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Literature summary for 7.1.1.4 extracted from

  • Komorowski, L.; Verheyen, W.; Schäfer, G.
    The archaeal respiratory supercomplex SoxM from Sulfolobus acidocaldarius combines features of quinole and cytochrome c oxidases (2002), Biol. Chem., 383, 1791-1799.
    View publication on PubMed

Inhibitors

Inhibitors Comment Organism Structure
2-decylchinolone pI50: 4.9 Sulfolobus acidocaldarius
2-dodecyl-N-hydroxychinolone pI50: 5.9 Sulfolobus acidocaldarius
2-methyl-3-dodecyl-N-hydroxy-chinolone pI50: 7.3 Sulfolobus acidocaldarius
2-methyl-3-dodecylchinolone pI50: 6.2 Sulfolobus acidocaldarius
3-methyl-2-decylchinolone pI50: 5.5 Sulfolobus acidocaldarius
cyanide
-
Sulfolobus acidocaldarius
EDTA causes maximal inhibition of either the isolated enzyme, or the activity of the crude membrane extract by 63% with a half-maximal effect at 21 mM Sulfolobus acidocaldarius
additional information benzoquinone, naphthoquinone and phenol derivatives do not influence the reactivity Sulfolobus acidocaldarius
phosphate inhibitory effect which at the pH-optimum and 50 mM phosphate concentration amounts to about 35% Sulfolobus acidocaldarius

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.036
-
caldariellaquinol pH 4.5, 50°C Sulfolobus acidocaldarius
0.057
-
ferrocytochrome c pH 4.5, 50°C Sulfolobus acidocaldarius

Metals/Ions

Metals/Ions Comment Organism Structure
Cu the enzyme contains a total of seven metal redox centers. One of it, the blue copper protein sulfocyanin, functionally links two subcomplexes. One is a bb3-type terminal oxidase moiety containing CuA and CuB, whereas the other consists of a Rieske FeS-protein and a homolog to cytochrome b – in this case hosting two hemes AS. Based on a 1:1 stoichiometry, 1 mol complex contains 6 mol Fe and 4 mol Cu Sulfolobus acidocaldarius
Fe the enzyme contains a total of seven metal redox centers. One of it, the blue copper protein sulfocyanin, functionally links two subcomplexes. One is a bb3-type terminal oxidase moiety containing CuA and CuB, whereas the other consists of a Rieske FeS-protein and a homolog to cytochrome b – in this case hosting two hemes AS. Based on a 1:1 stoichiometry, 1 mol complex contains 6 mol Fe and 4 mol Cu Sulfolobus acidocaldarius

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
224000
-
gel filtration Sulfolobus acidocaldarius

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
caldariellaquinol + O2 + n H+/in Sulfolobus acidocaldarius function as a redox-driven proton pump, within the SoxGFE assembly of the supercomplex acting as a caldariella-quinol:sulfocyanin oxidoreductase caldariellaquinone + H2O + n H+/out
-
?

Organism

Organism UniProt Comment Textmining
Sulfolobus acidocaldarius P39481 and Q97UN3 and Q53765 and Q53766 and Q59825 and Q53768 P39481 (soxM), Q97UN3 (soxG), Q53765 (soxE), Q53766 (soxD), Q59825 (soxH), Q53768 (soxI)
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4 ferrocytochrome c + O2 + 4 H+ enzymatic activity is monitored with reduced cytochrome c despite not being the natural substrate. Sulfolobus acidocaldarius does not contain any c-type cytochrome. However, it can be used for in vitro assays of the terminal oxidase moiety in the complex because electrons can be accepted form either sulfocyanin (SoxE) or from SoxH. SoxABCD does not react with cytochrome c. The tested activity is specific for the SoxM complex Sulfolobus acidocaldarius 4 ferricytochrome c + 2 H2O
-
?
caldariellaquinol + O2 + n H+/in function as a redox-driven proton pump, within the SoxGFE assembly of the supercomplex acting as a caldariella-quinol:sulfocyanin oxidoreductase Sulfolobus acidocaldarius caldariellaquinone + H2O + n H+/out
-
?
caldariellaquinol + O2 + n H+/in the SoxM-complex can oxidize the electron donor horseheart cytochrome c as well as caldariellaquinol. Based on genetic information it is suggested that the complex provides two proton pumping sites. However a preparation of liposomes with tetraether lipids together with the complex is not sufficient to perform proton pumping experiments Sulfolobus acidocaldarius caldariellaquinone + H2O + n H+/out
-
?

Subunits

Subunits Comment Organism
More 6 polypeptide subunits: SoxM (87000 Da), SoxG (56000 Da), SoxE (21000 Da) , SoxF (26800 Da), SoxH (16300 Da), SoxI (16800 Da). Proposed structural organization of the supercomplex: therein the polypeptides SoxG, SoxF, and SoxE represent an assembly. Sulfocyanin (SoxE) has a typical membrane spanning N-terminal anchor sequence fixing it firmly to the complex Sulfolobus acidocaldarius

Synonyms

Synonyms Comment Organism
SoxM supercomplex
-
Sulfolobus acidocaldarius

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
50
-
assay at Sulfolobus acidocaldarius

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
4.5
-
assay at Sulfolobus acidocaldarius
5.3
-
-
Sulfolobus acidocaldarius

Cofactor

Cofactor Comment Organism Structure
heme the enzyme contains 2 heme As and 2 heme B (b and b3) Sulfolobus acidocaldarius

General Information

General Information Comment Organism
physiological function the enzyme may be involved in the electron pathway, it may be involved in regulatory adaptation to environmental stress Sulfolobus acidocaldarius