BRENDA - Enzyme Database
show all sequences of 4.2.1.125

SNPs of dammarenediol synthase gene were associated with the accumulation of ginsenosides in DAMAYA ginseng, a cultivar of Panax ginseng C. A. Mey

Cheng, C.; Wu, W.; Huang, B.; Liu, L.; Luo, P.; Zhou, H.; Phytochem. Lett. 17, 194-200 (2016)
No PubMed abstract available

Data extracted from this reference:

Cloned(Commentary)
Cloned (Commentary)
Organism
gene DDS, genotyping of cv. DAMAYA, identification of single nucleotide polymorphisms
Panax ginseng
Engineering
Protein Variants
Commentary
Organism
additional information
identification of single nucleotide polymorphisms in different samples of Panax ginseng cultivar DAMAYA, specific single nucleotide polymorphisms (SNPs) of the DDS gene might be associated with the accumulation of some ginsenosides in DAMAYA ginseng and thus can be used for varietal characterization, molecular identification, qualitative evaluation of ginseng-type medicinal materials, or gene engineering and ginseng breeding. The ginsenoside contents, of such as Rf, Rg1 and F1, change with the gene mutation
Panax ginseng
Natural Substrates/ Products (Substrates)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
ID
(3S)-2,3-epoxy-2,3-dihydrosqualene + H2O
Panax ginseng
-
dammarenediol II
-
-
r
Organism
Organism
UniProt
Commentary
Textmining
Panax ginseng
Q08IT1
cv. DAMAYA
-
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
Substrate Product ID
(3S)-2,3-epoxy-2,3-dihydrosqualene + H2O
-
748874
Panax ginseng
dammarenediol II
-
-
-
r
Synonyms
Synonyms
Commentary
Organism
dammarenediol synthase
-
Panax ginseng
Cloned(Commentary) (protein specific)
Commentary
Organism
gene DDS, genotyping of cv. DAMAYA, identification of single nucleotide polymorphisms
Panax ginseng
Engineering (protein specific)
Protein Variants
Commentary
Organism
additional information
identification of single nucleotide polymorphisms in different samples of Panax ginseng cultivar DAMAYA, specific single nucleotide polymorphisms (SNPs) of the DDS gene might be associated with the accumulation of some ginsenosides in DAMAYA ginseng and thus can be used for varietal characterization, molecular identification, qualitative evaluation of ginseng-type medicinal materials, or gene engineering and ginseng breeding. The ginsenoside contents, of such as Rf, Rg1 and F1, change with the gene mutation
Panax ginseng
Natural Substrates/ Products (Substrates) (protein specific)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
ID
(3S)-2,3-epoxy-2,3-dihydrosqualene + H2O
Panax ginseng
-
dammarenediol II
-
-
r
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
ID
(3S)-2,3-epoxy-2,3-dihydrosqualene + H2O
-
748874
Panax ginseng
dammarenediol II
-
-
-
r
General Information
General Information
Commentary
Organism
additional information
determination of ginsenosides, i.e. Rg1, Re, F11, Rf, S-Rh1, Rg2, Rb1, R-Rh1, Rc, F1, R0, Rb2, Rb3, Rd, F2, S-Rg3, R1, and R-Rg3, in Panax ginseng cv. DAMAYA. The ginsenoside contents, of such as Rf, Rg1 and F1, change with the gene mutation
Panax ginseng
physiological function
dammarenediol synthase is a key enzyme in the biosynthetic process of ginsenosides
Panax ginseng
General Information (protein specific)
General Information
Commentary
Organism
additional information
determination of ginsenosides, i.e. Rg1, Re, F11, Rf, S-Rh1, Rg2, Rb1, R-Rh1, Rc, F1, R0, Rb2, Rb3, Rd, F2, S-Rg3, R1, and R-Rg3, in Panax ginseng cv. DAMAYA. The ginsenoside contents, of such as Rf, Rg1 and F1, change with the gene mutation
Panax ginseng
physiological function
dammarenediol synthase is a key enzyme in the biosynthetic process of ginsenosides
Panax ginseng
Other publictions for EC 4.2.1.125
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Synonyms
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
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Liu
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Cheng
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SNPs of dammarenediol synthas ...
Panax ginseng
Phytochem. Lett.
17
194-200
2016
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Dammarenediol-II production co ...
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