Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|
additional information | - |
length of proteins in amino acids | Salmonella enterica subsp. enterica serovar Typhimurium |
additional information | - |
length of proteins in amino acids | Pseudomonas aeruginosa |
additional information | - |
length of proteins in amino acids | Xanthomonas campestris |
additional information | - |
length of proteins in amino acids | Pseudomonas syringae |
additional information | - |
length of proteins in amino acids | Erwinia sp. |
additional information | - |
length of proteins in amino acids | Ralstonia solanacearum |
additional information | - |
length of proteins in amino acids | Chlamydia sp. |
additional information | - |
length of proteins in amino acids | Shigella flexneri |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
ATP + H2O | Escherichia coli | - |
ADP + phosphate | - |
? | |
ATP + H2O | Xanthomonas campestris | secretion of polygalacturonase | ADP + phosphate | - |
? | |
ATP + H2O | Aeromonas hydrophila | secretion of amylase and protease | ADP + phosphate | - |
? | |
ATP + H2O | Erwinia sp. | secretion of pectic enzymes and cellulase by the type II secretion system | ADP + phosphate | - |
? | |
ATP + H2O | Pseudomonas aeruginosa | secretion of elastase, exotoxin A, phospholipase C, and other proteins | ADP + phosphate | - |
? | |
ATP + H2O | Salmonella enterica subsp. enterica serovar Typhimurium | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | ADP + phosphate | - |
? | |
ATP + H2O | Pseudomonas aeruginosa | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | ADP + phosphate | - |
? | |
ATP + H2O | Pseudomonas syringae | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | ADP + phosphate | - |
? | |
ATP + H2O | Erwinia sp. | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | ADP + phosphate | - |
? | |
ATP + H2O | Ralstonia solanacearum | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | ADP + phosphate | - |
? | |
ATP + H2O | Yersinia sp. | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | ADP + phosphate | - |
? | |
ATP + H2O | Shigella flexneri | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | ADP + phosphate | - |
? | |
ATP + H2O | Yersinia sp. | pathogens use the type III system as a key virulence mechanism | ADP + phosphate | - |
? | |
ATP + H2O | Shigella flexneri | pathogens use the type III system as a key virulence mechanism | ADP + phosphate | - |
? | |
ATP + H2O | Pseudomonas aeruginosa | type II secretion is the primary pathway for the secretion of extracellular degradative enzymes by gram-negative bacteria | ADP + phosphate | - |
? | |
ATP + H2O | Aeromonas hydrophila | type II secretion is the primary pathway for the secretion of extracellular degradative enzymes by gram-negative bacteria | ADP + phosphate | - |
? | |
ATP + H2O | Xanthomonas campestris | type II secretion is the primary pathway for the secretion of extracellular degradative enzymes by gram-negative bacteria | ADP + phosphate | - |
? | |
ATP + H2O | Erwinia sp. | type II secretion is the primary pathway for the secretion of extracellular degradative enzymes by gram-negative bacteria | ADP + phosphate | - |
? | |
ATP + H2O | Salmonella enterica subsp. enterica serovar Typhimurium | the two type II secretion systems, SPI-1 and SPI-2 appear to play different roles during pathogenesis, with SPI-1 being required for initial penetration of the intestinal mucosa and SPI-2 necessary for subsequent systemic stages of infection | ADP + phosphate | - |
? | |
ATP + H2O | Yersinia sp. | the type III secretion mechanism enables Yersinia sp. to inject a number of essential virulence determinants into the cytosol of host target cells. The injected proteins appear to interfere with host cell signal transduction pathway and other cellular processes, allowing Yersinia sp. to obstruct the primary immune response and to establish a systemic infaction | ADP + phosphate | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Aeromonas hydrophila | - |
- |
- |
Bordetella pertussis | - |
type IV secretion system | - |
Chlamydia sp. | - |
- |
- |
Erwinia sp. | - |
type III secretion system | - |
Erwinia sp. | - |
type II secretion system | - |
Escherichia coli | - |
enteropathogenic | - |
Helicobacter pylori | - |
type IV secretion system | - |
Klebsiella oxytoca | - |
type II secretion system | - |
Pseudomonas aeruginosa | - |
type II protein secretion sytem | - |
Pseudomonas syringae | - |
- |
- |
Ralstonia solanacearum | - |
- |
- |
Salmonella enterica subsp. enterica serovar Typhimurium | - |
type III secretion system | - |
Salmonella enterica subsp. enterica serovar Typhimurium | - |
two type III secretion systems, which are encoded by two distinct gene clusters termed SPI-1 and SPI-2 | - |
Shigella flexneri | - |
type III secretion system | - |
Xanthomonas campestris | - |
type II secretion apparatus | - |
Yersinia enterolytica | - |
- |
- |
Yersinia sp. | - |
type III secretion system | - |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
ATP + H2O | - |
Escherichia coli | ADP + phosphate | - |
? | |
ATP + H2O | - |
Klebsiella oxytoca | ADP + phosphate | - |
? | |
ATP + H2O | - |
Yersinia enterolytica | ADP + phosphate | - |
? | |
ATP + H2O | - |
Chlamydia sp. | ADP + phosphate | - |
? | |
ATP + H2O | secretion of polygalacturonase | Xanthomonas campestris | ADP + phosphate | - |
? | |
ATP + H2O | secretion of amylase and protease | Aeromonas hydrophila | ADP + phosphate | - |
? | |
ATP + H2O | secretion of pectic enzymes and cellulase by the type II secretion system | Erwinia sp. | ADP + phosphate | - |
? | |
ATP + H2O | secretion of elastase, exotoxin A, phospholipase C, and other proteins | Pseudomonas aeruginosa | ADP + phosphate | - |
? | |
ATP + H2O | a signature of the sec-dependent protein transport, by the type II and the type IV secretion, is the presence of a short, about 30 amino acids, mainly hydrophobic amino-terminal signal sequence in the exported protein. The signal sequence aids protein export and is cleaved off by a periplasmic signal peptidase when the exported protein reaches the periplasm | Pseudomonas aeruginosa | ADP + phosphate | - |
? | |
ATP + H2O | a signature of the sec-dependent protein transport, by the type II and the type IV secretion, is the presence of a short, about 30 amino acids, mainly hydrophobic amino-terminal signal sequence in the exported protein. The signal sequence aids protein export and is cleaved off by a periplasmic signal peptidase when the exported protein reaches the periplasm | Helicobacter pylori | ADP + phosphate | - |
? | |
ATP + H2O | a signature of the sec-dependent protein transport, by the type II and the type IV secretion, is the presence of a short, about 30 amino acids, mainly hydrophobic amino-terminal signal sequence in the exported protein. The signal sequence aids protein export and is cleaved off by a periplasmic signal peptidase when the exported protein reaches the periplasm | Aeromonas hydrophila | ADP + phosphate | - |
? | |
ATP + H2O | a signature of the sec-dependent protein transport, by the type II and the type IV secretion, is the presence of a short, about 30 amino acids, mainly hydrophobic amino-terminal signal sequence in the exported protein. The signal sequence aids protein export and is cleaved off by a periplasmic signal peptidase when the exported protein reaches the periplasm | Xanthomonas campestris | ADP + phosphate | - |
? | |
ATP + H2O | a signature of the sec-dependent protein transport, by the type II and the type IV secretion, is the presence of a short, about 30 amino acids, mainly hydrophobic amino-terminal signal sequence in the exported protein. The signal sequence aids protein export and is cleaved off by a periplasmic signal peptidase when the exported protein reaches the periplasm | Erwinia sp. | ADP + phosphate | - |
? | |
ATP + H2O | a signature of the sec-dependent protein transport, by the type II and the type IV secretion, is the presence of a short, about 30 amino acids, mainly hydrophobic amino-terminal signal sequence in the exported protein. The signal sequence aids protein export and is cleaved off by a periplasmic signal peptidase when the exported protein reaches the periplasm | Bordetella pertussis | ADP + phosphate | - |
? | |
ATP + H2O | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | Salmonella enterica subsp. enterica serovar Typhimurium | ADP + phosphate | - |
? | |
ATP + H2O | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | Pseudomonas aeruginosa | ADP + phosphate | - |
? | |
ATP + H2O | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | Pseudomonas syringae | ADP + phosphate | - |
? | |
ATP + H2O | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | Erwinia sp. | ADP + phosphate | - |
? | |
ATP + H2O | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | Ralstonia solanacearum | ADP + phosphate | - |
? | |
ATP + H2O | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | Yersinia sp. | ADP + phosphate | - |
? | |
ATP + H2O | secreted proteins, their biochemical activity and interaction with host or other proteins, overview | Shigella flexneri | ADP + phosphate | - |
? | |
ATP + H2O | pathogens use the type III system as a key virulence mechanism | Yersinia sp. | ADP + phosphate | - |
? | |
ATP + H2O | pathogens use the type III system as a key virulence mechanism | Shigella flexneri | ADP + phosphate | - |
? | |
ATP + H2O | type II secretion is the primary pathway for the secretion of extracellular degradative enzymes by gram-negative bacteria | Pseudomonas aeruginosa | ADP + phosphate | - |
? | |
ATP + H2O | type II secretion is the primary pathway for the secretion of extracellular degradative enzymes by gram-negative bacteria | Aeromonas hydrophila | ADP + phosphate | - |
? | |
ATP + H2O | type II secretion is the primary pathway for the secretion of extracellular degradative enzymes by gram-negative bacteria | Xanthomonas campestris | ADP + phosphate | - |
? | |
ATP + H2O | type II secretion is the primary pathway for the secretion of extracellular degradative enzymes by gram-negative bacteria | Erwinia sp. | ADP + phosphate | - |
? | |
ATP + H2O | the two type II secretion systems, SPI-1 and SPI-2 appear to play different roles during pathogenesis, with SPI-1 being required for initial penetration of the intestinal mucosa and SPI-2 necessary for subsequent systemic stages of infection | Salmonella enterica subsp. enterica serovar Typhimurium | ADP + phosphate | - |
? | |
ATP + H2O | the type III secretion mechanism enables Yersinia sp. to inject a number of essential virulence determinants into the cytosol of host target cells. The injected proteins appear to interfere with host cell signal transduction pathway and other cellular processes, allowing Yersinia sp. to obstruct the primary immune response and to establish a systemic infaction | Yersinia sp. | ADP + phosphate | - |
? |
Subunits | Comment | Organism |
---|---|---|
More | - |
Salmonella enterica subsp. enterica serovar Typhimurium |
More | - |
Pseudomonas aeruginosa |
More | - |
Xanthomonas campestris |
More | - |
Shigella flexneri |
More | the secretory pathway comprises a number of inner membrane proteins, SecD to SecF, SecY, a cytoplasmic membrane-associated ATPase, SecA, that provides the energy for export, a chaperone, SecB, that binds to presecretory target proteins, and the periplasmic signal peptidase | Escherichia coli |