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Literature summary for 6.1.1.1 extracted from

  • Jordanova, A.; Irobi, J.; Thomas, F.P.; Van Dijck, P.; Meerschaert, K.; Dewil, M.; Dierick, I.; Jacobs, A.; De Vriendt, E.; Guergueltcheva, V.; Rao, C.V.; Tournev, I.; Gondim, F.A.; DHooghe, M.; Van Gerwen, V.; Callaerts, P.; Van Den Bosch, L.; Timmermans, J.P.; Robberecht, W.; Gettemans, J.; The, T.h.e.v.
    Disrupted function and axonal distribution of mutant tyrosyl-tRNA synthetase in dominant intermediate Charcot-Marie-Tooth neuropathy (2006), Nat. Genet., 38, 197-202.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
DNA and amino acid sequence determination of wild-type and mutant enzymes, localization of the gene encoding the enzyme on chromosome 1p34-p35, functional complementation of a Saccharomyces cerevisiae TYS1 mutant strain, overview, transient expression of EGFP-tagged wild-type and mutant enzymes in murine neuroblastoma N2a cells Homo sapiens

Protein Variants

Protein Variants Comment Organism
E196K naturally occuring mutation in the autosomal dominant intermediate Charcot-Marie-Tooth neuropathy type C disorder, the mutant enzyme shows reduced activity and specific distribution in the cell compared to the wild-type enzyme, no functional complementation of a Saccharomyces cerevisiae TYS1 mutant strain, the mutant shows altered distribution in neuronal cells compared to the wild-type enzyme when recombinantly expressed Homo sapiens
G41R naturally occuring mutation in the autosomal dominant intermediate Charcot-Marie-Tooth neuropathy type C disorder, the mutant enzyme shows reduced activity and specific distribution in the cell compared to the wild-type enzyme, partial functional complementation of a Saccharomyces cerevisiae TYS1 mutant strain, the mutant shows altered distribution in neuronal cells compared to the wild-type enzyme when recombinantly expressed Homo sapiens
additional information disrupted function and axonal distribution of the mutant enzyme in autosomal dominant intermediate Charcot-Marie-Tooth neuropathy type C, a common disorder of the peripheral nervous system, caused by demyelination or axonal degeneration or a combination of both, mutant families analysis, mutation analysis, phenotype, overview Homo sapiens

Localization

Localization Comment Organism GeneOntology No. Textmining
axon axonal termini in differentiating primary motor neuron and neuroblastoma cultures Homo sapiens 30424
-
additional information subcellular localization of wild-type and mutant YARS, overview Homo sapiens
-
-

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+
-
Homo sapiens

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + L-tyrosine + tRNATyr Homo sapiens
-
AMP + diphosphate + L-tyrosyl-tRNATyr
-
?
additional information Homo sapiens TyrRS deficiency is involved in the autosomal dominant intermediate Charcot-Marie-Tooth neuropathy type C disorder, overview ?
-
?

Organism

Organism UniProt Comment Textmining
Homo sapiens
-
-
-

Source Tissue

Source Tissue Comment Organism Textmining
brain
-
Homo sapiens
-
additional information YARS is expressed ubiquitously, in neuronal cells making extensions, the enzyme is located at outgrowth behaving like an early polarity maker, overview Homo sapiens
-
neuroblastoma cell differentiating, YARS locates mostly in the granular structures of the growth cone, branch points and the most distal part of of projecting neurites, co-localization with synaptophysin Homo sapiens
-
neuron e.g. primary embryonic motor neurons Homo sapiens
-
SH-SY5Y cell
-
Homo sapiens
-
spinal cord
-
Homo sapiens
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + L-tyrosine + tRNATyr
-
Homo sapiens AMP + diphosphate + L-tyrosyl-tRNATyr
-
?
additional information TyrRS deficiency is involved in the autosomal dominant intermediate Charcot-Marie-Tooth neuropathy type C disorder, overview Homo sapiens ?
-
?

Synonyms

Synonyms Comment Organism
Tyrosyl-tRNA synthetase
-
Homo sapiens
YARS
-
Homo sapiens

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
37
-
assay at Homo sapiens

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.6
-
assay at Homo sapiens

Cofactor

Cofactor Comment Organism Structure
ATP
-
Homo sapiens