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Literature summary extracted from

  • Seeger, M.; Camara, B.; Hofer, B.
    Dehalogenation, denitration, dehydroxylation, and angular attack on substituted biphenyls and related compounds by a biphenyl dioxygenase (2001), J. Bacteriol., 183, 3548-3555.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

EC Number Cloned (Comment) Organism
1.13.11.39
-
 Burkholderia cepacia
1.14.12.18 in Escherichia coli, strain BL21(DE3) Pseudomonas sp.

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
1.13.11.39 biphenyl-2,3-diol + O2 Burkholderia cepacia
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus globerulus
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2 Rhodococcus globerulus P6
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2 Burkholderia cepacia LB400
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.14.12.18 additional information Burkholderia sp. enzyme of biphenyl catabolic pathway ?
-
 ?
1.14.12.18 additional information Burkholderia sp. LB400 enzyme of biphenyl catabolic pathway ?
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
1.13.11.39 Burkholderia cepacia
-
-
-
1.13.11.39 Burkholderia cepacia LB400
-
-
-
1.13.11.39 Rhodococcus globerulus
-
-
-
1.13.11.39 Rhodococcus globerulus P6
-
-
-
1.14.12.18 Burkholderia sp.
-
-
-
1.14.12.18 Burkholderia sp. LB400
-
-
-
1.14.12.18 Pseudomonas sp.
-
-
-
1.14.12.18 Pseudomonas sp.
-
 other name Burkholderia sp.
-
1.14.12.18 Pseudomonas sp. LB400
-
-
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.13.11.39 2,2'-dibromobiphenyl + O2
-
 Burkholderia cepacia ?
-
 ?
1.13.11.39 2,2'-dibromobiphenyl + O2
-
 Burkholderia cepacia LB400 ?
-
 ?
1.13.11.39 2,2'-difluorobiphenyl + O2
-
 Burkholderia cepacia ?
-
 ?
1.13.11.39 2,2'-difluorobiphenyl + O2
-
 Burkholderia cepacia LB400 ?
-
 ?
1.13.11.39 2,2'-dihydroxybiphenyl + O2
-
 Burkholderia cepacia 6-(2-hydroxyphenyl)-6-oxohexa-2,4-dienoate
-
 ?
1.13.11.39 2,2'-dihydroxybiphenyl + O2
-
 Burkholderia cepacia LB400 6-(2-hydroxyphenyl)-6-oxohexa-2,4-dienoate
-
 ?
1.13.11.39 2,2'-dinitrobiphenyl + O2
-
 Burkholderia cepacia ?
-
 ?
1.13.11.39 2,2'-dinitrobiphenyl + O2
-
 Burkholderia cepacia LB400 ?
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Burkholderia cepacia 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Rhodococcus globerulus 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Rhodococcus globerulus P6 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.13.11.39 biphenyl-2,3-diol + O2
-
 Burkholderia cepacia LB400 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
1.14.12.18 2,2'-dibromobiphenyl + NADH + H+ + O2
-
 Burkholderia sp. ?
-
 ?
1.14.12.18 2,2'-dibromobiphenyl + NADH + H+ + O2
-
 Burkholderia sp. LB400 ?
-
 ?
1.14.12.18 2,2'-dibromobiphenyl + NADH + O2
-
 Pseudomonas sp. 2,3-dihydroxy-2'-bromobiphenyl + NAD+ + HBr
-
 ?
1.14.12.18 2,2'-dibromobiphenyl + NADH + O2
-
 Pseudomonas sp. LB400 2,3-dihydroxy-2'-bromobiphenyl + NAD+ + HBr
-
 ?
1.14.12.18 2,2'-dichlorobiphenyl + NADH + H+ + O2
-
 Burkholderia sp. ?
-
 ?
1.14.12.18 2,2'-dichlorobiphenyl + NADH + H+ + O2
-
 Burkholderia sp. LB400 ?
-
 ?
1.14.12.18 2,2'-dichlorobiphenyl + NADH + O2
-
 Pseudomonas sp. 2,3-dihydroxy-2'-chlorobiphenyl + NAD+ + HCl
-
 ?
1.14.12.18 2,2'-dichlorobiphenyl + NADH + O2
-
 Pseudomonas sp. LB400 2,3-dihydroxy-2'-chlorobiphenyl + NAD+ + HCl
-
 ?
1.14.12.18 2,2'-difluorobiphenyl + NADH + H+ + O2
-
 Burkholderia sp. ?
-
 ?
1.14.12.18 2,2'-difluorobiphenyl + NADH + H+ + O2
-
 Burkholderia sp. LB400 ?
-
 ?
1.14.12.18 2,2'-difluorobiphenyl + NADH + O2
-
 Pseudomonas sp. 2,3-dihydroxy-2'-fluorobiphenyl + 5,6-dihydroxy-2,2'-difluorobiphenyl + NAD+ + HF
-
 ?
1.14.12.18 2,2'-difluorobiphenyl + NADH + O2
-
 Pseudomonas sp. LB400 2,3-dihydroxy-2'-fluorobiphenyl + 5,6-dihydroxy-2,2'-difluorobiphenyl + NAD+ + HF
-
 ?
1.14.12.18 2,2'-dihydroxybiphenyl + NADH + H+ + O2
-
 Burkholderia sp. ?
-
 ?
1.14.12.18 2,2'-dihydroxybiphenyl + NADH + H+ + O2
-
 Burkholderia sp. LB400 ?
-
 ?
1.14.12.18 2,2'-dihydroxybiphenyl + NADH + O2
-
 Pseudomonas sp. 2,3,2'-trihydroxybiphenyl + trihydroxybiphenyl + NAD+
-
 ?
1.14.12.18 2,2'-dihydroxybiphenyl + NADH + O2
-
 Pseudomonas sp. LB400 2,3,2'-trihydroxybiphenyl + trihydroxybiphenyl + NAD+
-
 ?
1.14.12.18 2,2'-dinitrobiphenyl + NADH + H+ + O2
-
 Burkholderia sp. ?
-
 ?
1.14.12.18 2,2'-dinitrobiphenyl + NADH + O2
-
 Pseudomonas sp. 2,3-dihydroxy-2'-nitrobiphenyl + NAD+ + NO2
-
 ?
1.14.12.18 2,2'-dinitrobiphenyl + NADH + O2
-
 Pseudomonas sp. LB400 2,3-dihydroxy-2'-nitrobiphenyl + NAD+ + NO2
-
 ?
1.14.12.18 dibenzo-p-dioxine + NADH + O2
-
 Pseudomonas sp. 2,3,2'-trihydroxy-diphenylether + dibenzo-p-dioxine-dihydrodiol + NAD+
-
 ?
1.14.12.18 dibenzofurane + NADH + O2
-
 Pseudomonas sp. monohydroxydibenzofuran + 2,3,2'-trihydroxybiphenyl + dibenzofuran-1,2-dihydrodiol + dibenzofuran-3,4-dihydrodiol + NAD+
-
 ?
1.14.12.18 additional information enzyme of biphenyl catabolic pathway Burkholderia sp. ?
-
 ?
1.14.12.18 additional information enzyme of biphenyl catabolic pathway Burkholderia sp. LB400 ?
-
 ?