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Literature summary for 5.1.3.2 extracted from

  • Barber, C.; Roesti, J.; Rawat, A.; Findlay, K.; Roberts, K.; Seifert, G.J.
    Distinct properties of the five UDP-D-glucose/UDP-D-galactose 4-epimerase isoforms of Arabidopsis thaliana (2006), J. Biol. Chem., 281, 17276-17285.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expression in Escherichia coli and Saccharomyces cerevisiae Arabidopsis thaliana

Inhibitors

Inhibitors Comment Organism Structure
additional information inhibited by combination of 100 microM NADH and 10 microM NAD+ Arabidopsis thaliana
NaCl
-
Arabidopsis thaliana
NADH slightly inhibiting Arabidopsis thaliana
NADPH very weak inhibitory effect Arabidopsis thaliana
UDP
-
Arabidopsis thaliana

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.09
-
UDP-glucose values are indirectly determined from the Haldane relationship Arabidopsis thaliana
0.1 0.13 UDP-galactose Different enzyme concentrations give slight variations in activity. Arabidopsis thaliana
0.13
-
UDP-glucose values are indirectly determined from the Haldane relationship Arabidopsis thaliana
0.17 0.22 UDP-galactose Different enzyme concentrations give slight variations in activity. Arabidopsis thaliana
0.19
-
UDP-glucose values are indirectly determined from the Haldane relationship Arabidopsis thaliana
0.19 0.22 UDP-galactose Different enzyme concentrations give slight variations in activity. Arabidopsis thaliana
0.23 0.3 UDP-galactose Different enzyme concentrations give slight variations in activity. Arabidopsis thaliana
0.56
-
UDP-glucose values are indirectly determined from the Haldane relationship Arabidopsis thaliana
0.76
-
UDP-glucose values are indirectly determined from the Haldane relationship Arabidopsis thaliana

Localization

Localization Comment Organism GeneOntology No. Textmining
cytoplasm
-
Arabidopsis thaliana 5737
-
Golgi apparatus
-
Arabidopsis thaliana 5794
-

Metals/Ions

Metals/Ions Comment Organism Structure
NaCl increases the activity Arabidopsis thaliana

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
40000
-
gel filtration Arabidopsis thaliana
40200
-
gel filtration Arabidopsis thaliana
40300
-
gel filtration Arabidopsis thaliana
40800
-
gel filtration Arabidopsis thaliana
41100
-
gel filtration Arabidopsis thaliana
84000
-
Dynamic Light Scattering, calculated from the hydrodynamic radius using the default volume shape hydration model. Arabidopsis thaliana
91000
-
Dynamic Light Scattering, calculated from the hydrodynamic radius using the default volume shape hydration model. Arabidopsis thaliana
98000
-
Dynamic Light Scattering, calculated from the hydrodynamic radius using the default volume shape hydration model. Arabidopsis thaliana
103000
-
Dynamic Light Scattering, calculated from the hydrodynamic radius using the default volume shape hydration model. Arabidopsis thaliana

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
UDP-D-glucose Arabidopsis thaliana carbohydrate biosynthesis UDP-D-galactose
-
r
UDP-D-glucose Arabidopsis thaliana carbohydrate catabolism UDP-D-galactose
-
r

Organism

Organism UniProt Comment Textmining
Arabidopsis thaliana
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
UDP-D-glucose carbohydrate biosynthesis Arabidopsis thaliana UDP-D-galactose
-
r
UDP-D-glucose carbohydrate catabolism Arabidopsis thaliana UDP-D-galactose
-
r

Subunits

Subunits Comment Organism
dimer
-
Arabidopsis thaliana

Synonyms

Synonyms Comment Organism
UDP-D-glucose/UDP-D-galactose 4-epimerase
-
Arabidopsis thaliana
UGE1
-
Arabidopsis thaliana
UGE2
-
Arabidopsis thaliana
UGE3
-
Arabidopsis thaliana
UGE4
-
Arabidopsis thaliana
UGE5
-
Arabidopsis thaliana

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
30
-
-
Arabidopsis thaliana
35
-
-
Arabidopsis thaliana
40
-
-
Arabidopsis thaliana

Temperature Range [°C]

Temperature Minimum [°C] Temperature Maximum [°C] Comment Organism
30 40
-
Arabidopsis thaliana

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
2 8 UDP-glucose The approximate value is estimated from reaction velocities at saturating substrate concentrations (5–9 mM). Arabidopsis thaliana
19
-
UDP-glucose The approximate value is estimated from reaction velocities at saturating substrate concentrations (5–9 mM). Arabidopsis thaliana
23 24 UDP-galactose Different enzyme concentrations give slight variations in activity. Arabidopsis thaliana
24
-
UDP-glucose The approximate value is estimated from reaction velocities at saturating substrate concentrations (5–9 mM). Arabidopsis thaliana
28 34 UDP-galactose Different enzyme concentrations give slight variations in activity. Arabidopsis thaliana
32
-
UDP-glucose The approximate value is estimated from reaction velocities at saturating substrate concentrations (5–9 mM). Arabidopsis thaliana
33
-
UDP-glucose The approximate value is estimated from reaction velocities at saturating substrate concentrations (5–9 mM). Arabidopsis thaliana
42 66 UDP-galactose Different enzyme concentrations give slight variations in activity. Arabidopsis thaliana
89 101 UDP-galactose Different enzyme concentrations give slight variations in activity. Arabidopsis thaliana
115 128 UDP-galactose Different enzyme concentrations give slight variations in activity. Arabidopsis thaliana

pH Range

pH Minimum pH Maximum Comment Organism
5 7 MES buffer Arabidopsis thaliana
6.5 9.5 Tris/HCl buffer Arabidopsis thaliana

Cofactor

Cofactor Comment Organism Structure
NAD+
-
Arabidopsis thaliana
NAD+ is particularly important Arabidopsis thaliana