH 5.0, 10% v/v PEG 200 as a cryoprotectant, X-ray diffraction structure determination and anaylsis at 1.88 A resolution, modelling Thermotoga maritima

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
2.1.2.3 K+ the refined structure includes two K+ ions in the asymmetric unit Thermotoga maritima

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
2.1.2.3 49700
-
monomer, residues 1-452 Thermotoga maritima
3.5.4.10 49700
-
1 * 49700, enzyme comprising residues 1-452, i.e. the IMP cyclohydrolase part of the bifunctional enzyme, SDS-PAGE Thermotoga maritima

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
2.1.2.3 10-formyltetrahydrofolate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide Thermotoga maritima
-
tetrahydrofolate + 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
-
?
3.5.4.10 additional information Thermotoga maritima the TM1249 gene or gene purH of Thermotoga maritima encodes a bifunctional enzyme with 5-aminoimidazole-4-carboxamide ribonucleotide transformylase, AICAR Tfase, EC 2.1.2.3, and inosine 5'-monophosphate cyclohydrolase, IMPCH, EC 3.5.4.10, activities. These activities represent the final two steps of the de novo purine biosynthesis pathway, overview ?
-
?

Organism

EC Number Organism UniProt Comment Textmining
2.1.2.3 Thermotoga maritima
-
-
-
3.5.4.10 Thermotoga maritima Q9X0X6 gene TM1249 or purH
-

Purification (Commentary)

EC Number Purification (Comment) Organism
2.1.2.3 using a nickel-chelating resin and a Resource Q column Thermotoga maritima
3.5.4.10 recombinant His-tagged enzyme from Escherichia coli by nickel affinity and anion exchange chromatography Thermotoga maritima

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
2.1.2.3 10-formyltetrahydrofolate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
-
Thermotoga maritima tetrahydrofolate + 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
-
?
3.5.4.10 5-formaminoimidazole-4-carboxamide ribonucleotide the IMPCH domain catalyzes the intramolecular cyclization of 5-formyl-AICAR, FAICAR, to IMP Thermotoga maritima IMP + H2O
-
?
3.5.4.10 additional information the TM1249 gene or gene purH of Thermotoga maritima encodes a bifunctional enzyme with 5-aminoimidazole-4-carboxamide ribonucleotide transformylase, AICAR Tfase, EC 2.1.2.3, and inosine 5'-monophosphate cyclohydrolase, IMPCH, EC 3.5.4.10, activities. These activities represent the final two steps of the de novo purine biosynthesis pathway, overview Thermotoga maritima ?
-
?

Subunits

EC Number Subunits Comment Organism
2.1.2.3 dimer
-
Thermotoga maritima
3.5.4.10 monomer 1 * 49700, enzyme comprising residues 1-452, i.e. the IMP cyclohydrolase part of the bifunctional enzyme, SDS-PAGE Thermotoga maritima

Synonyms

EC Number Synonyms Comment Organism
2.1.2.3 5-aminoimidazole-4-carboxamide ribonucleotide transformylase
-
Thermotoga maritima
2.1.2.3 AICAR TFase
-
Thermotoga maritima
2.1.2.3 AICAR transformylase
-
Thermotoga maritima
2.1.2.3 PurH
-
Thermotoga maritima
2.1.2.3 TM1249
-
Thermotoga maritima
3.5.4.10 AICAR transformylase/inosine 5'-monophosphate cyclohydrolase
-
Thermotoga maritima
3.5.4.10 IMPCH
-
Thermotoga maritima
3.5.4.10 inosine 5'-monophosphate cyclohydrolase
-
Thermotoga maritima

Cofactor

EC Number Cofactor Comment Organism Structure
2.1.2.3 10-formyltetrahydrofolate
-
Thermotoga maritima

pI Value

EC Number Organism Comment pI Value Maximum pI Value
2.1.2.3 Thermotoga maritima calculated isoelectric point
-
5.49
3.5.4.10 Thermotoga maritima sequence calculation
-
5.49