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Literature summary extracted from

  • Makela, M.; Galkin, S.; Hatakka, A.; Lundell, T.
    Production of organic acids and oxalate decarboxylase in lignin-degrading white rot fungi (2002), Enzyme Microb. Technol., 30, 542-549.
No PubMed abstract available

Activating Compound

EC Number Activating Compound Comment Organism Structure
4.1.1.2 additional information 6fold higher specific activity after induction by 5 mM oxalic acid, also some non-induced activity Dichomitus squalens
4.1.1.2 additional information induced by 5 mM oxalic acid Trametes versicolor
4.1.1.2 additional information induced by 5 mM oxalic acid Trametes ochracea
4.1.1.2 additional information induced by 5 mM oxalic acid Atheliachaete sanguinea

Localization

EC Number Localization Comment Organism GeneOntology No. Textmining
4.1.1.2 cytoplasm
-
 Dichomitus squalens 5737
-
4.1.1.2 intracellular
-
 Trametes versicolor 5622
-
4.1.1.2 intracellular
-
 Trametes ochracea 5622
-
4.1.1.2 intracellular
-
 Atheliachaete sanguinea 5622
-

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4.1.1.2 oxalate + H+ Trametes versicolor inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae formate + CO2
-
 ?
4.1.1.2 oxalate + H+ Dichomitus squalens inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae formate + CO2
-
 ?
4.1.1.2 oxalate + H+ Trametes ochracea inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae formate + CO2
-
 ?
4.1.1.2 oxalate + H+ Atheliachaete sanguinea inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae formate + CO2
-
 ?
4.1.1.2 oxalate + H+ Trametes ochracea T7 inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae formate + CO2
-
 ?
4.1.1.2 oxalate + H+ Atheliachaete sanguinea T51 inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae formate + CO2
-
 ?
4.1.1.2 oxalate + H+ Dichomitus squalens PO114 inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae formate + CO2
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.2 Atheliachaete sanguinea
-
 white rot fungus
-
4.1.1.2 Atheliachaete sanguinea T51
-
 white rot fungus
-
4.1.1.2 Dichomitus squalens
-
 white rot fungus
-
4.1.1.2 Dichomitus squalens PO114
-
 white rot fungus
-
4.1.1.2 no activity in Ceriporiopsis subvermispora
-
 white rot fungus
-
4.1.1.2 no activity in Ceriporiopsis subvermispora CZ-3
-
 white rot fungus
-
4.1.1.2 no activity in Haploporus odorus strain T154
-
 white rot fungus
-
4.1.1.2 no activity in Nematoloma frowardii
-
 white rot fungus
-
4.1.1.2 no activity in Nematoloma frowardii b19
-
 white rot fungus
-
4.1.1.2 no activity in Phanerochaete chrysosporium
-
 ATCC 24725, white rot fungus
-
4.1.1.2 no activity in Phanerochaete chrysosporium F1767
-
 ATCC 24725, white rot fungus
-
4.1.1.2 no activity in Phlebiopsis gigantea
-
 white rot fungus
-
4.1.1.2 no activity in Phlebiopsis gigantea T55
-
 white rot fungus
-
4.1.1.2 no activity in Radulodon erikssonii
-
 white rot fungus
-
4.1.1.2 no activity in Radulodon erikssonii T84
-
 white rot fungus
-
4.1.1.2 no activity in Trichaptum fusco-violaceum
-
 white rot fungus
-
4.1.1.2 no activity in Trichaptum fusco-violaceum T21
-
 white rot fungus
-
4.1.1.2 Trametes ochracea
-
 white rot fungus
-
4.1.1.2 Trametes ochracea T7
-
 white rot fungus
-
4.1.1.2 Trametes versicolor
-
 strain R/7, i.e. ATCC 44308, no activity in strain PRL 572, white rot fungus
-

Specific Activity [micromol/min/mg]

EC Number Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
4.1.1.2 additional information
-
 no activity detectable without induction by oxalic acid Trametes versicolor
4.1.1.2 additional information
-
 no activity detectable without induction by oxalic acid Trametes ochracea
4.1.1.2 additional information
-
 very low activity without induction by oxalic acid Atheliachaete sanguinea
4.1.1.2 9
-
 induced specific activity by 5 mM oxalic acid Trametes ochracea
4.1.1.2 14
-
 non-induced specific activity, growth without oxalic acid Dichomitus squalens
4.1.1.2 15
-
 induced specific activity by 5 mM oxalic acid Atheliachaete sanguinea
4.1.1.2 41
-
 strain R/7, induced specific activity by 5 mM oxalic acid Trametes versicolor
4.1.1.2 86
-
 induced specific activity by 5 mM oxalic acid Dichomitus squalens

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.2 oxalate + H+
-
 Trametes versicolor formate + CO2
-
 ?
4.1.1.2 oxalate + H+
-
 Dichomitus squalens formate + CO2
-
 ?
4.1.1.2 oxalate + H+
-
 Trametes ochracea formate + CO2
-
 ?
4.1.1.2 oxalate + H+
-
 Atheliachaete sanguinea formate + CO2
-
 ?
4.1.1.2 oxalate + H+ inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae Trametes versicolor formate + CO2
-
 ?
4.1.1.2 oxalate + H+ inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae Dichomitus squalens formate + CO2
-
 ?
4.1.1.2 oxalate + H+ inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae Trametes ochracea formate + CO2
-
 ?
4.1.1.2 oxalate + H+ inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae Atheliachaete sanguinea formate + CO2
-
 ?
4.1.1.2 oxalate + H+
-
 Trametes ochracea T7 formate + CO2
-
 ?
4.1.1.2 oxalate + H+ inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae Trametes ochracea T7 formate + CO2
-
 ?
4.1.1.2 oxalate + H+
-
 Atheliachaete sanguinea T51 formate + CO2
-
 ?
4.1.1.2 oxalate + H+ inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae Atheliachaete sanguinea T51 formate + CO2
-
 ?
4.1.1.2 oxalate + H+
-
 Dichomitus squalens PO114 formate + CO2
-
 ?
4.1.1.2 oxalate + H+ inducible enzyme, key role in regulating the level of oxalate concentrations inside the fungal cells and in the vicinity of the fungal hyphae Dichomitus squalens PO114 formate + CO2
-
 ?

Synonyms

EC Number Synonyms Comment Organism
4.1.1.2 ODC
-
 Trametes versicolor
4.1.1.2 ODC
-
 Dichomitus squalens
4.1.1.2 ODC
-
 Trametes ochracea
4.1.1.2 ODC
-
 no activity in Phanerochaete chrysosporium
4.1.1.2 ODC
-
 no activity in Phlebiopsis gigantea
4.1.1.2 ODC
-
 no activity in Radulodon erikssonii
4.1.1.2 ODC
-
 no activity in Trichaptum fusco-violaceum
4.1.1.2 ODC
-
 Atheliachaete sanguinea
4.1.1.2 ODC
-
 no activity in Ceriporiopsis subvermispora
4.1.1.2 ODC
-
 no activity in Haploporus odorus strain T154
4.1.1.2 ODC
-
 no activity in Nematoloma frowardii