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Literature summary extracted from
- Recombinant RNase Z does not recognize CCA as part of the tRNA and its cleavage efficiency is influenced by acceptor stem length (2003), Biol. Chem., 384, 333-342.
Cloned(Commentary)
| EC Number | Cloned (Comment) | Organism |
|---|---|---|
| 3.1.26.11 | expression in Escherichia coli | Arabidopsis thaliana |
| 3.1.26.11 | expression in Escherichia coli | Methanocaldococcus jannaschii |
Localization
| EC Number | Localization | Comment | Organism | GeneOntology No. | Textmining |
|---|---|---|---|---|---|
| 3.1.26.11 | cytosol | - |
Triticum aestivum | 5829 | - |
Organism
| EC Number | Organism | UniProt | Comment | Textmining |
|---|---|---|---|---|
| 3.1.26.11 | Arabidopsis thaliana | - |
- |
- |
| 3.1.26.11 | Methanocaldococcus jannaschii | - |
- |
- |
| 3.1.26.11 | Triticum aestivum | - |
- |
- |
Substrates and Products (Substrate)
| EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|---|
| 3.1.26.11 | IM0 + H2O | pre-tRNAIle with CCA 3'-trailer sequence | Triticum aestivum | ? | - |
? |  |
| 3.1.26.11 | IM0 + H2O | pre-tRNAIle with CCA 3'-trailer sequence | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | IM0 + H2O | pre-tRNAIle with CCA 3'-trailer sequence | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | IM1 + H2O | pre-tRNAIle with CCG 3'-trailer sequence | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | IM1 + H2O | pre-tRNAIle with CCG 3'-trailer sequence | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | IM1 + H2O | pre-tRNAIle with CCG 3'-trailer sequence | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | IM2 + H2O | pre-tRNAIle with CUG 3'-trailer sequence | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | IM2 + H2O | pre-tRNAIle with CUG 3'-trailer sequence | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | IM2 + H2O | pre-tRNAIle with CUG 3'-trailer sequence | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | IM3 + H2O | pre-tRNAIle with UUG 3'-trailer sequence | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | IM3 + H2O | pre-tRNAIle with UUG 3'-trailer sequence | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | IM3 + H2O | pre-tRNAIle with UUG 3'-trailer sequence | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | IT1 + H2O | pre-tRNAIle with CCG and 50 nucleotide 3'-trailer sequence | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | IT1 + H2O | pre-tRNAIle with CCG and 50 nucleotide 3'-trailer sequence | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | IT1 + H2O | pre-tRNAIle with CCG and 50 nucleotide 3'-trailer sequence | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | IT2 + H2O | pre-tRNAIle with CUG and 50 nucleotide 3'-trailer sequence | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | IT2 + H2O | pre-tRNAIle with CUG and 50 nucleotide 3'-trailer sequence | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | IT2 + H2O | pre-tRNAIle with CUG and 50 nucleotide 3'-trailer sequence | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | IT3 + H2O | pre-tRNAIle with UUG and 50 nucleotide 3'-trailer sequence | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | IT3 + H2O | pre-tRNAIle with UUG and 50 nucleotide 3'-trailer sequence | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | IT3 + H2O | pre-tRNAIle with UUG and 50 nucleotide 3'-trailer sequence | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | ITO + H2O | pre-tRNAIle with CCA and 50 nucleotide 3'-trailer sequence | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | ITO + H2O | pre-tRNAIle with CCA and 50 nucleotide 3'-trailer sequence | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | ITO + H2O | pre-tRNAIle with CCA and 50 nucleotide 3'-trailer sequence | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | S5L + H2O | pre-tRNATyr construct with 5 base pairs in the acceptor stem | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | S5L + H2O | pre-tRNATyr construct with 5 base pairs in the acceptor stem | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | S5L + H2O | pre-tRNATyr construct with 5 base pairs in the acceptor stem | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | S6L + H2O | pre-tRNATyr construct with 6 base pairs in the acceptor stem | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | S6L + H2O | pre-tRNATyr construct with 6 base pairs in the acceptor stem | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | S6L + H2O | pre-tRNATyr construct with 6 base pairs in the acceptor stem | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | S7L + H2O | wild type pre-tRNAIle | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | S7L + H2O | wild type pre-tRNAIle | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | S7L + H2O | wild type pre-tRNAIle | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | S8L + H2O | pre-tRNATyr construct with 8 base pairs in the acceptor stem | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | S8L + H2O | pre-tRNATyr construct with 8 base pairs in the acceptor stem | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | S8L + H2O | pre-tRNATyr construct with 8 base pairs in the acceptor stem | Methanocaldococcus jannaschii | ? | - |
? | |
| 3.1.26.11 | S9L + H2O | pre-tRNATyr construct with 9 base pairs in the acceptor stem | Triticum aestivum | ? | - |
? | |
| 3.1.26.11 | S9L + H2O | pre-tRNATyr construct with 9 base pairs in the acceptor stem | Arabidopsis thaliana | ? | - |
? | |
| 3.1.26.11 | S9L + H2O | pre-tRNATyr construct with 9 base pairs in the acceptor stem | Methanocaldococcus jannaschii | ? | - |
? | |
Synonyms
| EC Number | Synonyms | Comment | Organism |
|---|---|---|---|
| 3.1.26.11 | RNaseZ | - |
Triticum aestivum |
| 3.1.26.11 | RNaseZ | - |
Arabidopsis thaliana |
| 3.1.26.11 | RNaseZ | - |
Methanocaldococcus jannaschii |
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Release 2023.1 (January 2023)
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