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Literature summary for 6.2.1.B5 extracted from

  • Mocibob, M.; Ivic, N.; Bilokapic, S.; Maier, T.; Luic, M.; Ban, N.; Weygand-Durasevic, I.
    Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis (2010), Proc. Natl. Acad. Sci. USA, 107, 14585-14590.
    View publication on PubMedView publication on EuropePMC

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.0047
-
[acyl-carrier protein Atu2571] pH 7.5, 30°C Agrobacterium tumefaciens

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
25698
-
x * 25698, calculated from sequence Agrobacterium tumefaciens

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + L-alanine + [acyl-carrier protein Atu2571] Agrobacterium tumefaciens
-
AMP + diphosphate + L-alanyl-[acyl-carrier protein Atu2571]
-
?

Organism

Organism UniProt Comment Textmining
Agrobacterium tumefaciens Q7CWR3 homologous to the catalytic domain of highly diverged, atypical seryl-tRNA synthetases found only in methanogenic archaea and are deprived of the tRNA-binding domain
-

Purification (Commentary)

Purification (Comment) Organism
-
Agrobacterium tumefaciens

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + L-alanine + [acyl-carrier protein Atu2571]
-
Agrobacterium tumefaciens AMP + diphosphate + L-alanyl-[acyl-carrier protein Atu2571]
-
?
ATP + L-alanine + [acyl-carrier protein Atu2571] the carrier protein Atu2571 is cloned and overexpressed in Escherichia coli (UniProt: A9CHM9). The 4'-phosphopantetheinyl prosthetic group is attached to purified apo-carrier proteins. The enzyme is homologous to the catalytic domain of highly diverged, atypical seryl-tRNA synthetases found only in methanogenic archaea and are deprived of the tRNA-binding domain. In comparison to seryl-tRNA synthetases, the homolog displays different and relaxed amino acid specificity. The homolog lacks canonical tRNA aminoacylating activity and instead transfers activated amino acid to phosphopantetheine prosthetic group of putative carrier proteins, whose genes are identified in the genomic surroundings of the homolog. In the ATP-diphosphate exchange assay the enzyme prefers L-alanine over L-glycine or L-serine about 30-40fold, and activates L-Glu and L-Pro albeit more than three orders of magnitude less efficiently than L-alanine Agrobacterium tumefaciens AMP + diphosphate + L-alanyl-[acyl-carrier protein Atu2571]
-
?

Subunits

Subunits Comment Organism
? x * 25698, calculated from sequence Agrobacterium tumefaciens

Synonyms

Synonyms Comment Organism
aa:CP ligase
-
Agrobacterium tumefaciens
Atu2573 protein
-
Agrobacterium tumefaciens

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
30
-
assay at Agrobacterium tumefaciens

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
0.31
-
[acyl-carrier protein Atu2571] pH 7.5, 30°C Agrobacterium tumefaciens

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.5
-
assay at Agrobacterium tumefaciens

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
68
-
[acyl-carrier protein Atu2571] pH 7.5, 30°C Agrobacterium tumefaciens