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Literature summary for 4.2.1.1 extracted from

  • De Simone, G.; Monti, S.M.; Alterio, V.; Buonanno, M.; De Luca, V.; Rossi, M.; Carginale, V.; Supuran, C.T.; Capasso, C.; Di Fiore, A.
    Crystal structure of the most catalytically effective carbonic anhydrase enzyme known, SazCA from the thermophilic bacterium Sulfurihydrogenibium azorense (2015), Bioorg. Med. Chem. Lett., 25, 2002-2006 .
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
recombinant expression of His-tagged enzyme in Escherichia coli strain BL21(DE3) Sulfurihydrogenibium azorense

Crystallization (Commentary)

Crystallization (Comment) Organism
purified recombinant His-tagged enzyme incomplex with inhibitor acetazolamide, hanging drop vapor diffusion method, mixing of 0.001 ml of 8 mg/ml protein in 20 mM Tris, pH 8.3, and a 10-molar excess of the inhibitor with 0.001 m of reservoir solution containing 30% w/v PEG monomethyl ether 550, 0.05 M MgCl2, and 0.1 M HEPES, pH 7.5, and equilibration against 0.5 ml of reservoir solution, 1 week, room temperature, X-ray diffraction structure determination and analysis at 1.95 A resolution, molecular replacement using the structure of enzyme SspCA from Sulfurihydrogenibium yellowstonensis (PDB ID 4G7A) as a search model Sulfurihydrogenibium azorense

Inhibitors

Inhibitors Comment Organism Structure
acetazolamide AZM, strong inhibitor Sulfurihydrogenibium azorense

Metals/Ions

Metals/Ions Comment Organism Structure
Zn2+ required, metalloenzyme, on the bottom of a central cavity, the catalytic zinc ion is tetrahedrally coordinated by the three histidine residues (His89, His91 and His108) Sulfurihydrogenibium azorense

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
CO2 + H2O Sulfurihydrogenibium azorense
-
H2CO3
-
r
CO2 + H2O Sulfurihydrogenibium azorense Az-Fu1 / DSM 15241 / OCM 825
-
H2CO3
-
r
H2CO3 Sulfurihydrogenibium azorense
-
CO2 + H2O
-
r
H2CO3 Sulfurihydrogenibium azorense Az-Fu1 / DSM 15241 / OCM 825
-
CO2 + H2O
-
r
additional information Sulfurihydrogenibium azorense enzyme SazCA is highly active in the CO2 hydration reaction ?
-
?
additional information Sulfurihydrogenibium azorense Az-Fu1 / DSM 15241 / OCM 825 enzyme SazCA is highly active in the CO2 hydration reaction ?
-
?

Organism

Organism UniProt Comment Textmining
Sulfurihydrogenibium azorense C1DTU5
-
-
Sulfurihydrogenibium azorense Az-Fu1 / DSM 15241 / OCM 825 C1DTU5
-
-

Purification (Commentary)

Purification (Comment) Organism
recombinant His-tagged enzyme from Escherichia coli strain BL21(DE3) by nickel affinity chromatography, dialysis, and gel filtration, followed by pAMBS affinity chromatography Sulfurihydrogenibium azorense

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
CO2 + H2O
-
Sulfurihydrogenibium azorense H2CO3
-
r
CO2 + H2O
-
Sulfurihydrogenibium azorense Az-Fu1 / DSM 15241 / OCM 825 H2CO3
-
r
H2CO3
-
Sulfurihydrogenibium azorense CO2 + H2O
-
r
H2CO3
-
Sulfurihydrogenibium azorense Az-Fu1 / DSM 15241 / OCM 825 CO2 + H2O
-
r
additional information enzyme SazCA is highly active in the CO2 hydration reaction Sulfurihydrogenibium azorense ?
-
?
additional information enzyme SazCA is highly active in the CO2 hydration reaction Sulfurihydrogenibium azorense Az-Fu1 / DSM 15241 / OCM 825 ?
-
?

Subunits

Subunits Comment Organism
homodimer SazCA enzyme three-dimensional structure determination and analysis, structure comparison with the enzyme from Sulfurihydrogenibium yellowstonensis, PDB ID 4G7A. The SazCA monomer adopts the canonical fold of the alpha-CA family members consisting of a central ten-stranded beta-sheet surrounded by alpha- and 310-helices as well as small additional beta-sheets. The active site of each monomer within the dimer is completely accessible to the solvent and, as observed for other alpha-CAs, is located in a cavity which extends from the surface to the center of the protein Sulfurihydrogenibium azorense

Synonyms

Synonyms Comment Organism
alpha-CA
-
Sulfurihydrogenibium azorense
alpha-carbonic anhydrase
-
Sulfurihydrogenibium azorense
SazCA
-
Sulfurihydrogenibium azorense
SULAZ_0541
-
Sulfurihydrogenibium azorense

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
20
-
assay at Sulfurihydrogenibium azorense

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
4400000
-
CO2 pH 7.5, 20°C, recombinant His-tagged enzyme Sulfurihydrogenibium azorense

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.5
-
assay at Sulfurihydrogenibium azorense

General Information

General Information Comment Organism
additional information identification of the structural features responsible for the high catalytic activity of the enzyme from Sulfurihydrogenibium azorense, structure comparison with the enzyme from Sulfurihydrogenibium yellowstonensis. The active site of each monomer within the dimer is completely accessible to the solvent and, as observed for other alpha-CAs, is located in a cavity which extends from the surface to the center of the protein. On the bottom of this cavity, the catalytic zinc ion is tetrahedrally coordinated by the three histidine residues (His89, His91 and His108). Enzyme SazCA active site structure and environment, important for catalytic activity, overview Sulfurihydrogenibium azorense

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
350000
-
CO2 pH 7.5, 20°C, recombinant His-tagged enzyme Sulfurihydrogenibium azorense