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Literature summary extracted from

  • Hudson, A.O.; Bless, C.; Macedo, P.; Chatterjee, S.P.; Singh, B.K.; Gilvarg, C.; Leustek, T.
    Biosynthesis of lysine in plants: evidence for a variant of the known bacterial pathways (2005), Biochim. Biophys. Acta, 1721, 27-36.
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
3.5.1.47 gene dapE, DNA determination and analysis, expression in Escherichia coli Arabidopsis thaliana

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O Chlamydomonas reinhardtii step in the diaminopimelic acid/lysine pathway, overview acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O Zea mays step in the diaminopimelic acid/lysine pathway, overview acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O Nicotiana tabacum step in the diaminopimelic acid/lysine pathway, overview acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O Glycine max step in the diaminopimelic acid/lysine pathway, overview acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O Arabidopsis thaliana step in the diaminopimelic acid/lysine pathway, overview acetate + LL-2,6-diaminoheptanedioate
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
3.5.1.47 Arabidopsis thaliana
-
 gene dapE
-
3.5.1.47 Chlamydomonas reinhardtii
-
-
-
3.5.1.47 Glycine max
-
-
-
3.5.1.47 Nicotiana tabacum
-
-
-
3.5.1.47 Zea mays
-
-
-

Specific Activity [micromol/min/mg]

EC Number Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
3.5.1.47 0.00001
-
 activity in cell extract Chlamydomonas reinhardtii
3.5.1.47 0.00001
-
 activity in cell extract Nicotiana tabacum
3.5.1.47 0.00001
-
 activity in cell extract Glycine max
3.5.1.47 0.00003
-
 activity in cell extract Zea mays

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O
-
 Chlamydomonas reinhardtii acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O
-
 Zea mays acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O
-
 Nicotiana tabacum acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O
-
 Glycine max acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O
-
 Arabidopsis thaliana acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O step in the diaminopimelic acid/lysine pathway, overview Chlamydomonas reinhardtii acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O step in the diaminopimelic acid/lysine pathway, overview Zea mays acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O step in the diaminopimelic acid/lysine pathway, overview Nicotiana tabacum acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O step in the diaminopimelic acid/lysine pathway, overview Glycine max acetate + LL-2,6-diaminoheptanedioate
-
 ?
3.5.1.47 N-acetyl-LL-2,6-diaminoheptanedioate + H2O step in the diaminopimelic acid/lysine pathway, overview Arabidopsis thaliana acetate + LL-2,6-diaminoheptanedioate
-
 ?

Synonyms

EC Number Synonyms Comment Organism
3.5.1.47 DapE
-
 Chlamydomonas reinhardtii
3.5.1.47 DapE
-
 Zea mays
3.5.1.47 DapE
-
 Nicotiana tabacum
3.5.1.47 DapE
-
 Glycine max
3.5.1.47 DapE
-
 Arabidopsis thaliana
3.5.1.47 N-alpha-acyl-L,L-diaminopimelate deacylase
-
 Chlamydomonas reinhardtii
3.5.1.47 N-alpha-acyl-L,L-diaminopimelate deacylase
-
 Zea mays
3.5.1.47 N-alpha-acyl-L,L-diaminopimelate deacylase
-
 Nicotiana tabacum
3.5.1.47 N-alpha-acyl-L,L-diaminopimelate deacylase
-
 Glycine max
3.5.1.47 N-alpha-acyl-L,L-diaminopimelate deacylase
-
 Arabidopsis thaliana

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
3.5.1.47 30
-
 assay at Chlamydomonas reinhardtii
3.5.1.47 30
-
 assay at Zea mays
3.5.1.47 30
-
 assay at Nicotiana tabacum
3.5.1.47 30
-
 assay at Glycine max
3.5.1.47 30
-
 assay at Arabidopsis thaliana

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
3.5.1.47 7.6
-
 assay at Chlamydomonas reinhardtii
3.5.1.47 7.6
-
 assay at Zea mays
3.5.1.47 7.6
-
 assay at Nicotiana tabacum
3.5.1.47 7.6
-
 assay at Glycine max
3.5.1.47 7.6
-
 assay at Arabidopsis thaliana