Any feedback?
Please rate this page
(literature.php)
(0/150)

BRENDA support

Literature summary for 5.1.1.1 extracted from

  • Ju, J.; Xu, S.; Furukawa, Y.; Zhang, Y.; Misono, H.; Minamino, T.; Namba, K.; Zhao, B.; Ohnishi, K.
    Correlation between catalytic activity and monomer-dimer equilibrium of bacterial alanine racemases (2011), J. Biochem., 149, 83-89.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli BL21(DE3) cells Salmonella enterica subsp. enterica serovar Typhimurium
expressed in Escherichia coli BL21(DE3) cells Escherichia coli
expressed in Escherichia coli BL21(DE3) cells Pseudomonas fluorescens
expressed in Escherichia coli BL21(DE3) cells Pseudomonas aeruginosa
expressed in Escherichia coli BL21(DE3) cells Pseudomonas putida

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
4.1
-
L-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas aeruginosa
4.2
-
D-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas aeruginosa
4.7
-
D-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas fluorescens
5.6
-
D-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas aeruginosa
6.1
-
D-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Salmonella enterica subsp. enterica serovar Typhimurium
6.9
-
D-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Escherichia coli
7.3
-
D-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas putida
7.4
-
L-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas putida
8.1
-
L-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas fluorescens
8.7
-
D-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas fluorescens
9.3
-
L-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Salmonella enterica subsp. enterica serovar Typhimurium
9.8
-
L-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas aeruginosa
17.4
-
L-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Escherichia coli
18.4
-
L-alanine in 50 mM potassium phosphate buffer pH 7.4, at 30°C Pseudomonas fluorescens

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
38337
-
2 * 38337, calculated from amino acid sequence Pseudomonas aeruginosa
38765
-
2 * 38765, calculated from amino acid sequence Pseudomonas putida
38883
-
2 * 38883, calculated from amino acid sequence Pseudomonas fluorescens
38978
-
2 * 38978, calculated from amino acid sequence Pseudomonas fluorescens
39068
-
2 * 39068, calculated from amino acid sequence Pseudomonas aeruginosa
39075
-
2 * 39075, calculated from amino acid sequence Salmonella enterica subsp. enterica serovar Typhimurium
39152
-
2 * 39152, calculated from amino acid sequence Escherichia coli
40000
-
2 * 40000, SDS-PAGE Salmonella enterica subsp. enterica serovar Typhimurium
40000
-
2 * 40000, SDS-PAGE Escherichia coli
40000
-
2 * 40000, SDS-PAGE Pseudomonas fluorescens
40000
-
2 * 40000, SDS-PAGE Pseudomonas aeruginosa
40000
-
2 * 40000, SDS-PAGE Pseudomonas putida
80000
-
gel filtration Salmonella enterica subsp. enterica serovar Typhimurium
80000
-
gel filtration Escherichia coli
80000
-
gel filtration Pseudomonas fluorescens
80000
-
gel filtration Pseudomonas aeruginosa
80000
-
gel filtration Pseudomonas putida

Organism

Organism UniProt Comment Textmining
Escherichia coli
-
-
-
Pseudomonas aeruginosa
-
-
-
Pseudomonas fluorescens
-
-
-
Pseudomonas fluorescens LRB3W1
-
-
-
Pseudomonas fluorescens TM5-2
-
-
-
Pseudomonas putida
-
-
-
Pseudomonas putida KT 2240
-
-
-
Salmonella enterica subsp. enterica serovar Typhimurium
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
D-alanine
-
Salmonella enterica subsp. enterica serovar Typhimurium L-alanine
-
r
D-alanine
-
Escherichia coli L-alanine
-
r
D-alanine
-
Pseudomonas fluorescens L-alanine
-
r
D-alanine
-
Pseudomonas aeruginosa L-alanine
-
r
D-alanine
-
Pseudomonas putida L-alanine
-
r
D-alanine
-
Pseudomonas fluorescens LRB3W1 L-alanine
-
r
D-alanine
-
Pseudomonas fluorescens TM5-2 L-alanine
-
r
D-alanine
-
Pseudomonas putida KT 2240 L-alanine
-
r
L-alanine
-
Salmonella enterica subsp. enterica serovar Typhimurium D-alanine
-
r
L-alanine
-
Escherichia coli D-alanine
-
r
L-alanine
-
Pseudomonas fluorescens D-alanine
-
r
L-alanine
-
Pseudomonas aeruginosa D-alanine
-
r
L-alanine
-
Pseudomonas putida D-alanine
-
r
L-alanine
-
Pseudomonas fluorescens LRB3W1 D-alanine
-
r
L-alanine
-
Pseudomonas fluorescens TM5-2 D-alanine
-
r
L-alanine
-
Pseudomonas putida KT 2240 D-alanine
-
r

Subunits

Subunits Comment Organism
homodimer 2 * 40000, SDS-PAGE Salmonella enterica subsp. enterica serovar Typhimurium
homodimer 2 * 40000, SDS-PAGE Escherichia coli
homodimer 2 * 40000, SDS-PAGE Pseudomonas fluorescens
homodimer 2 * 40000, SDS-PAGE Pseudomonas aeruginosa
homodimer 2 * 40000, SDS-PAGE Pseudomonas putida
homodimer 2 * 38337, calculated from amino acid sequence Pseudomonas aeruginosa
homodimer 2 * 38765, calculated from amino acid sequence Pseudomonas putida
homodimer 2 * 38883, calculated from amino acid sequence Pseudomonas fluorescens
homodimer 2 * 38978, calculated from amino acid sequence Pseudomonas fluorescens
homodimer 2 * 39068, calculated from amino acid sequence Pseudomonas aeruginosa
homodimer 2 * 39075, calculated from amino acid sequence Salmonella enterica subsp. enterica serovar Typhimurium
homodimer 2 * 39152, calculated from amino acid sequence Escherichia coli

Synonyms

Synonyms Comment Organism
ALR
-
Salmonella enterica subsp. enterica serovar Typhimurium
ALR
-
Escherichia coli
ALR
-
Pseudomonas aeruginosa
DadX
-
Pseudomonas fluorescens
DadX
-
Pseudomonas aeruginosa
DadX
-
Pseudomonas putida

Cofactor

Cofactor Comment Organism Structure
pyridoxal 5'-phosphate
-
Salmonella enterica subsp. enterica serovar Typhimurium
pyridoxal 5'-phosphate
-
Escherichia coli
pyridoxal 5'-phosphate
-
Pseudomonas fluorescens
pyridoxal 5'-phosphate
-
Pseudomonas aeruginosa
pyridoxal 5'-phosphate
-
Pseudomonas putida