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Literature summary extracted from

  • Kim, E.; Zylstra, G.J.
    Molecular and biochemical characterization of two meta-cleavage dioxygenases involved in biphenyl and m-xylene degradation by Beijerinckia sp. strain B1 (1995), J. Bacteriol., 177, 3095-3103.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

EC Number Cloned (Comment) Organism
1.13.11.39 bphC gene cloned Pseudomonas aeruginosa
1.13.11.39 gene bphC for meta-cleavage dioxygenase cloned and sequenced from genomic DNA and expressed in Escherichia coli Sphingobium yanoikuyae

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
1.13.11.39 biphenyl-2,3-diol + O2 Pseudomonas aeruginosa
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2 Pseudomonas sp.
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2 Pseudomonas oleovorans
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2 Sphingobium yanoikuyae
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus globerulus
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus globerulus P6
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
1.13.11.39 Pseudomonas aeruginosa
-
-
-
1.13.11.39 Pseudomonas oleovorans
-
-
-
1.13.11.39 Pseudomonas sp.
-
-
-
1.13.11.39 Rhodococcus globerulus
-
-
-
1.13.11.39 Rhodococcus globerulus P6
-
-
-
1.13.11.39 Sphingobium yanoikuyae
-
 formerly Pseudomonas paucimobilis strain Q1
-
1.13.11.39 Sphingobium yanoikuyae
-
 strain B1, formerly Beijerincka sp. wild-type strain B1
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.13.11.39 3-methylcatechol + O2
-
 Pseudomonas sp. 2-hydroxy-6-oxohepta-2,4-dienoate
-
 ?
1.13.11.39 3-methylcatechol + O2
-
 Pseudomonas oleovorans 2-hydroxy-6-oxohepta-2,4-dienoate
-
 ?
1.13.11.39 3-methylcatechol + O2
-
 Sphingobium yanoikuyae 2-hydroxy-6-oxohepta-2,4-dienoate
-
 ?
1.13.11.39 4-chlorocatechol + O2
-
 Pseudomonas sp. 4-chloro-2-hydroxy-6-oxohexa-2,4-dienoate
-
 ?
1.13.11.39 4-chlorocatechol + O2
-
 Pseudomonas oleovorans 4-chloro-2-hydroxy-6-oxohexa-2,4-dienoate
-
 ?
1.13.11.39 4-chlorocatechol + O2
-
 Sphingobium yanoikuyae 4-chloro-2-hydroxy-6-oxohexa-2,4-dienoate
-
 ?
1.13.11.39 4-methylcatechol + O2
-
 Pseudomonas sp. 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
 ?
1.13.11.39 4-methylcatechol + O2
-
 Pseudomonas oleovorans 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
 ?
1.13.11.39 4-methylcatechol + O2
-
 Sphingobium yanoikuyae 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Pseudomonas aeruginosa 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Pseudomonas sp. 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Pseudomonas oleovorans 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Sphingobium yanoikuyae 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Rhodococcus globerulus 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Rhodococcus globerulus P6 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 catechol + O2
-
 Pseudomonas sp. ?
-
 ?
1.13.11.39 catechol + O2
-
 Pseudomonas oleovorans ?
-
 ?
1.13.11.39 catechol + O2
-
 Sphingobium yanoikuyae ?
-
 ?
1.13.11.39 additional information
-
 Pseudomonas sp. ?
-
 ?
1.13.11.39 additional information 3-chlorocatechol is no substrate Sphingobium yanoikuyae ?
-
 ?