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Literature summary for 4.1.99.3 extracted from

  • Wilson, T.J.; Crystal, M.A.; Rohrbaugh, M.C.; Sokolowsky, K.P.; Gindt, Y.M.
    Evidence from thermodynamics that DNA photolyase recognizes a solvent-exposed CPD lesion (2011), J. Phys. Chem. B, 115, 13746-13754.
    View publication on PubMed

Organism

Organism UniProt Comment Textmining
Escherichia coli
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-
-

Reaction

Reaction Comment Organism Reaction ID
cyclobutadipyrimidine (in DNA) = 2 pyrimidine residues (in DNA) the DNA repair enzyme recognizes a solvent-exposed cyclobutadipyrimidine as part of its damage recognition mechanism Escherichia coli

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
cis,syn-cyclobutane pyrimidine dimer substrate binding and substrate conformation by isothermal titration calorimetry, overview Escherichia coli 2 pyrimidine residues
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?
additional information electrostatic interactions and protonation are affected by the oxidation state of the required FAD cofactor and substrate conformation Escherichia coli ?
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?

Synonyms

Synonyms Comment Organism
DNA photolyase
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Escherichia coli

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
25
-
assay at Escherichia coli

Temperature Range [°C]

Temperature Minimum [°C] Temperature Maximum [°C] Comment Organism
additional information
-
temperature dependence of the binding enthalpy for dsDNA and damaged DNA, overview Escherichia coli

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7
-
assay at Escherichia coli

Cofactor

Cofactor Comment Organism Structure
FAD required Escherichia coli