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Literature summary extracted from

  • Ament, K.; Van Schie, C.C.; Bouwmeester, H.J.; Haring, M.A.; Schuurink, R.C.
    Induction of a leaf specific geranylgeranyl pyrophosphate synthase and emission of (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene in tomato are dependent on both jasmonic acid and salicylic acid signaling pathways (2006), Planta, 224, 1197-1208.
    View publication on PubMed

Activating Compound

EC Number Activating Compound Comment Organism Structure
2.5.1.29 additional information isozyme GGPS1 expression is induced in leaves by spider mite Tetranychus urticae feeding and mechanical wounding in wild type tomato but not in the jasmonic acid-response mutant def-1 and the salicylic acid-deficient transgenic NahG line, overview Solanum lycopersicum
2.5.1.29 additional information isozyme GGPS2 is not induced in leaves by spider mite-feeding, wounding, jasmonic acid or methyl salicylate, overview Solanum lycopersicum

Cloned(Commentary)

EC Number Cloned (Comment) Organism
2.5.1.29 gene GGPS1, DNA and amino acid sequence determination and analysis, expression analysis, phylogenetic analysis Solanum lycopersicum
2.5.1.29 gene GGPS2, DNA and amino acid sequence determination and analysis, expression analysis, phylogenetic analysis Solanum lycopersicum

Protein Variants

EC Number Protein Variants Comment Organism
2.5.1.29 additional information isozyme GGPS1 expression is induced in leaves by spider mite Tetranychus urticae feeding and mechanical wounding in wild type tomato but not in the jasmonic acid-response mutant def-1 and the salicylic acid-deficient transgenic NahG line, isozyme GGPS2 is not induced in leaves by spider mite-feeding, wounding, jasmonic acid or methyl salicylate, overview Solanum lycopersicum
2.5.1.29 additional information isozyme GGPS1 expression is induced in leaves by spider mite Tetranychus urticae feeding and mechanical wounding in wild type tomato but not in the jasmonic acid-response mutant def-1 and the salicylic acid-deficient transgenic NahG line, overview Solanum lycopersicum

Localization

EC Number Localization Comment Organism GeneOntology No. Textmining
2.5.1.29 chloroplast
-
 Solanum lycopersicum 9507
-

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
2.5.1.29 Mg2+
-
 Solanum lycopersicum

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
2.5.1.29 39000
-
 x * 39000, about, isozyme GGPPS2, sequence calculation Solanum lycopersicum
2.5.1.29 39900
-
 x * 39900, about, isozyme GGPPS1, sequence calculation Solanum lycopersicum

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
2.5.1.29 additional information Solanum lycopersicum emission of the GGPP-derived volatile terpenoid (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene correlates with expression of GGPS1 ?
-
 ?
2.5.1.29 trans,trans-farnesyl diphosphate + isopentenyl diphosphate Solanum lycopersicum
-
 diphosphate + geranylgeranyl diphosphate
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
2.5.1.29 Solanum lycopersicum Q1A7S9 GGPPS2; cv. Castlemart, genes/isozymes GGPS1 and GGPS2
-
2.5.1.29 Solanum lycopersicum Q1A7T0 GGPPS1; cv. Castlemart, genes/isozymes GGPS1 and GGPS2
-

Source Tissue

EC Number Source Tissue Comment Organism Textmining
2.5.1.29 flower predominantly isozyme GGPS2 Solanum lycopersicum
-
2.5.1.29 fruit ripening, predominantly isozyme GGPS2 Solanum lycopersicum
-
2.5.1.29 leaf predominantly isozyme GGPS1 Solanum lycopersicum
-

Specific Activity [micromol/min/mg]

EC Number Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
2.5.1.29 additional information
-
-
 Solanum lycopersicum

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
2.5.1.29 additional information emission of the GGPP-derived volatile terpenoid (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene correlates with expression of GGPS1 Solanum lycopersicum ?
-
 ?
2.5.1.29 trans,trans-farnesyl diphosphate + isopentenyl diphosphate
-
 Solanum lycopersicum diphosphate + geranylgeranyl diphosphate
-
 ?

Subunits

EC Number Subunits Comment Organism
2.5.1.29 ? x * 39000, about, isozyme GGPPS2, sequence calculation Solanum lycopersicum
2.5.1.29 ? x * 39900, about, isozyme GGPPS1, sequence calculation Solanum lycopersicum

Synonyms

EC Number Synonyms Comment Organism
2.5.1.29 GGPP synthase
-
 Solanum lycopersicum
2.5.1.29 leaf-specific geranylgeranyl pyrophosphate synthase
-
 Solanum lycopersicum
2.5.1.29 More the enzyme belongs to a group of short-chain prenyltransferases Solanum lycopersicum

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
2.5.1.29 30
-
 assay at Solanum lycopersicum

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
2.5.1.29 8
-
 assay at Solanum lycopersicum