Cloned (Comment) | Organism |
---|---|
expressed in Escherichia coli BL21(DE3) cells | Bacillus subtilis |
expressed in Escherichia coli BL21(DE3) cells | Pseudomonas aeruginosa |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)m | Bacillus subtilis | - |
(deoxyribonucleotide)n+m + AMP + diphosphate | - |
? | |
ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)m | Pseudomonas aeruginosa | - |
(deoxyribonucleotide)n+m + AMP + diphosphate | - |
? | |
ATP + [DNA ligase]-L-lysine | Bacillus subtilis | - |
[DNA ligase]-N6-(5'-adenylyl)-L-lysine + diphosphate | - |
? | |
ATP + [DNA ligase]-L-lysine | Pseudomonas aeruginosa | - |
[DNA ligase]-N6-(5'-adenylyl)-L-lysine + diphosphate | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Bacillus subtilis | - |
- |
- |
Pseudomonas aeruginosa | - |
- |
- |
Purification (Comment) | Organism |
---|---|
Ni-NTA column chromatography | Bacillus subtilis |
Ni-NTA column chromatography | Pseudomonas aeruginosa |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)m | - |
Bacillus subtilis | (deoxyribonucleotide)n+m + AMP + diphosphate | - |
? | |
ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)m | - |
Pseudomonas aeruginosa | (deoxyribonucleotide)n+m + AMP + diphosphate | - |
? | |
ATP + [DNA ligase]-L-lysine | - |
Bacillus subtilis | [DNA ligase]-N6-(5'-adenylyl)-L-lysine + diphosphate | - |
? | |
ATP + [DNA ligase]-L-lysine | - |
Pseudomonas aeruginosa | [DNA ligase]-N6-(5'-adenylyl)-L-lysine + diphosphate | - |
? | |
additional information | the enzyme also has an intrinsic 5'-2-deoxyribose-5-phosphate lyase activity located at the N-terminal ligase domain that in coordination with the polymerization and ligase activities allows efficient repairing of 2'-deoxyuridine-containing DNA in an in vitro reconstituted base excision repair reaction | Bacillus subtilis | ? | - |
? | |
additional information | the enzyme also has an intrinsic 5'-2-deoxyribose-5-phosphate lyase activity located at the N-terminal ligase domain that in coordination with the polymerization and ligase activities allows efficient repairing of 2'-deoxyuridine-containing DNA in an in vitro reconstituted base excision repair reaction | Pseudomonas aeruginosa | ? | - |
? |
Synonyms | Comment | Organism |
---|---|---|
ATP-dependent DNA ligase | - |
Bacillus subtilis |
ATP-dependent DNA ligase | - |
Pseudomonas aeruginosa |
DNA repair ligase D | - |
Bacillus subtilis |
DNA repair ligase D | - |
Pseudomonas aeruginosa |
LigD | - |
Bacillus subtilis |
LigD | - |
Pseudomonas aeruginosa |