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Literature summary for 4.1.99.3 extracted from
- UVB sensitivity and cyclobutane pyrimidine dimer (CPD) photolyase genotypes in cultivated and wild rice species (2008), Photochem. Photobiol. Sci., 7, 311-320.
Protein Variants
| Protein Variants | Comment | Organism |
|---|---|---|
| Q126R | the mutation leads to a reduction of enzymatic activity | Oryza sativa Japonica Group |
| Q296H | the mutation leads to a reduction of enzymatic activity | Oryza sativa Japonica Group |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Oryza barthii | - |
strains W0652 and W0698 | - |
| Oryza glaberrima | - |
- |
- |
| Oryza glaberrima C7366 | - |
- |
- |
| Oryza meridionalis | - |
strains W1299 and W1626 | - |
| Oryza rufipogon | - |
strains W0596, W1294, W1729, and W2003 | - |
| Oryza sativa Japonica Group | Q6F6A2 | subspecies Oryza sativa japonica, strains Sasanishiki, Norin 1, and Surjamkhi | - |
Source Tissue
| Source Tissue | Comment | Organism | Textmining |
|---|---|---|---|
| leaf | - |
Oryza rufipogon | - |
| leaf | - |
Oryza glaberrima | - |
| leaf | - |
Oryza barthii | - |
| leaf | - |
Oryza sativa Japonica Group | - |
| leaf | - |
Oryza meridionalis | - |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| cyclobutadipyrimidine in DNA | - |
Oryza rufipogon | pyrimidine residues in DNA | - |
? |  |
| cyclobutadipyrimidine in DNA | - |
Oryza glaberrima | pyrimidine residues in DNA | - |
? | |
| cyclobutadipyrimidine in DNA | - |
Oryza barthii | pyrimidine residues in DNA | - |
? | |
| cyclobutadipyrimidine in DNA | - |
Oryza sativa Japonica Group | pyrimidine residues in DNA | - |
? | |
| cyclobutadipyrimidine in DNA | - |
Oryza meridionalis | pyrimidine residues in DNA | - |
? | |
| cyclobutadipyrimidine in DNA | - |
Oryza glaberrima C7366 | pyrimidine residues in DNA | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| CPD photolyase | - |
Oryza rufipogon |
| CPD photolyase | - |
Oryza glaberrima |
| CPD photolyase | - |
Oryza barthii |
| CPD photolyase | - |
Oryza sativa Japonica Group |
| CPD photolyase | - |
Oryza meridionalis |
| cyclobutane pyrimidine dimer photolyase | - |
Oryza rufipogon |
| cyclobutane pyrimidine dimer photolyase | - |
Oryza glaberrima |
| cyclobutane pyrimidine dimer photolyase | - |
Oryza barthii |
| cyclobutane pyrimidine dimer photolyase | - |
Oryza sativa Japonica Group |
| cyclobutane pyrimidine dimer photolyase | - |
Oryza meridionalis |
Cofactor
| Cofactor | Comment | Organism | Structure |
|---|---|---|---|
| FAD | - |
Oryza rufipogon | |
| FAD | - |
Oryza glaberrima | |
| FAD | - |
Oryza barthii | |
| FAD | - |
Oryza sativa Japonica Group | |
| FAD | - |
Oryza meridionalis | |
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Release 2023.1 (January 2023)
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